RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 NXPE4Q6UWF7 544 aa8.13□□□□□ -1.11
PTPRK-206ENST00000368215 USP30Q70CQ3 517 aa8.13□□□□□ -1.11
PTPRK-206ENST00000368215 ZNF683Q8IZ20 524 aa8.13□□□□□ -1.11
PTPRK-206ENST00000368215 ZNF655Q8N720 491 aaPredicted RBP8.13□□□□□ -1.11
PTPRK-206ENST00000368215 RASGEF1AQ8N9B8 481 aa8.13□□□□□ -1.11
PTPRK-206ENST00000368215 TAMM41Q96BW9 452 aa8.13□□□□□ -1.11
PTPRK-206ENST00000368215 ZNF689Q96CS4 500 aaPredicted RBP8.13□□□□□ -1.11
PTPRK-206ENST00000368215 PALMDQ9NP74 551 aa8.13□□□□□ -1.11
PTPRK-206ENST00000368215 FZD3Q9NPG1 666 aa8.13□□□□□ -1.11
PTPRK-206ENST00000368215 SNTG1Q9NSN8 517 aa8.13□□□□□ -1.11
PTPRK-206ENST00000368215 TMEM9Q9P0T7 183 aa8.13□□□□□ -1.11
PTPRK-206ENST00000368215 FER1L6Q2WGJ9 1857 aa8.13□□□□□ -1.11
PTPRK-206ENST00000368215 GABRR3A8MPY1 467 aa8.13□□□□□ -1.11
PTPRK-206ENST00000368215 IHHQ14623 411 aa8.13□□□□□ -1.11
PTPRK-206ENST00000368215 PYDC2Q56P42 97 aa8.13□□□□□ -1.11
PTPRK-206ENST00000368215 XKR7Q5GH72 579 aa8.13□□□□□ -1.11
PTPRK-206ENST00000368215 NHSL2Q5HYW2 709 aa8.13□□□□□ -1.11
PTPRK-206ENST00000368215 REEP3Q6NUK4 255 aa8.13□□□□□ -1.11
PTPRK-206ENST00000368215 CDC73Q6P1J9 531 aa8.13□□□□□ -1.11
PTPRK-206ENST00000368215 RNF44Q7L0R7 432 aa8.13□□□□□ -1.11
PTPRK-206ENST00000368215 CCDC116Q8IYX3 515 aa8.13□□□□□ -1.11
PTPRK-206ENST00000368215 CHCHD4Q8N4Q1 142 aa8.13□□□□□ -1.11
PTPRK-206ENST00000368215 ZNF548Q8NEK5 533 aaPredicted RBP8.13□□□□□ -1.11
PTPRK-206ENST00000368215 ZNF420Q8TAQ5 688 aaPredicted RBP8.13□□□□□ -1.11
PTPRK-206ENST00000368215 LRIG1Q96JA1 1093 aa8.13□□□□□ -1.11
PTPRK-206ENST00000368215 DNMT3BQ9UBC3 853 aaKnown RBP8.13□□□□□ -1.11
PTPRK-206ENST00000368215 ABCD2Q9UBJ2 740 aa8.13□□□□□ -1.11
PTPRK-206ENST00000368215 ABCG2Q9UNQ0 655 aa8.13□□□□□ -1.11
PTPRK-206ENST00000368215 NEU3Q9UQ49 428 aa8.13□□□□□ -1.11
PTPRK-206ENST00000368215 SMIM30A4D0T7 59 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 M0R129 80 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 TLR4O00206 839 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 VILLO15195 856 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 KMOO15229 486 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 SNX4O95219 450 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 APOL3O95236 402 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 RETP07949 1114 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 SMIM18P0DKX4 95 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 LAMP2P13473 410 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 ADRB3P13945 408 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 CSNK2A2P19784 350 aaPredicted RBP8.12□□□□□ -1.11
PTPRK-206ENST00000368215 BTN3A2P78410 334 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 ID2Q02363 134 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 TBPL2Q6SJ96 375 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 DCP2Q8IU60 420 aaKnown RBP8.12□□□□□ -1.11
PTPRK-206ENST00000368215 UBE2J2Q8N2K1 259 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 RELTQ969Z4 430 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 ISG20Q96AZ6 181 aaKnown RBP8.12□□□□□ -1.11
PTPRK-206ENST00000368215 PHF21AQ96BD5 680 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 CPEB1Q9BZB8 566 aaKnown RBP8.12□□□□□ -1.11
PTPRK-206ENST00000368215 P2RX2Q9UBL9 471 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 RBMX2Q9Y388 322 aaKnown RBP8.12□□□□□ -1.11
PTPRK-206ENST00000368215 HCN4Q9Y3Q4 1203 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 ARID2Q68CP9 1835 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 CEP290O15078 2479 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 PAPPA2Q9BXP8 1791 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 TMEM202A6NGA9 273 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 H3BMQ9 156 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 CASKO14936 926 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 OR12D1P0DN82 309 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 PFKLP17858 780 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 RPL4P36578 427 aaKnown RBP8.12□□□□□ -1.11
PTPRK-206ENST00000368215 SLC6A11P48066 632 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 STXBP1P61764 594 aaKnown RBP8.12□□□□□ -1.11
PTPRK-206ENST00000368215 ILF3Q12906 894 aaKnown RBP eCLIP8.12□□□□□ -1.11
PTPRK-206ENST00000368215 ZNHIT3Q15649 155 aaPredicted RBP8.12□□□□□ -1.11
PTPRK-206ENST00000368215 TSTQ16762 297 aaKnown RBP8.12□□□□□ -1.11
PTPRK-206ENST00000368215 ZNF829Q3KNS6 432 aaPredicted RBP8.12□□□□□ -1.11
PTPRK-206ENST00000368215 TOR1AIP1Q5JTV8 583 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 CCSAPQ6IQ19 270 aaPredicted RBP8.12□□□□□ -1.11
PTPRK-206ENST00000368215 GRHL2Q6ISB3 625 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 TAF8Q7Z7C8 310 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 IQCHQ86VS3 1027 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 WDR48Q8TAF3 677 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 C16orf78Q8WTQ4 265 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 ZNF480Q8WV37 535 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 RASSF5Q8WWW0 418 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 COG8Q96MW5 612 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 FCRL4Q96PJ5 515 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 ITPAQ9BY32 194 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 NDRG2Q9UN36 371 aaKnown RBP8.12□□□□□ -1.11
PTPRK-206ENST00000368215 HS3ST2Q9Y278 367 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 H3BNC9 293 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 EIF3FO00303 357 aaPredicted RBP8.12□□□□□ -1.11
PTPRK-206ENST00000368215 SNPHO15079 494 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 MID1O15344 667 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 CAPN5O15484 640 aaPredicted RBP8.12□□□□□ -1.11
PTPRK-206ENST00000368215 TLX2O43763 284 aaPredicted RBP8.12□□□□□ -1.11
PTPRK-206ENST00000368215 TSPAN12O95859 305 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 HSD3B1P14060 373 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 HSD3B2P26439 372 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 CSNK1DP48730 415 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 KHKP50053 298 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 RNF144AP50876 292 aaPredicted RBP8.12□□□□□ -1.11
PTPRK-206ENST00000368215 CSNK2BP67870 215 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 ST3GAL4Q11206 333 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 NFATC3Q12968 1075 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 RGNQ15493 299 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 MOGQ16653 247 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 PPP2R2DQ66LE6 453 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 155.5 ms