RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 PCSK2P16519 638 aa14.09□□□□□ -0.15
TOP3B-201ENST00000357179 SSTR4P31391 388 aa14.09□□□□□ -0.15
TOP3B-201ENST00000357179 CDH4P55283 916 aa14.09□□□□□ -0.15
TOP3B-201ENST00000357179 RHAGQ02094 409 aa14.09□□□□□ -0.15
TOP3B-201ENST00000357179 CACNG1Q06432 222 aa14.09□□□□□ -0.15
TOP3B-201ENST00000357179 DBPQ10586 325 aaPredicted RBP14.09□□□□□ -0.15
TOP3B-201ENST00000357179 USP39Q53GS9 565 aaKnown RBP14.09□□□□□ -0.15
TOP3B-201ENST00000357179 CERS6Q6ZMG9 384 aa14.09□□□□□ -0.15
TOP3B-201ENST00000357179 CLHC1Q8NHS4 586 aa14.09□□□□□ -0.15
TOP3B-201ENST00000357179 UBTD2Q8WUN7 234 aa14.09□□□□□ -0.15
TOP3B-201ENST00000357179 AKAP1Q92667 903 aaKnown RBP eCLIP14.09□□□□□ -0.15
TOP3B-201ENST00000357179 ADAM2Q99965 735 aa14.09□□□□□ -0.15
TOP3B-201ENST00000357179 LRTM1Q9HBL6 345 aa14.09□□□□□ -0.15
TOP3B-201ENST00000357179 GALNT9Q9HCQ5 603 aa14.09□□□□□ -0.15
TOP3B-201ENST00000357179 TMEM184CQ9NVA4 438 aa14.09□□□□□ -0.15
TOP3B-201ENST00000357179 NLKQ9UBE8 527 aa14.09□□□□□ -0.15
TOP3B-201ENST00000357179 SRRDQ9UH36 339 aa14.09□□□□□ -0.15
TOP3B-201ENST00000357179 STUB1Q9UNE7 303 aa14.09□□□□□ -0.15
TOP3B-201ENST00000357179 DUSP12Q9UNI6 340 aa14.09□□□□□ -0.15
TOP3B-201ENST00000357179 ACTL7AQ9Y615 435 aa14.09□□□□□ -0.15
TOP3B-201ENST00000357179 GREB1Q4ZG55 1949 aa14.09□□□□□ -0.15
TOP3B-201ENST00000357179 HYKKA2RU49 373 aa14.08□□□□□ -0.15
TOP3B-201ENST00000357179 TAPBPO15533 448 aa14.08□□□□□ -0.15
TOP3B-201ENST00000357179 FABP7O15540 132 aa14.08□□□□□ -0.15
TOP3B-201ENST00000357179 ORC5O43913 435 aa14.08□□□□□ -0.15
TOP3B-201ENST00000357179 F11P03951 625 aa14.08□□□□□ -0.15
TOP3B-201ENST00000357179 IFNA16P05015 189 aa14.08□□□□□ -0.15
TOP3B-201ENST00000357179 TPOP07202 933 aa14.08□□□□□ -0.15
TOP3B-201ENST00000357179 SOX3P41225 446 aa14.08□□□□□ -0.15
TOP3B-201ENST00000357179 MAN2A2P49641 1150 aa14.08□□□□□ -0.15
TOP3B-201ENST00000357179 HMGCS1Q01581 520 aa14.08□□□□□ -0.15
TOP3B-201ENST00000357179 POU4F3Q15319 338 aa14.08□□□□□ -0.15
TOP3B-201ENST00000357179 GRK1Q15835 563 aa14.08□□□□□ -0.15
TOP3B-201ENST00000357179 CCL14Q16627 93 aa14.08□□□□□ -0.15
TOP3B-201ENST00000357179 CLLU1Q5K131 121 aa14.08□□□□□ -0.15
TOP3B-201ENST00000357179 SHEQ5VZ18 495 aa14.08□□□□□ -0.15
TOP3B-201ENST00000357179 ANKRD46Q86W74 232 aa14.08□□□□□ -0.15
TOP3B-201ENST00000357179 ADGRG3Q86Y34 549 aa14.08□□□□□ -0.15
TOP3B-201ENST00000357179 FAM217AQ8IXS0 508 aa14.08□□□□□ -0.15
TOP3B-201ENST00000357179 GHDCQ8N2G8 530 aa14.08□□□□□ -0.15
TOP3B-201ENST00000357179 NTMT1Q9BV86 223 aa14.08□□□□□ -0.15
TOP3B-201ENST00000357179 IMPAD1Q9NX62 359 aa14.08□□□□□ -0.15
TOP3B-201ENST00000357179 SH3BP4Q9P0V3 963 aa14.08□□□□□ -0.15
TOP3B-201ENST00000357179 PLEKHB1Q9UF11 243 aaPredicted RBP14.08□□□□□ -0.15
TOP3B-201ENST00000357179 ATPIF1Q9UII2 106 aa14.08□□□□□ -0.15
TOP3B-201ENST00000357179 ZMYM5Q9UJ78 669 aa14.08□□□□□ -0.15
TOP3B-201ENST00000357179 LSM2Q9Y333 95 aaKnown RBP14.08□□□□□ -0.15
TOP3B-201ENST00000357179 FAM240BA0A1B0GVZ2 78 aa14.08□□□□□ -0.16
TOP3B-201ENST00000357179 SH3D21A4FU49 640 aa14.08□□□□□ -0.16
TOP3B-201ENST00000357179 M0R129 80 aa14.08□□□□□ -0.16
TOP3B-201ENST00000357179 ULK1O75385 1050 aa14.08□□□□□ -0.16
TOP3B-201ENST00000357179 EBLN1P0CF75 366 aa14.08□□□□□ -0.16
TOP3B-201ENST00000357179 S100A3P33764 101 aa14.08□□□□□ -0.16
TOP3B-201ENST00000357179 DSTNP60981 165 aa14.08□□□□□ -0.16
TOP3B-201ENST00000357179 ABATP80404 500 aa14.08□□□□□ -0.16
TOP3B-201ENST00000357179 TAF10Q12962 218 aa14.08□□□□□ -0.16
TOP3B-201ENST00000357179 GPR139Q6DWJ6 353 aa14.08□□□□□ -0.16
TOP3B-201ENST00000357179 PDE12Q6L8Q7 609 aaKnown RBP14.08□□□□□ -0.16
TOP3B-201ENST00000357179 KLHL17Q6TDP4 642 aa14.08□□□□□ -0.16
TOP3B-201ENST00000357179 C16orf62Q7Z3J2 963 aa14.08□□□□□ -0.16
TOP3B-201ENST00000357179 TRIM69Q86WT6 500 aa14.08□□□□□ -0.16
TOP3B-201ENST00000357179 SLC5A8Q8N695 610 aa14.08□□□□□ -0.16
TOP3B-201ENST00000357179 CLDN22Q8N7P3 220 aa14.08□□□□□ -0.16
TOP3B-201ENST00000357179 ATP6V1C2Q8NEY4 427 aa14.08□□□□□ -0.16
TOP3B-201ENST00000357179 UTP15Q8TED0 518 aaKnown RBP14.08□□□□□ -0.16
TOP3B-201ENST00000357179 FAM126AQ9BYI3 521 aaPredicted RBP14.08□□□□□ -0.16
TOP3B-201ENST00000357179 ZC4H2Q9NQZ6 224 aa14.08□□□□□ -0.16
TOP3B-201ENST00000357179 POFUT2Q9Y2G5 429 aa14.08□□□□□ -0.16
TOP3B-201ENST00000357179 PCDH17O14917 1159 aa14.08□□□□□ -0.16
TOP3B-201ENST00000357179 KCNK5O95279 499 aa14.08□□□□□ -0.16
TOP3B-201ENST00000357179 B3GALT4O96024 378 aa14.08□□□□□ -0.16
TOP3B-201ENST00000357179 PRKAR1AP10644 381 aa14.08□□□□□ -0.16
TOP3B-201ENST00000357179 HSPA7P48741 367 aa14.08□□□□□ -0.16
TOP3B-201ENST00000357179 RGS4P49798 205 aa14.08□□□□□ -0.16
TOP3B-201ENST00000357179 FLYWCH1Q4VC44 716 aa14.08□□□□□ -0.16
TOP3B-201ENST00000357179 DDI2Q5TDH0 399 aa14.08□□□□□ -0.16
TOP3B-201ENST00000357179 HSDL2Q6YN16 418 aa14.08□□□□□ -0.16
TOP3B-201ENST00000357179 FAM9CQ8IZT9 166 aa14.08□□□□□ -0.16
TOP3B-201ENST00000357179 CFAP52Q8N1V2 620 aa14.08□□□□□ -0.16
TOP3B-201ENST00000357179 SLC37A3Q8NCC5 494 aa14.08□□□□□ -0.16
TOP3B-201ENST00000357179 C19orf18Q8NEA5 215 aa14.08□□□□□ -0.16
TOP3B-201ENST00000357179 USP7Q93009 1102 aa14.08□□□□□ -0.16
TOP3B-201ENST00000357179 SAMD11Q96NU1 681 aa14.08□□□□□ -0.16
TOP3B-201ENST00000357179 CD244Q9BZW8 370 aa14.08□□□□□ -0.16
TOP3B-201ENST00000357179 NSUN3Q9H649 340 aaKnown RBP14.08□□□□□ -0.16
TOP3B-201ENST00000357179 SLC6A14Q9UN76 642 aa14.08□□□□□ -0.16
TOP3B-201ENST00000357179 SCN10AQ9Y5Y9 1956 aa14.07□□□□□ -0.16
TOP3B-201ENST00000357179 MYADML2A6NDP7 307 aa14.07□□□□□ -0.16
TOP3B-201ENST00000357179 IQCF5A8MTL0 148 aa14.07□□□□□ -0.16
TOP3B-201ENST00000357179 H3BNC9 293 aa14.07□□□□□ -0.16
TOP3B-201ENST00000357179 ACSL4O60488 711 aa14.07□□□□□ -0.16
TOP3B-201ENST00000357179 ATG13O75143 517 aa14.07□□□□□ -0.16
TOP3B-201ENST00000357179 PPM1BO75688 479 aa14.07□□□□□ -0.16
TOP3B-201ENST00000357179 CDRT1O95170 752 aa14.07□□□□□ -0.16
TOP3B-201ENST00000357179 IL1AP01583 271 aa14.07□□□□□ -0.16
TOP3B-201ENST00000357179 IGHA2P01877 340 aa14.07□□□□□ -0.16
TOP3B-201ENST00000357179 RRASP10301 218 aa14.07□□□□□ -0.16
TOP3B-201ENST00000357179 BCKDHAP12694 445 aa14.07□□□□□ -0.16
TOP3B-201ENST00000357179 WEE1P30291 646 aa14.07□□□□□ -0.16
TOP3B-201ENST00000357179 MXD1Q05195 221 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms