RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 KLHL33A6NCF5 533 aa16.46■□□□□ 0.23
TRAPPC11-201ENST00000334690 GRXCR2A6NFK2 248 aa16.46■□□□□ 0.23
TRAPPC11-201ENST00000334690 CH25HO95992 272 aa16.46■□□□□ 0.23
TRAPPC11-201ENST00000334690 MYF6P23409 242 aa16.46■□□□□ 0.23
TRAPPC11-201ENST00000334690 TXNL4AP83876 142 aaKnown RBP16.46■□□□□ 0.23
TRAPPC11-201ENST00000334690 ELAVL3Q14576 367 aaKnown RBP16.46■□□□□ 0.23
TRAPPC11-201ENST00000334690 EIF4HQ15056 248 aaKnown RBP16.46■□□□□ 0.23
TRAPPC11-201ENST00000334690 SLC36A4Q6YBV0 504 aa16.46■□□□□ 0.23
TRAPPC11-201ENST00000334690 OR52E4Q8NGH9 312 aa16.46■□□□□ 0.23
TRAPPC11-201ENST00000334690 SETD7Q8WTS6 366 aaKnown RBP16.46■□□□□ 0.23
TRAPPC11-201ENST00000334690 BIRC8Q96P09 236 aa16.46■□□□□ 0.23
TRAPPC11-201ENST00000334690 PIP5K1AQ99755 562 aa16.46■□□□□ 0.23
TRAPPC11-201ENST00000334690 FAM118AQ9NWS6 357 aa16.46■□□□□ 0.23
TRAPPC11-201ENST00000334690 RBM7Q9Y580 266 aaKnown RBP16.46■□□□□ 0.23
TRAPPC11-201ENST00000334690 FKBP7Q9Y680 259 aa16.46■□□□□ 0.23
TRAPPC11-201ENST00000334690 CITO14578 2027 aa16.46■□□□□ 0.23
TRAPPC11-201ENST00000334690 BPIP17213 487 aa16.46■□□□□ 0.23
TRAPPC11-201ENST00000334690 HRH2P25021 359 aa16.46■□□□□ 0.23
TRAPPC11-201ENST00000334690 GSTM4Q03013 218 aa16.46■□□□□ 0.23
TRAPPC11-201ENST00000334690 NPRL3Q12980 569 aa16.46■□□□□ 0.23
TRAPPC11-201ENST00000334690 METTL2BQ6P1Q9 378 aaKnown RBP16.46■□□□□ 0.23
TRAPPC11-201ENST00000334690 ZNF517Q6ZMY9 492 aaPredicted RBP16.46■□□□□ 0.23
TRAPPC11-201ENST00000334690 CARM1Q86X55 608 aa16.46■□□□□ 0.23
TRAPPC11-201ENST00000334690 PRSS58Q8IYP2 241 aa16.46■□□□□ 0.23
TRAPPC11-201ENST00000334690 DMRTB1Q96MA1 342 aa16.46■□□□□ 0.23
TRAPPC11-201ENST00000334690 LYARQ9NX58 379 aaKnown RBP16.46■□□□□ 0.23
TRAPPC11-201ENST00000334690 SHMT2P34897 504 aa16.46■□□□□ 0.22
TRAPPC11-201ENST00000334690 SPINT3P49223 89 aa16.46■□□□□ 0.22
TRAPPC11-201ENST00000334690 HTR6P50406 440 aa16.46■□□□□ 0.22
TRAPPC11-201ENST00000334690 MEF2AQ02078 507 aaPredicted RBP16.46■□□□□ 0.22
TRAPPC11-201ENST00000334690 GINS1Q14691 196 aa16.46■□□□□ 0.22
TRAPPC11-201ENST00000334690 OR8J1Q8NGP2 316 aa16.46■□□□□ 0.22
TRAPPC11-201ENST00000334690 CNIH3Q8TBE1 160 aa16.46■□□□□ 0.22
TRAPPC11-201ENST00000334690 NEK7Q8TDX7 302 aa16.46■□□□□ 0.22
TRAPPC11-201ENST00000334690 POF1BQ8WVV4 589 aa16.46■□□□□ 0.22
TRAPPC11-201ENST00000334690 CSNK1G1Q9HCP0 422 aa16.46■□□□□ 0.22
TRAPPC11-201ENST00000334690 MS4A12Q9NXJ0 267 aa16.46■□□□□ 0.22
TRAPPC11-201ENST00000334690 DKK3Q9UBP4 350 aa16.46■□□□□ 0.22
TRAPPC11-201ENST00000334690 EXOSC1Q9Y3B2 195 aaKnown RBP16.46■□□□□ 0.22
TRAPPC11-201ENST00000334690 PRKAB1Q9Y478 270 aa16.46■□□□□ 0.22
TRAPPC11-201ENST00000334690 KIF13AQ9H1H9 1805 aa16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 MYADML2A6NDP7 307 aa16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 FAAHO00519 579 aa16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 SOCS2O14508 198 aa16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 TRIM3O75382 744 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 NRIP1P48552 1158 aa16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 GABARAPL2P60520 117 aa16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 RPS3AP61247 264 aaKnown RBP16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 CENPSQ8N2Z9 138 aa16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 ZNF675Q8TD23 568 aa16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 GRHL3Q8TE85 626 aa16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 DGAT2Q96PD7 388 aa16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 MCHR1Q99705 422 aa16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 RHCGQ9UBD6 479 aa16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 LIPT1Q9Y234 373 aa16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 URB1O60287 2271 aaKnown RBP16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 K7ERQ8 282 aa16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 PRODHO43272 600 aa16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 GMFGO60234 142 aa16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 RPS3P23396 243 aaKnown RBP eCLIP16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 CCKBRP32239 447 aa16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 TAS2R43P59537 309 aa16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 QSOX2Q6ZRP7 698 aa16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 ZNF367Q7RTV3 350 aa16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 PTERQ96BW5 349 aa16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 RC3H2Q9HBD1 1191 aaKnown RBP16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 EMCNQ9ULC0 261 aa16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 SPO11Q9Y5K1 396 aa16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 RHOP08100 348 aa16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 PKDCCQ504Y2 493 aa16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 ARHGAP12Q8IWW6 846 aa16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 PIGKQ92643 395 aa16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 ZNF689Q96CS4 500 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 EPYCQ99645 322 aa16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 ANKRD60Q9BZ19 345 aa16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 ALS2Q96Q42 1657 aa16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 TNFP01375 233 aa16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 IL3P08700 152 aa16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 KCNA5P22460 613 aa16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 SUOXP51687 545 aa16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 TBPL1P62380 186 aa16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 RCAN2Q14206 197 aa16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 SLC27A4Q6P1M0 643 aa16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 ZSWIM9Q86XI8 627 aa16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 FIBINQ8TAL6 211 aa16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 UTP4Q969X6 686 aaKnown RBP16.45■□□□□ 0.22
TRAPPC11-201ENST00000334690 HMGB3O15347 200 aaKnown RBP16.44■□□□□ 0.22
TRAPPC11-201ENST00000334690 ADH1BP00325 375 aa16.44■□□□□ 0.22
TRAPPC11-201ENST00000334690 MT-ND2P03891 347 aa16.44■□□□□ 0.22
TRAPPC11-201ENST00000334690 YES1P07947 543 aa16.44■□□□□ 0.22
TRAPPC11-201ENST00000334690 CD9P21926 228 aa16.44■□□□□ 0.22
TRAPPC11-201ENST00000334690 CXCR1P25024 350 aa16.44■□□□□ 0.22
TRAPPC11-201ENST00000334690 ADAM15Q13444 863 aa16.44■□□□□ 0.22
TRAPPC11-201ENST00000334690 RAB33AQ14088 237 aa16.44■□□□□ 0.22
TRAPPC11-201ENST00000334690 HSDL2Q6YN16 418 aa16.44■□□□□ 0.22
TRAPPC11-201ENST00000334690 CNTN4Q8IWV2 1026 aa16.44■□□□□ 0.22
TRAPPC11-201ENST00000334690 CBARPQ8N350 705 aaPredicted RBP16.44■□□□□ 0.22
TRAPPC11-201ENST00000334690 LGALS12Q96DT0 336 aa16.44■□□□□ 0.22
TRAPPC11-201ENST00000334690 SLC12A9Q9BXP2 914 aa16.44■□□□□ 0.22
TRAPPC11-201ENST00000334690 BHLHE41Q9C0J9 482 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms