RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 UBE3DQ7Z6J8 389 aa16.92■□□□□ 0.3
SNRPA1-201ENST00000254193 ANKRD37Q7Z713 158 aa16.92■□□□□ 0.3
SNRPA1-201ENST00000254193 TDRPQ86YL5 185 aa16.92■□□□□ 0.3
SNRPA1-201ENST00000254193 CA13Q8N1Q1 262 aa16.92■□□□□ 0.3
SNRPA1-201ENST00000254193 PLPP5Q8NEB5 264 aa16.92■□□□□ 0.3
SNRPA1-201ENST00000254193 OR52B6Q8NGF0 335 aa16.92■□□□□ 0.3
SNRPA1-201ENST00000254193 OR2W6PQ8NHA6 318 aa16.92■□□□□ 0.3
SNRPA1-201ENST00000254193 HUS1BQ8NHY5 278 aa16.92■□□□□ 0.3
SNRPA1-201ENST00000254193 AENQ8WTP8 325 aaKnown RBP16.92■□□□□ 0.3
SNRPA1-201ENST00000254193 ATP6V1E2Q96A05 226 aa16.92■□□□□ 0.3
SNRPA1-201ENST00000254193 CDK15Q96Q40 435 aa16.92■□□□□ 0.3
SNRPA1-201ENST00000254193 MS4A8Q9BY19 250 aa16.92■□□□□ 0.3
SNRPA1-201ENST00000254193 MFRPQ9BY79 579 aa16.92■□□□□ 0.3
SNRPA1-201ENST00000254193 ZBTB20Q9HC78 741 aaPredicted RBP16.92■□□□□ 0.3
SNRPA1-201ENST00000254193 PCDHGB7Q9Y5F8 929 aa16.92■□□□□ 0.3
SNRPA1-201ENST00000254193 PYCARD-AS1I3L0S3 204 aa16.91■□□□□ 0.3
SNRPA1-201ENST00000254193 PSMD12O00232 456 aaPredicted RBP16.91■□□□□ 0.3
SNRPA1-201ENST00000254193 B3GALT2O43825 422 aa16.91■□□□□ 0.3
SNRPA1-201ENST00000254193 SEC24DO94855 1032 aaPredicted RBP16.91■□□□□ 0.3
SNRPA1-201ENST00000254193 CELA2AP08217 269 aa16.91■□□□□ 0.3
SNRPA1-201ENST00000254193 CYC1P08574 325 aa16.91■□□□□ 0.3
SNRPA1-201ENST00000254193 JAK1P23458 1154 aa16.91■□□□□ 0.3
SNRPA1-201ENST00000254193 CERS1P27544 350 aa16.91■□□□□ 0.3
SNRPA1-201ENST00000254193 HPDP32754 393 aaPredicted RBP16.91■□□□□ 0.3
SNRPA1-201ENST00000254193 BTG2P78543 158 aa16.91■□□□□ 0.3
SNRPA1-201ENST00000254193 CPSF6Q16630 551 aaKnown RBP eCLIP16.91■□□□□ 0.3
SNRPA1-201ENST00000254193 WDR93Q6P2C0 686 aa16.91■□□□□ 0.3
SNRPA1-201ENST00000254193 LCA5Q86VQ0 697 aa16.91■□□□□ 0.3
SNRPA1-201ENST00000254193 KBTBD2Q8IY47 623 aa16.91■□□□□ 0.3
SNRPA1-201ENST00000254193 L3MBTL4Q8NA19 623 aa16.91■□□□□ 0.3
SNRPA1-201ENST00000254193 MTERF1Q99551 399 aaKnown RBP16.91■□□□□ 0.3
SNRPA1-201ENST00000254193 TRIM4Q9C037 500 aa16.91■□□□□ 0.3
SNRPA1-201ENST00000254193 LHPPQ9H008 270 aa16.91■□□□□ 0.3
SNRPA1-201ENST00000254193 OR51B5Q9H339 312 aa16.91■□□□□ 0.3
SNRPA1-201ENST00000254193 PPCSQ9HAB8 311 aa16.91■□□□□ 0.3
SNRPA1-201ENST00000254193 ZBTB26Q9HCK0 441 aa16.91■□□□□ 0.3
SNRPA1-201ENST00000254193 SEMA4BQ9NPR2 832 aaPredicted RBP16.91■□□□□ 0.3
SNRPA1-201ENST00000254193 PRDM7Q9NQW5 492 aa16.91■□□□□ 0.3
SNRPA1-201ENST00000254193 RIC8BQ9NVN3 520 aa16.91■□□□□ 0.3
SNRPA1-201ENST00000254193 C19orf25Q9UFG5 118 aaPredicted RBP16.91■□□□□ 0.3
SNRPA1-201ENST00000254193 A0A088AWK7 358 aa16.9■□□□□ 0.3
SNRPA1-201ENST00000254193 MAGEB17A8MXT2 336 aa16.9■□□□□ 0.3
SNRPA1-201ENST00000254193 H0YIV9 168 aa16.9■□□□□ 0.3
SNRPA1-201ENST00000254193 SAP18O00422 153 aaKnown RBP16.9■□□□□ 0.3
SNRPA1-201ENST00000254193 RTCAO00442 366 aaKnown RBP16.9■□□□□ 0.3
SNRPA1-201ENST00000254193 PPP6CO00743 305 aa16.9■□□□□ 0.3
SNRPA1-201ENST00000254193 DLX3O60479 287 aa16.9■□□□□ 0.3
SNRPA1-201ENST00000254193 PRMT3O60678 531 aa16.9■□□□□ 0.3
SNRPA1-201ENST00000254193 UGDHO60701 494 aa16.9■□□□□ 0.3
SNRPA1-201ENST00000254193 DPM1O60762 260 aa16.9■□□□□ 0.3
SNRPA1-201ENST00000254193 CLDN9O95484 217 aa16.9■□□□□ 0.3
SNRPA1-201ENST00000254193 RPS17P08708 135 aaKnown RBP16.9■□□□□ 0.3
SNRPA1-201ENST00000254193 PRR35P0CG20 571 aa16.9■□□□□ 0.3
SNRPA1-201ENST00000254193 KRT15P19012 456 aa16.9■□□□□ 0.3
SNRPA1-201ENST00000254193 TSPAN8P19075 237 aa16.9■□□□□ 0.3
SNRPA1-201ENST00000254193 TAC1P20366 129 aa16.9■□□□□ 0.3
SNRPA1-201ENST00000254193 ZNF10P21506 573 aaPredicted RBP16.9■□□□□ 0.3
SNRPA1-201ENST00000254193 SERPINB1P30740 379 aa16.9■□□□□ 0.3
SNRPA1-201ENST00000254193 CASRP41180 1078 aa16.9■□□□□ 0.3
SNRPA1-201ENST00000254193 CD97P48960 835 aa16.9■□□□□ 0.3
SNRPA1-201ENST00000254193 NEK2P51955 445 aa16.9■□□□□ 0.3
SNRPA1-201ENST00000254193 CCNG1P51959 295 aa16.9■□□□□ 0.3
SNRPA1-201ENST00000254193 MTTPP55157 894 aa16.9■□□□□ 0.3
SNRPA1-201ENST00000254193 CDH13P55290 713 aa16.9■□□□□ 0.3
SNRPA1-201ENST00000254193 TGM3Q08188 693 aa16.9■□□□□ 0.3
SNRPA1-201ENST00000254193 ZRSR2Q15696 482 aaKnown RBP16.9■□□□□ 0.3
SNRPA1-201ENST00000254193 TMEM35AQ53FP2 167 aa16.9■□□□□ 0.3
SNRPA1-201ENST00000254193 SH2D5Q6ZV89 423 aa16.9■□□□□ 0.3
SNRPA1-201ENST00000254193 CHSY3Q70JA7 882 aa16.9■□□□□ 0.3
SNRPA1-201ENST00000254193 RBMXL3Q8N7X1 1067 aaKnown RBP16.9■□□□□ 0.3
SNRPA1-201ENST00000254193 IMMP1LQ96LU5 166 aa16.9■□□□□ 0.3
SNRPA1-201ENST00000254193 PTCHD1Q96NR3 888 aa16.9■□□□□ 0.3
SNRPA1-201ENST00000254193 SERINC2Q96SA4 455 aa16.9■□□□□ 0.3
SNRPA1-201ENST00000254193 TUBB6Q9BUF5 446 aa16.9■□□□□ 0.3
SNRPA1-201ENST00000254193 PARD6BQ9BYG5 372 aa16.9■□□□□ 0.3
SNRPA1-201ENST00000254193 EPN3Q9H201 632 aa16.9■□□□□ 0.3
SNRPA1-201ENST00000254193 COPS7BQ9H9Q2 264 aaPredicted RBP16.9■□□□□ 0.3
SNRPA1-201ENST00000254193 DMRT3Q9NQL9 472 aa16.9■□□□□ 0.3
SNRPA1-201ENST00000254193 C5AR2Q9P296 337 aa16.9■□□□□ 0.3
SNRPA1-201ENST00000254193 PCDHGA11Q9Y5H2 935 aa16.9■□□□□ 0.3
SNRPA1-201ENST00000254193 MED13Q9UHV7 2174 aa16.89■□□□□ 0.3
SNRPA1-201ENST00000254193 BOD1L1Q8NFC6 3051 aa16.89■□□□□ 0.29
SNRPA1-201ENST00000254193 TLDC2A0PJX2 215 aa16.89■□□□□ 0.29
SNRPA1-201ENST00000254193 KLHL41O60662 606 aa16.89■□□□□ 0.29
SNRPA1-201ENST00000254193 SERPINA7P05543 415 aa16.89■□□□□ 0.29
SNRPA1-201ENST00000254193 GSTA1P08263 222 aa16.89■□□□□ 0.29
SNRPA1-201ENST00000254193 MAOAP21397 527 aa16.89■□□□□ 0.29
SNRPA1-201ENST00000254193 PIK3CBP42338 1070 aa16.89■□□□□ 0.29
SNRPA1-201ENST00000254193 TRAF3Q13114 568 aa16.89■□□□□ 0.29
SNRPA1-201ENST00000254193 RASA2Q15283 850 aa16.89■□□□□ 0.29
SNRPA1-201ENST00000254193 SFT2D3Q587I9 215 aa16.89■□□□□ 0.29
SNRPA1-201ENST00000254193 AGAP7PQ5VUJ5 663 aa16.89■□□□□ 0.29
SNRPA1-201ENST00000254193 KHDRBS2Q5VWX1 349 aaKnown RBP16.89■□□□□ 0.29
SNRPA1-201ENST00000254193 EMBQ6PCB8 327 aa16.89■□□□□ 0.29
SNRPA1-201ENST00000254193 ZNF793Q6ZN11 406 aa16.89■□□□□ 0.29
SNRPA1-201ENST00000254193 CNPY4Q8N129 248 aa16.89■□□□□ 0.29
SNRPA1-201ENST00000254193 BRIX1Q8TDN6 353 aaKnown RBP16.89■□□□□ 0.29
SNRPA1-201ENST00000254193 ZNF483Q8TF39 744 aaPredicted RBP16.89■□□□□ 0.29
SNRPA1-201ENST00000254193 PSMF1Q92530 271 aa16.89■□□□□ 0.29
SNRPA1-201ENST00000254193 CMTM7Q96FZ5 175 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms