RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 COLEC10Q9Y6Z7 277 aa17.41■□□□□ 0.38
SNAPC3-207ENST00000610884 PRPH2P23942 346 aa17.41■□□□□ 0.38
SNAPC3-207ENST00000610884 TIA1P31483 386 aaKnown RBP eCLIP17.41■□□□□ 0.38
SNAPC3-207ENST00000610884 SLC5A2P31639 672 aa17.41■□□□□ 0.38
SNAPC3-207ENST00000610884 ALDH9A1P49189 494 aa17.41■□□□□ 0.38
SNAPC3-207ENST00000610884 MAZP56270 477 aaKnown RBP17.41■□□□□ 0.38
SNAPC3-207ENST00000610884 RAB8AP61006 207 aa17.41■□□□□ 0.38
SNAPC3-207ENST00000610884 YPEL5P62699 121 aa17.41■□□□□ 0.38
SNAPC3-207ENST00000610884 RNF165Q6ZSG1 346 aa17.41■□□□□ 0.38
SNAPC3-207ENST00000610884 KRT78Q8N1N4 520 aa17.41■□□□□ 0.38
SNAPC3-207ENST00000610884 RNF31Q96EP0 1072 aa17.41■□□□□ 0.38
SNAPC3-207ENST00000610884 DPH2Q9BQC3 489 aaPredicted RBP17.41■□□□□ 0.38
SNAPC3-207ENST00000610884 PAIP1Q9H074 479 aaKnown RBP17.41■□□□□ 0.38
SNAPC3-207ENST00000610884 KIR3DX1Q9H7L2 352 aa17.41■□□□□ 0.38
SNAPC3-207ENST00000610884 LHX9Q9NQ69 397 aa17.41■□□□□ 0.38
SNAPC3-207ENST00000610884 GALNT8Q9NY28 637 aa17.41■□□□□ 0.38
SNAPC3-207ENST00000610884 APOBEC3BQ9UH17 382 aaKnown RBP17.41■□□□□ 0.38
SNAPC3-207ENST00000610884 PCDHB11Q9Y5F2 797 aa17.41■□□□□ 0.38
SNAPC3-207ENST00000610884 CAPNS1P04632 268 aa17.4■□□□□ 0.38
SNAPC3-207ENST00000610884 IL3P08700 152 aa17.4■□□□□ 0.38
SNAPC3-207ENST00000610884 KIR3DL1P43629 444 aa17.4■□□□□ 0.38
SNAPC3-207ENST00000610884 MRPL19P49406 292 aaKnown RBP17.4■□□□□ 0.38
SNAPC3-207ENST00000610884 HPCAP84074 193 aa17.4■□□□□ 0.38
SNAPC3-207ENST00000610884 C2orf80Q0P641 193 aa17.4■□□□□ 0.38
SNAPC3-207ENST00000610884 MTX3Q5HYI7 312 aa17.4■□□□□ 0.38
SNAPC3-207ENST00000610884 ABHD11Q8NFV4 315 aa17.4■□□□□ 0.38
SNAPC3-207ENST00000610884 PHF12Q96QT6 1004 aa17.4■□□□□ 0.38
SNAPC3-207ENST00000610884 LRRC61Q9BV99 259 aa17.4■□□□□ 0.38
SNAPC3-207ENST00000610884 MVB12BQ9H7P6 319 aa17.4■□□□□ 0.38
SNAPC3-207ENST00000610884 CPNE7Q9UBL6 633 aa17.4■□□□□ 0.38
SNAPC3-207ENST00000610884 SUCOQ9UBS9 1254 aaKnown RBP17.4■□□□□ 0.38
SNAPC3-207ENST00000610884 SNX13Q9Y5W8 968 aa17.4■□□□□ 0.38
SNAPC3-207ENST00000610884 TTC28Q96AY4 2481 aa17.4■□□□□ 0.38
SNAPC3-207ENST00000610884 METTL12A8MUP2 240 aa17.4■□□□□ 0.38
SNAPC3-207ENST00000610884 C10orf142B7Z368 130 aa17.4■□□□□ 0.38
SNAPC3-207ENST00000610884 RFXANKO14593 260 aa17.4■□□□□ 0.38
SNAPC3-207ENST00000610884 ARPC2O15144 300 aa17.4■□□□□ 0.38
SNAPC3-207ENST00000610884 PRICKLE3O43900 615 aaPredicted RBP17.4■□□□□ 0.38
SNAPC3-207ENST00000610884 ZNF217O75362 1048 aa17.4■□□□□ 0.38
SNAPC3-207ENST00000610884 MYO1DO94832 1006 aa17.4■□□□□ 0.38
SNAPC3-207ENST00000610884 VIPP01282 170 aa17.4■□□□□ 0.38
SNAPC3-207ENST00000610884 TPP2P29144 1249 aaPredicted RBP17.4■□□□□ 0.38
SNAPC3-207ENST00000610884 PPM1FP49593 454 aaPredicted RBP17.4■□□□□ 0.38
SNAPC3-207ENST00000610884 CCR5P51681 352 aa17.4■□□□□ 0.38
SNAPC3-207ENST00000610884 PCDH1Q08174 1060 aa17.4■□□□□ 0.38
SNAPC3-207ENST00000610884 MPEG1Q2M385 716 aa17.4■□□□□ 0.38
SNAPC3-207ENST00000610884 UBE3DQ7Z6J8 389 aa17.4■□□□□ 0.38
SNAPC3-207ENST00000610884 KCT2Q8NC54 265 aa17.4■□□□□ 0.38
SNAPC3-207ENST00000610884 TSPAN14Q8NG11 270 aa17.4■□□□□ 0.38
SNAPC3-207ENST00000610884 SHDQ96IW2 340 aa17.4■□□□□ 0.38
SNAPC3-207ENST00000610884 ZNF583Q96ND8 569 aa17.4■□□□□ 0.38
SNAPC3-207ENST00000610884 SEPHS2Q99611 448 aa17.4■□□□□ 0.38
SNAPC3-207ENST00000610884 ZNF717Q9BY31 904 aaPredicted RBP17.4■□□□□ 0.38
SNAPC3-207ENST00000610884 EHD1Q9H4M9 534 aa17.4■□□□□ 0.38
SNAPC3-207ENST00000610884 VPS4AQ9UN37 437 aa17.4■□□□□ 0.38
SNAPC3-207ENST00000610884 TMED5Q9Y3A6 229 aa17.4■□□□□ 0.38
SNAPC3-207ENST00000610884 NDUFS4O43181 175 aa17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 SCN2BO60939 215 aa17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 TIPRLO75663 272 aa17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 CTSBP07858 339 aa17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 HOXC4P09017 264 aaPredicted RBP17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 C7P10643 843 aa17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 LSSP48449 732 aa17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 CCNYL2Q5T2Q4 361 aa17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 SLC9B2Q86UD5 537 aa17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 TMEM132CQ8N3T6 1108 aa17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 SYNPOQ8N3V7 929 aa17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 DPP10Q8N608 796 aa17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 OR5AK3PQ8NH89 298 aa17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 C16orf78Q8WTQ4 265 aa17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 REPS1Q96D71 796 aa17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 UCKL1Q9NWZ5 548 aa17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 TRNAU1APQ9NX07 287 aaKnown RBP17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 ASIC5Q9NY37 505 aa17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 CEPT1Q9Y6K0 416 aa17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 FOXE1O00358 373 aaPredicted RBP17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 TNFRSF10CO14798 259 aa17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 HCRTR1O43613 425 aa17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 TMPRSS11DO60235 418 aa17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 DNAJB6O75190 326 aa17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 C8BP07358 591 aa17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 CDH2P19022 906 aaPredicted RBP17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 PRPS1L1P21108 318 aa17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 HRH2P25021 359 aa17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 PTPN6P29350 595 aa17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 DEFB133Q30KQ1 61 aa17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 PRPF38BQ5VTL8 546 aaKnown RBP17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 KHDRBS2Q5VWX1 349 aaKnown RBP17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 RAB42Q8N4Z0 105 aa17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 DTWD1Q8N5C7 304 aa17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 TRIML2Q8N7C3 387 aa17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 FAM86B1Q8N7N1 296 aa17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 GPBAR1Q8TDU6 330 aa17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 FIG4Q92562 907 aa17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 TEFMQ96QE5 360 aaKnown RBP17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 CIB1Q99828 191 aa17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 RPF2Q9H7B2 306 aaKnown RBP17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 WASH6PQ9NQA3 447 aa17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 STARD5Q9NSY2 213 aa17.39■□□□□ 0.37
SNAPC3-207ENST00000610884 SPATA7Q9P0W8 599 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms