RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 NOXRED1Q6NXP6 359 aa14.01□□□□□ -0.17
CXCL12-201ENST00000343575 ZCCHC8Q6NZY4 707 aaKnown RBP14.01□□□□□ -0.17
CXCL12-201ENST00000343575 ZC3H14Q6PJT7 736 aaKnown RBP14.01□□□□□ -0.17
CXCL12-201ENST00000343575 UBE3DQ7Z6J8 389 aa14.01□□□□□ -0.17
CXCL12-201ENST00000343575 MIER2Q8N344 545 aa14.01□□□□□ -0.17
CXCL12-201ENST00000343575 LIX1Q8N485 282 aa14.01□□□□□ -0.17
CXCL12-201ENST00000343575 C1orf52Q8N6N3 182 aaKnown RBP14.01□□□□□ -0.17
CXCL12-201ENST00000343575 TRIML2Q8N7C3 387 aa14.01□□□□□ -0.17
CXCL12-201ENST00000343575 BAHD1Q8TBE0 780 aaPredicted RBP14.01□□□□□ -0.17
CXCL12-201ENST00000343575 OR2A5Q96R48 311 aa14.01□□□□□ -0.17
CXCL12-201ENST00000343575 F2RL3Q96RI0 385 aa14.01□□□□□ -0.17
CXCL12-201ENST00000343575 LHX9Q9NQ69 397 aa14.01□□□□□ -0.17
CXCL12-201ENST00000343575 DDX18Q9NVP1 670 aaKnown RBP14.01□□□□□ -0.17
CXCL12-201ENST00000343575 SIRT5Q9NXA8 310 aa14.01□□□□□ -0.17
CXCL12-201ENST00000343575 SH3GLB1Q9Y371 365 aa14.01□□□□□ -0.17
CXCL12-201ENST00000343575 AP1M2Q9Y6Q5 423 aa14.01□□□□□ -0.17
CXCL12-201ENST00000343575 UNC13CQ8NB66 2214 aa14.01□□□□□ -0.17
CXCL12-201ENST00000343575 A0A0J9YY10 115 aa14.01□□□□□ -0.17
CXCL12-201ENST00000343575 RHPN2P1A8MT19 583 aa14.01□□□□□ -0.17
CXCL12-201ENST00000343575 C4orf51C9J302 202 aa14.01□□□□□ -0.17
CXCL12-201ENST00000343575 FBP2O00757 339 aa14.01□□□□□ -0.17
CXCL12-201ENST00000343575 CBFA2T3O75081 653 aa14.01□□□□□ -0.17
CXCL12-201ENST00000343575 CLEC3AO75596 197 aa14.01□□□□□ -0.17
CXCL12-201ENST00000343575 ACPPP15309 386 aa14.01□□□□□ -0.17
CXCL12-201ENST00000343575 ST6GAL1P15907 406 aa14.01□□□□□ -0.17
CXCL12-201ENST00000343575 ENGP17813 658 aa14.01□□□□□ -0.17
CXCL12-201ENST00000343575 ALDH4A1P30038 563 aa14.01□□□□□ -0.17
CXCL12-201ENST00000343575 CCT8P50990 548 aa14.01□□□□□ -0.17
CXCL12-201ENST00000343575 NUBP1P53384 320 aa14.01□□□□□ -0.17
CXCL12-201ENST00000343575 OR1D5P58170 312 aa14.01□□□□□ -0.17
CXCL12-201ENST00000343575 CYP4F3Q08477 520 aa14.01□□□□□ -0.17
CXCL12-201ENST00000343575 KHDRBS2Q5VWX1 349 aaKnown RBP14.01□□□□□ -0.17
CXCL12-201ENST00000343575 GALNT18Q6P9A2 607 aa14.01□□□□□ -0.17
CXCL12-201ENST00000343575 BLOC1S3Q6QNY0 202 aa14.01□□□□□ -0.17
CXCL12-201ENST00000343575 METTL4Q8N3J2 472 aa14.01□□□□□ -0.17
CXCL12-201ENST00000343575 MFSD9Q8NBP5 474 aa14.01□□□□□ -0.17
CXCL12-201ENST00000343575 WDR48Q8TAF3 677 aa14.01□□□□□ -0.17
CXCL12-201ENST00000343575 ZUFSPQ96AP4 578 aa14.01□□□□□ -0.17
CXCL12-201ENST00000343575 METTL2AQ96IZ6 378 aaKnown RBP14.01□□□□□ -0.17
CXCL12-201ENST00000343575 TMEM74Q96NL1 305 aa14.01□□□□□ -0.17
CXCL12-201ENST00000343575 CDRT15Q96T59 188 aa14.01□□□□□ -0.17
CXCL12-201ENST00000343575 SORBS1Q9BX66 1292 aaKnown RBP14.01□□□□□ -0.17
CXCL12-201ENST00000343575 EBPLQ9BY08 206 aa14.01□□□□□ -0.17
CXCL12-201ENST00000343575 FAM60AQ9NP50 221 aa14.01□□□□□ -0.17
CXCL12-201ENST00000343575 PNPLA3Q9NST1 481 aa14.01□□□□□ -0.17
CXCL12-201ENST00000343575 ADGRE2Q9UHX3 823 aa14.01□□□□□ -0.17
CXCL12-201ENST00000343575 GMEB2Q9UKD1 530 aa14.01□□□□□ -0.17
CXCL12-201ENST00000343575 ITGB1BP2Q9UKP3 347 aa14.01□□□□□ -0.17
CXCL12-201ENST00000343575 TMED5Q9Y3A6 229 aa14.01□□□□□ -0.17
CXCL12-201ENST00000343575 PCDHGA5Q9Y5G8 931 aa14.01□□□□□ -0.17
CXCL12-201ENST00000343575 WDR87Q6ZQQ6 2873 aa14□□□□□ -0.17
CXCL12-201ENST00000343575 IGHV1OR21-1A0A087WYE8 117 aa14□□□□□ -0.17
CXCL12-201ENST00000343575 PLPP1O14494 284 aa14□□□□□ -0.17
CXCL12-201ENST00000343575 AIM2O14862 343 aa14□□□□□ -0.17
CXCL12-201ENST00000343575 YKT6O15498 198 aa14□□□□□ -0.17
CXCL12-201ENST00000343575 PCDHGA12O60330 932 aa14□□□□□ -0.17
CXCL12-201ENST00000343575 SORBS2O94875 1100 aaKnown RBP14□□□□□ -0.17
CXCL12-201ENST00000343575 FKBP9O95302 570 aa14□□□□□ -0.17
CXCL12-201ENST00000343575 BMP10O95393 424 aa14□□□□□ -0.17
CXCL12-201ENST00000343575 H6PDO95479 791 aa14□□□□□ -0.17
CXCL12-201ENST00000343575 CAPN3P20807 821 aa14□□□□□ -0.17
CXCL12-201ENST00000343575 PTX3P26022 381 aaPredicted RBP14□□□□□ -0.17
CXCL12-201ENST00000343575 AHRP35869 848 aa14□□□□□ -0.17
CXCL12-201ENST00000343575 EPHA4P54764 986 aa14□□□□□ -0.17
CXCL12-201ENST00000343575 GFERP55789 205 aa14□□□□□ -0.17
CXCL12-201ENST00000343575 STX1BP61266 288 aa14□□□□□ -0.17
CXCL12-201ENST00000343575 MRPS22P82650 360 aaKnown RBP14□□□□□ -0.17
CXCL12-201ENST00000343575 ACSM2AQ08AH3 577 aa14□□□□□ -0.17
CXCL12-201ENST00000343575 MAD2L1Q13257 205 aaPredicted RBP14□□□□□ -0.17
CXCL12-201ENST00000343575 ART3Q13508 389 aa14□□□□□ -0.17
CXCL12-201ENST00000343575 ADPRMQ3LIE5 342 aa14□□□□□ -0.17
CXCL12-201ENST00000343575 ACSM2BQ68CK6 577 aa14□□□□□ -0.17
CXCL12-201ENST00000343575 COMMD6Q7Z4G1 85 aa14□□□□□ -0.17
CXCL12-201ENST00000343575 CHERPQ8IWX8 916 aaKnown RBP14□□□□□ -0.17
CXCL12-201ENST00000343575 KRTCAP2Q8N6L1 136 aa14□□□□□ -0.17
CXCL12-201ENST00000343575 CLHC1Q8NHS4 586 aa14□□□□□ -0.17
CXCL12-201ENST00000343575 PUM2Q8TB72 1066 aaKnown RBP eCLIP14□□□□□ -0.17
CXCL12-201ENST00000343575 DUS3LQ96G46 650 aaKnown RBP14□□□□□ -0.17
CXCL12-201ENST00000343575 ZNF597Q96LX8 424 aa14□□□□□ -0.17
CXCL12-201ENST00000343575 MAP3K3Q99759 626 aa14□□□□□ -0.17
CXCL12-201ENST00000343575 DUSP23Q9BVJ7 150 aa14□□□□□ -0.17
CXCL12-201ENST00000343575 KLHL31Q9H511 634 aa14□□□□□ -0.17
CXCL12-201ENST00000343575 FAIMQ9NVQ4 179 aa14□□□□□ -0.17
CXCL12-201ENST00000343575 RHBDL2Q9NX52 303 aa14□□□□□ -0.17
CXCL12-201ENST00000343575 ZIM2Q9NZV7 527 aa14□□□□□ -0.17
CXCL12-201ENST00000343575 FAF1Q9UNN5 650 aaPredicted RBP14□□□□□ -0.17
CXCL12-201ENST00000343575 EIF3LQ9Y262 564 aaKnown RBP14□□□□□ -0.17
CXCL12-201ENST00000343575 MYRFQ9Y2G1 1151 aa14□□□□□ -0.17
CXCL12-201ENST00000343575 LOC105369274A0A096LPK9 316 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 LOC102723532A0A0G2JNH3 316 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 SH3PXD2BA1X283 911 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 DYTNA2CJ06 578 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 ASPDHA6ND91 283 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 LRIT2A6NDA9 550 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 RTCAO00442 366 aaKnown RBP13.99□□□□□ -0.17
CXCL12-201ENST00000343575 ZW10O43264 779 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 SLC22A3O75751 556 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 CER1O95813 267 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 GBAP04062 536 aa13.99□□□□□ -0.17
CXCL12-201ENST00000343575 HNRNPCP07910 306 aaKnown RBP eCLIP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms