RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 APOBEC3AP31941 199 aaPredicted RBP4.65□□□□□ -1.66
GABPB1-204ENST00000396464 NUMBP49757 651 aa4.65□□□□□ -1.66
GABPB1-204ENST00000396464 BLVRAP53004 296 aa4.65□□□□□ -1.66
GABPB1-204ENST00000396464 SOX10P56693 466 aa4.65□□□□□ -1.66
GABPB1-204ENST00000396464 CYP4F2P78329 520 aa4.65□□□□□ -1.66
GABPB1-204ENST00000396464 FGL1Q08830 312 aa4.65□□□□□ -1.66
GABPB1-204ENST00000396464 PMPCAQ10713 525 aa4.65□□□□□ -1.66
GABPB1-204ENST00000396464 SLAQ13239 276 aa4.65□□□□□ -1.66
GABPB1-204ENST00000396464 ALKBH6Q3KRA9 238 aa4.65□□□□□ -1.66
GABPB1-204ENST00000396464 PDCD4Q53EL6 469 aaKnown RBP4.65□□□□□ -1.66
GABPB1-204ENST00000396464 AGKQ53H12 422 aa4.65□□□□□ -1.66
GABPB1-204ENST00000396464 HSP90AA4PQ58FG1 418 aa4.65□□□□□ -1.66
GABPB1-204ENST00000396464 NKAIN2Q5VXU1 208 aa4.65□□□□□ -1.66
GABPB1-204ENST00000396464 ZDHHC20Q5W0Z9 365 aa4.65□□□□□ -1.66
GABPB1-204ENST00000396464 SP5Q6BEB4 398 aaPredicted RBP4.65□□□□□ -1.66
GABPB1-204ENST00000396464 ATL3Q6DD88 541 aa4.65□□□□□ -1.66
GABPB1-204ENST00000396464 SLC39A4Q6P5W5 647 aa4.65□□□□□ -1.66
GABPB1-204ENST00000396464 CD164L2Q6UWJ8 174 aa4.65□□□□□ -1.66
GABPB1-204ENST00000396464 EIF3MQ7L2H7 374 aaKnown RBP4.65□□□□□ -1.66
GABPB1-204ENST00000396464 PAQR7Q86WK9 346 aa4.65□□□□□ -1.66
GABPB1-204ENST00000396464 PRIMA1Q86XR5 153 aa4.65□□□□□ -1.66
GABPB1-204ENST00000396464 VSTM4Q8IW00 320 aa4.65□□□□□ -1.66
GABPB1-204ENST00000396464 ASCC1Q8N9N2 400 aaKnown RBP4.65□□□□□ -1.66
GABPB1-204ENST00000396464 MCPH1Q8NEM0 835 aa4.65□□□□□ -1.66
GABPB1-204ENST00000396464 KCNG3Q8TAE7 436 aa4.65□□□□□ -1.66
GABPB1-204ENST00000396464 FAM81AQ8TBF8 368 aa4.65□□□□□ -1.66
GABPB1-204ENST00000396464 MYCBPAPQ8TBZ2 947 aa4.65□□□□□ -1.66
GABPB1-204ENST00000396464 PAQR8Q8TEZ7 354 aa4.65□□□□□ -1.66
GABPB1-204ENST00000396464 PRRC1Q96M27 445 aa4.65□□□□□ -1.66
GABPB1-204ENST00000396464 ZNF582Q96NG8 517 aaPredicted RBP4.65□□□□□ -1.66
GABPB1-204ENST00000396464 ZNF570Q96NI8 536 aa4.65□□□□□ -1.66
GABPB1-204ENST00000396464 VPS35Q96QK1 796 aa4.65□□□□□ -1.66
GABPB1-204ENST00000396464 SLC22A12Q96S37 553 aa4.65□□□□□ -1.66
GABPB1-204ENST00000396464 TEX101Q9BY14 249 aa4.65□□□□□ -1.66
GABPB1-204ENST00000396464 PPP1R3EQ9H7J1 279 aa4.65□□□□□ -1.66
GABPB1-204ENST00000396464 RAB18Q9NP72 206 aa4.65□□□□□ -1.66
GABPB1-204ENST00000396464 CHRAC1Q9NRG0 131 aa4.65□□□□□ -1.66
GABPB1-204ENST00000396464 TXNDC16Q9P2K2 825 aa4.65□□□□□ -1.66
GABPB1-204ENST00000396464 STX18Q9P2W9 335 aaKnown RBP4.65□□□□□ -1.66
GABPB1-204ENST00000396464 CD300AQ9UGN4 299 aa4.65□□□□□ -1.66
GABPB1-204ENST00000396464 PSORS1C1Q9UIG5 152 aa4.65□□□□□ -1.66
GABPB1-204ENST00000396464 SPATA31A6Q5VVP1 1343 aa4.65□□□□□ -1.67
GABPB1-204ENST00000396464 SH3TC1Q8TE82 1336 aa4.65□□□□□ -1.67
GABPB1-204ENST00000396464 TRAV26-1A0A087WT03 109 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 METTL21EPA6NDL7 271 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 EEF2KO00418 725 aaKnown RBP4.64□□□□□ -1.67
GABPB1-204ENST00000396464 TRDMT1O14717 391 aaKnown RBP4.64□□□□□ -1.67
GABPB1-204ENST00000396464 TLX3O43711 291 aaPredicted RBP4.64□□□□□ -1.67
GABPB1-204ENST00000396464 LCMT2O60294 686 aaKnown RBP4.64□□□□□ -1.67
GABPB1-204ENST00000396464 NEBLO76041 1014 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 RGS11O94810 467 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 SORBS2O94875 1100 aaKnown RBP4.64□□□□□ -1.67
GABPB1-204ENST00000396464 TMCC1O94876 653 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 NDUFA10O95299 355 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 PIGNO95427 931 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 SYNGR4O95473 234 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 CPNE6O95741 557 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 IGHV2-70P01814 119 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 KRT19P08727 400 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 IGFBP1P08833 259 aaPredicted RBP4.64□□□□□ -1.67
GABPB1-204ENST00000396464 TFPIP10646 304 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 TPSB2P20231 275 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 PTGER4P35408 488 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 TRIM23P36406 574 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 ALDH3B1P43353 468 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 SLC9A3P48764 834 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 BCAP31P51572 246 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 CCR4P51679 360 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 COPB1P53618 953 aaKnown RBP4.64□□□□□ -1.67
GABPB1-204ENST00000396464 FKBP1BP68106 108 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 CSNK2A1P68400 391 aaPredicted RBP4.64□□□□□ -1.67
GABPB1-204ENST00000396464 MRPS15P82914 257 aaKnown RBP4.64□□□□□ -1.67
GABPB1-204ENST00000396464 NCBP1Q09161 790 aaKnown RBP4.64□□□□□ -1.67
GABPB1-204ENST00000396464 HYAL1Q12794 435 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 TROAPQ12815 778 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 KEAP1Q14145 624 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 NCF4Q15080 339 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 P2RY14Q15391 338 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 TPSAB1Q15661 275 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 NPTX1Q15818 432 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 HKDC1Q2TB90 917 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 ZNF829Q3KNS6 432 aaPredicted RBP4.64□□□□□ -1.67
GABPB1-204ENST00000396464 RNASE12Q5GAN4 147 aaKnown RBP4.64□□□□□ -1.67
GABPB1-204ENST00000396464 LIPKQ5VXJ0 399 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 RGMBQ6NW40 437 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 Q6ZPB1 254 aaPredicted RBP4.64□□□□□ -1.67
GABPB1-204ENST00000396464 C16orf62Q7Z3J2 963 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 AMIGO1Q86WK6 493 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 CHSY1Q86X52 802 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 SFTPA1Q8IWL2 248 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 ZNF683Q8IZ20 524 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 SPATA6LQ8N4H0 392 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 CSNK2A3Q8NEV1 391 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 GPRC5AQ8NFJ5 357 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 ZNF596Q8TC21 504 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 PYCR2Q96C36 320 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 ZNF479Q96JC4 524 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 MARK4Q96L34 752 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 CASD1Q96PB1 797 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 MMS19Q96T76 1030 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms