RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 WBP2Q969T9 261 aa4.74□□□□□ -1.65
SSR3-208ENST00000496050 CDHR1Q96JP9 859 aa4.74□□□□□ -1.65
SSR3-208ENST00000496050 LRR1Q96L50 414 aa4.74□□□□□ -1.65
SSR3-208ENST00000496050 C2orf48Q96LS8 159 aa4.74□□□□□ -1.65
SSR3-208ENST00000496050 TMEM237Q96Q45 408 aa4.74□□□□□ -1.65
SSR3-208ENST00000496050 ABCG8Q9H221 673 aa4.74□□□□□ -1.65
SSR3-208ENST00000496050 ATAD3AQ9NVI7 634 aa4.74□□□□□ -1.65
SSR3-208ENST00000496050 TRIM10Q9UDY6 481 aa4.74□□□□□ -1.65
SSR3-208ENST00000496050 UBQLN2Q9UHD9 624 aa4.74□□□□□ -1.65
SSR3-208ENST00000496050 EXOC7Q9UPT5 735 aa4.74□□□□□ -1.65
SSR3-208ENST00000496050 LRP12Q9Y561 859 aa4.74□□□□□ -1.65
SSR3-208ENST00000496050 ETV7Q9Y603 341 aa4.74□□□□□ -1.65
SSR3-208ENST00000496050 TEX264Q9Y6I9 313 aa4.74□□□□□ -1.65
SSR3-208ENST00000496050 UMODL1Q5DID0 1318 aa4.73□□□□□ -1.65
SSR3-208ENST00000496050 MEIOCA2RUB1 952 aa4.73□□□□□ -1.65
SSR3-208ENST00000496050 C15orf61A6NNL5 157 aa4.73□□□□□ -1.65
SSR3-208ENST00000496050 RTCAO00442 366 aaKnown RBP4.73□□□□□ -1.65
SSR3-208ENST00000496050 MAGEB2O15479 319 aa4.73□□□□□ -1.65
SSR3-208ENST00000496050 ATP6V1G1O75348 118 aa4.73□□□□□ -1.65
SSR3-208ENST00000496050 SEC22BO75396 215 aa4.73□□□□□ -1.65
SSR3-208ENST00000496050 ODC1P11926 461 aa4.73□□□□□ -1.65
SSR3-208ENST00000496050 ANPEPP15144 967 aa4.73□□□□□ -1.65
SSR3-208ENST00000496050 ITGB6P18564 788 aa4.73□□□□□ -1.65
SSR3-208ENST00000496050 GIFP27352 417 aa4.73□□□□□ -1.65
SSR3-208ENST00000496050 FEN1P39748 380 aaKnown RBP4.73□□□□□ -1.65
SSR3-208ENST00000496050 SLC12A3P55017 1021 aa4.73□□□□□ -1.65
SSR3-208ENST00000496050 GPR50Q13585 617 aa4.73□□□□□ -1.65
SSR3-208ENST00000496050 SPHARQ15513 63 aa4.73□□□□□ -1.65
SSR3-208ENST00000496050 PKN2Q16513 984 aaKnown RBP4.73□□□□□ -1.65
SSR3-208ENST00000496050 STX1AQ16623 288 aa4.73□□□□□ -1.65
SSR3-208ENST00000496050 ZNF619Q8N2I2 560 aa4.73□□□□□ -1.65
SSR3-208ENST00000496050 URGCPQ8TCY9 931 aa4.73□□□□□ -1.65
SSR3-208ENST00000496050 UBTD2Q8WUN7 234 aa4.73□□□□□ -1.65
SSR3-208ENST00000496050 DNASE2BQ8WZ79 361 aa4.73□□□□□ -1.65
SSR3-208ENST00000496050 SLC35C1Q96A29 364 aa4.73□□□□□ -1.65
SSR3-208ENST00000496050 ZNF274Q96GC6 653 aaPredicted RBP4.73□□□□□ -1.65
SSR3-208ENST00000496050 ZNF486Q96H40 463 aaPredicted RBP4.73□□□□□ -1.65
SSR3-208ENST00000496050 CLEC7AQ9BXN2 247 aa4.73□□□□□ -1.65
SSR3-208ENST00000496050 HOXD1Q9GZZ0 328 aa4.73□□□□□ -1.65
SSR3-208ENST00000496050 MTHFD2LQ9H903 347 aaPredicted RBP4.73□□□□□ -1.65
SSR3-208ENST00000496050 GPN1Q9HCN4 374 aaPredicted RBP4.73□□□□□ -1.65
SSR3-208ENST00000496050 PSORS1C1Q9UIG5 152 aa4.73□□□□□ -1.65
SSR3-208ENST00000496050 TRMT6Q9UJA5 497 aaKnown RBP4.73□□□□□ -1.65
SSR3-208ENST00000496050 PPP1R3CQ9UQK1 317 aa4.73□□□□□ -1.65
SSR3-208ENST00000496050 RPH3AQ9Y2J0 694 aaPredicted RBP4.73□□□□□ -1.65
SSR3-208ENST00000496050 SH3GLB1Q9Y371 365 aa4.73□□□□□ -1.65
SSR3-208ENST00000496050 IQCMA0A1B0GVH7 501 aa4.72□□□□□ -1.65
SSR3-208ENST00000496050 CHUKO15111 745 aa4.72□□□□□ -1.65
SSR3-208ENST00000496050 SURF4O15260 269 aa4.72□□□□□ -1.65
SSR3-208ENST00000496050 MAGEC1O60732 1142 aa4.72□□□□□ -1.65
SSR3-208ENST00000496050 CEACAM4O75871 244 aa4.72□□□□□ -1.65
SSR3-208ENST00000496050 CPNE6O95741 557 aa4.72□□□□□ -1.65
SSR3-208ENST00000496050 ABHD2P08910 425 aa4.72□□□□□ -1.65
SSR3-208ENST00000496050 AREGP15514 252 aa4.72□□□□□ -1.65
SSR3-208ENST00000496050 GAP43P17677 238 aa4.72□□□□□ -1.65
SSR3-208ENST00000496050 UGT1A6P19224 532 aa4.72□□□□□ -1.65
SSR3-208ENST00000496050 ACKR3P25106 362 aa4.72□□□□□ -1.65
SSR3-208ENST00000496050 CCR4P51679 360 aa4.72□□□□□ -1.65
SSR3-208ENST00000496050 CASP9P55211 416 aa4.72□□□□□ -1.65
SSR3-208ENST00000496050 GUCY2DQ02846 1103 aa4.72□□□□□ -1.65
SSR3-208ENST00000496050 PPP1R8Q12972 351 aaKnown RBP4.72□□□□□ -1.65
SSR3-208ENST00000496050 GK2Q14410 553 aaPredicted RBP4.72□□□□□ -1.65
SSR3-208ENST00000496050 HLA-BQ31612 363 aa4.72□□□□□ -1.65
SSR3-208ENST00000496050 LCE1AQ5T7P2 110 aa4.72□□□□□ -1.65
SSR3-208ENST00000496050 LYPLAL1Q5VWZ2 237 aa4.72□□□□□ -1.65
SSR3-208ENST00000496050 ARHGAP17Q68EM7 881 aa4.72□□□□□ -1.65
SSR3-208ENST00000496050 KLHDC8BQ8IXV7 354 aa4.72□□□□□ -1.65
SSR3-208ENST00000496050 BATF2Q8N1L9 274 aa4.72□□□□□ -1.65
SSR3-208ENST00000496050 SLC43A2Q8N370 569 aa4.72□□□□□ -1.65
SSR3-208ENST00000496050 TRPV3Q8NET8 790 aa4.72□□□□□ -1.65
SSR3-208ENST00000496050 EXOC6Q8TAG9 804 aa4.72□□□□□ -1.65
SSR3-208ENST00000496050 CD99L2Q8TCZ2 262 aa4.72□□□□□ -1.65
SSR3-208ENST00000496050 PRCCQ92733 491 aaPredicted RBP4.72□□□□□ -1.65
SSR3-208ENST00000496050 SLCO4A1Q96BD0 722 aa4.72□□□□□ -1.65
SSR3-208ENST00000496050 PAPOLGQ9BWT3 736 aaKnown RBP4.72□□□□□ -1.65
SSR3-208ENST00000496050 WDR13Q9H1Z4 485 aa4.72□□□□□ -1.65
SSR3-208ENST00000496050 C3orf14Q9HBI5 128 aa4.72□□□□□ -1.65
SSR3-208ENST00000496050 PLEK2Q9NYT0 353 aa4.72□□□□□ -1.65
SSR3-208ENST00000496050 ZNF319Q9P2F9 582 aa4.72□□□□□ -1.65
SSR3-208ENST00000496050 HOOK1Q9UJC3 728 aaKnown RBP4.72□□□□□ -1.65
SSR3-208ENST00000496050 PILRAQ9UKJ1 303 aa4.72□□□□□ -1.65
SSR3-208ENST00000496050 PLCL2Q9UPR0 1127 aa4.72□□□□□ -1.65
SSR3-208ENST00000496050 NEDD4P46934 1319 aa4.72□□□□□ -1.65
SSR3-208ENST00000496050 RNF103-CHMP3A0A140T963 221 aa4.71□□□□□ -1.66
SSR3-208ENST00000496050 A0A1W2PR80 420 aa4.71□□□□□ -1.66
SSR3-208ENST00000496050 TLR4O00206 839 aa4.71□□□□□ -1.66
SSR3-208ENST00000496050 RNF103O00237 685 aa4.71□□□□□ -1.66
SSR3-208ENST00000496050 SLC28A1O00337 649 aa4.71□□□□□ -1.66
SSR3-208ENST00000496050 NXPH2O95156 264 aa4.71□□□□□ -1.66
SSR3-208ENST00000496050 IGHEP01854 428 aa4.71□□□□□ -1.66
SSR3-208ENST00000496050 CHRNGP07510 517 aa4.71□□□□□ -1.66
SSR3-208ENST00000496050 CCDC192P0DO97 292 aa4.71□□□□□ -1.66
SSR3-208ENST00000496050 HOXB6P17509 224 aaKnown RBP4.71□□□□□ -1.66
SSR3-208ENST00000496050 NSFP46459 744 aaKnown RBP4.71□□□□□ -1.66
SSR3-208ENST00000496050 KCNK10P57789 538 aa4.71□□□□□ -1.66
SSR3-208ENST00000496050 STARD6P59095 220 aa4.71□□□□□ -1.66
SSR3-208ENST00000496050 SMC1AQ14683 1233 aaKnown RBP4.71□□□□□ -1.66
SSR3-208ENST00000496050 PARP10Q53GL7 1025 aa4.71□□□□□ -1.66
SSR3-208ENST00000496050 PWWP2BQ6NUJ5 590 aa4.71□□□□□ -1.66
SSR3-208ENST00000496050 TMEM64Q6YI46 380 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms