RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 MDS2Q8NDY4 140 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 CREB3L4Q8TEY5 395 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 AGAP11Q8TF27 550 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 CA5BP1Q8WTZ4 195 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 ANKRD7Q92527 254 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 ZNF354BQ96LW1 612 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 LPAR4Q99677 370 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 PELI2Q9HAT8 420 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 NPIPA1Q9UND3 350 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 DYRK1BQ9Y463 629 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 OARD1Q9Y530 152 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 PCDHGB6Q9Y5F9 930 aa11.12□□□□□ -0.63
GABPB1-206ENST00000543881 B4GALT2O60909 372 aa11.11□□□□□ -0.63
GABPB1-206ENST00000543881 CD99P14209 185 aa11.11□□□□□ -0.63
GABPB1-206ENST00000543881 ABOP16442 354 aa11.11□□□□□ -0.63
GABPB1-206ENST00000543881 SSTR1P30872 391 aa11.11□□□□□ -0.63
GABPB1-206ENST00000543881 PAFAH1B1P43034 410 aa11.11□□□□□ -0.63
GABPB1-206ENST00000543881 SLC6A12P48065 614 aa11.11□□□□□ -0.63
GABPB1-206ENST00000543881 RBBP5Q15291 538 aaKnown RBP11.11□□□□□ -0.63
GABPB1-206ENST00000543881 SPINK14Q6IE38 97 aa11.11□□□□□ -0.63
GABPB1-206ENST00000543881 C3P1Q6ZMU1 363 aa11.11□□□□□ -0.63
GABPB1-206ENST00000543881 ABHD13Q7L211 337 aa11.11□□□□□ -0.63
GABPB1-206ENST00000543881 ZBED8Q8IZ13 594 aa11.11□□□□□ -0.63
GABPB1-206ENST00000543881 SPATA6LQ8N4H0 392 aa11.11□□□□□ -0.63
GABPB1-206ENST00000543881 TBC1D19Q8N5T2 526 aa11.11□□□□□ -0.63
GABPB1-206ENST00000543881 TRPV3Q8NET8 790 aa11.11□□□□□ -0.63
GABPB1-206ENST00000543881 ELP5Q8TE02 316 aa11.11□□□□□ -0.63
GABPB1-206ENST00000543881 PHF10Q8WUB8 498 aaKnown RBP11.11□□□□□ -0.63
GABPB1-206ENST00000543881 RHBDF1Q96CC6 855 aa11.11□□□□□ -0.63
GABPB1-206ENST00000543881 VPS39Q96JC1 886 aa11.11□□□□□ -0.63
GABPB1-206ENST00000543881 PDLIM2Q96JY6 352 aa11.11□□□□□ -0.63
GABPB1-206ENST00000543881 EGFL8Q99944 293 aa11.11□□□□□ -0.63
GABPB1-206ENST00000543881 AIF1LQ9BQI0 150 aa11.11□□□□□ -0.63
GABPB1-206ENST00000543881 RHOJQ9H4E5 214 aa11.11□□□□□ -0.63
GABPB1-206ENST00000543881 CAB39LQ9H9S4 337 aa11.11□□□□□ -0.63
GABPB1-206ENST00000543881 NECTIN3Q9NQS3 549 aa11.11□□□□□ -0.63
GABPB1-206ENST00000543881 KLHL1Q9NR64 748 aa11.11□□□□□ -0.63
GABPB1-206ENST00000543881 MTO1Q9Y2Z2 717 aaKnown RBP11.11□□□□□ -0.63
GABPB1-206ENST00000543881 KCNE2Q9Y6J6 123 aa11.11□□□□□ -0.63
GABPB1-206ENST00000543881 IGKV3D-11A0A0A0MRZ8 115 aa11.1□□□□□ -0.63
GABPB1-206ENST00000543881 ASPDHA6ND91 283 aa11.1□□□□□ -0.63
GABPB1-206ENST00000543881 E9PLN8 166 aa11.1□□□□□ -0.63
GABPB1-206ENST00000543881 ZNHIT1O43257 154 aa11.1□□□□□ -0.63
GABPB1-206ENST00000543881 PRAMEF4O60810 478 aa11.1□□□□□ -0.63
GABPB1-206ENST00000543881 MAOAP21397 527 aa11.1□□□□□ -0.63
GABPB1-206ENST00000543881 EEF1DP29692 281 aaKnown RBP11.1□□□□□ -0.63
GABPB1-206ENST00000543881 OR1C1Q15619 314 aa11.1□□□□□ -0.63
GABPB1-206ENST00000543881 MEP1AQ16819 746 aa11.1□□□□□ -0.63
GABPB1-206ENST00000543881 TOR1AIP1Q5JTV8 583 aa11.1□□□□□ -0.63
GABPB1-206ENST00000543881 ZNF468Q5VIY5 522 aaPredicted RBP11.1□□□□□ -0.63
GABPB1-206ENST00000543881 PRAMEF9Q5VWM5 478 aa11.1□□□□□ -0.63
GABPB1-206ENST00000543881 SLCO4C1Q6ZQN7 724 aa11.1□□□□□ -0.63
GABPB1-206ENST00000543881 QSOX2Q6ZRP7 698 aa11.1□□□□□ -0.63
GABPB1-206ENST00000543881 DOLPP1Q86YN1 238 aa11.1□□□□□ -0.63
GABPB1-206ENST00000543881 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.1□□□□□ -0.63
GABPB1-206ENST00000543881 KLHDC8AQ8IYD2 350 aa11.1□□□□□ -0.63
GABPB1-206ENST00000543881 MMP21Q8N119 569 aa11.1□□□□□ -0.63
GABPB1-206ENST00000543881 CA13Q8N1Q1 262 aa11.1□□□□□ -0.63
GABPB1-206ENST00000543881 SDCCAG3Q96C92 435 aa11.1□□□□□ -0.63
GABPB1-206ENST00000543881 SCMH1Q96GD3 660 aa11.1□□□□□ -0.63
GABPB1-206ENST00000543881 FRMD6Q96NE9 622 aa11.1□□□□□ -0.63
GABPB1-206ENST00000543881 PTCHD1Q96NR3 888 aa11.1□□□□□ -0.63
GABPB1-206ENST00000543881 DMRTA2Q96SC8 542 aa11.1□□□□□ -0.63
GABPB1-206ENST00000543881 VKORC1Q9BQB6 163 aa11.1□□□□□ -0.63
GABPB1-206ENST00000543881 TMUB1Q9BVT8 246 aa11.1□□□□□ -0.63
GABPB1-206ENST00000543881 DPH5Q9H2P9 285 aa11.1□□□□□ -0.63
GABPB1-206ENST00000543881 CDCP1Q9H5V8 836 aa11.1□□□□□ -0.63
GABPB1-206ENST00000543881 CTNNAL1Q9UBT7 734 aa11.1□□□□□ -0.63
GABPB1-206ENST00000543881 NIPBLQ6KC79 2804 aaeCLIP11.1□□□□□ -0.63
GABPB1-206ENST00000543881 SPG11Q96JI7 2443 aa11.09□□□□□ -0.63
GABPB1-206ENST00000543881 TCRBV16S1A1N1A0A5B0 115 aa11.09□□□□□ -0.63
GABPB1-206ENST00000543881 NCF1BA6NI72 391 aaPredicted RBP11.09□□□□□ -0.63
GABPB1-206ENST00000543881 GABRR3A8MPY1 467 aa11.09□□□□□ -0.63
GABPB1-206ENST00000543881 NCF1CA8MVU1 366 aaPredicted RBP11.09□□□□□ -0.63
GABPB1-206ENST00000543881 TAPBPO15533 448 aa11.09□□□□□ -0.63
GABPB1-206ENST00000543881 ASNA1O43681 348 aa11.09□□□□□ -0.63
GABPB1-206ENST00000543881 PRMT3O60678 531 aa11.09□□□□□ -0.63
GABPB1-206ENST00000543881 NEURL1O76050 574 aa11.09□□□□□ -0.63
GABPB1-206ENST00000543881 WDR47O94967 919 aa11.09□□□□□ -0.63
GABPB1-206ENST00000543881 TBX6O95947 436 aaPredicted RBP11.09□□□□□ -0.63
GABPB1-206ENST00000543881 C1QAP02745 245 aa11.09□□□□□ -0.63
GABPB1-206ENST00000543881 SERPINA6P08185 405 aa11.09□□□□□ -0.63
GABPB1-206ENST00000543881 C1GALT1C1LP0DN25 315 aa11.09□□□□□ -0.63
GABPB1-206ENST00000543881 NCF1P14598 390 aaPredicted RBP11.09□□□□□ -0.63
GABPB1-206ENST00000543881 JAK1P23458 1154 aa11.09□□□□□ -0.63
GABPB1-206ENST00000543881 HNMTP50135 292 aa11.09□□□□□ -0.63
GABPB1-206ENST00000543881 RUNX2Q13950 521 aa11.09□□□□□ -0.63
GABPB1-206ENST00000543881 TGFBIQ15582 683 aa11.09□□□□□ -0.63
GABPB1-206ENST00000543881 FBXO48Q5FWF7 155 aa11.09□□□□□ -0.63
GABPB1-206ENST00000543881 NIPAL1Q6NVV3 410 aa11.09□□□□□ -0.63
GABPB1-206ENST00000543881 ADAMTSL2Q86TH1 951 aa11.09□□□□□ -0.63
GABPB1-206ENST00000543881 SIAH3Q8IW03 269 aa11.09□□□□□ -0.63
GABPB1-206ENST00000543881 CYP4X1Q8N118 509 aa11.09□□□□□ -0.63
GABPB1-206ENST00000543881 GHDCQ8N2G8 530 aa11.09□□□□□ -0.63
GABPB1-206ENST00000543881 NFAM1Q8NET5 270 aaPredicted RBP11.09□□□□□ -0.63
GABPB1-206ENST00000543881 PYROXD1Q8WU10 500 aa11.09□□□□□ -0.63
GABPB1-206ENST00000543881 UTP23Q9BRU9 249 aaKnown RBP11.09□□□□□ -0.63
GABPB1-206ENST00000543881 TMEM79Q9BSE2 394 aa11.09□□□□□ -0.63
GABPB1-206ENST00000543881 DERL2Q9GZP9 239 aa11.09□□□□□ -0.63
GABPB1-206ENST00000543881 RHBGQ9H310 441 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms