RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 SCELO95171 688 aa14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 SNRPB2P08579 225 aaKnown RBP14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 ANXA4P09525 319 aaPredicted RBP14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 ANKRD34CP0C6C1 535 aa14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 SLC35G6P0C7Q6 338 aa14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 CKMT2P17540 419 aa14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 CAPN3P20807 821 aa14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 TSFMP43897 325 aaKnown RBP14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 ASMTP46597 345 aa14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 RAP1GDS1P52306 607 aa14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 POLR2JP52435 117 aaKnown RBP14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 CLNS1AP54105 237 aaKnown RBP14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 SNRPNP63162 240 aaKnown RBP14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 RGS1Q08116 209 aa14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 RCAN2Q14206 197 aa14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 PRTGQ2VWP7 1150 aa14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 OR4C11Q6IEV9 310 aa14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 ZNF793Q6ZN11 406 aa14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 PAGE2Q7Z2X7 111 aa14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 NUDT13Q86X67 352 aa14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 D2HGDHQ8N465 521 aa14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 KRTCAP2Q8N6L1 136 aa14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 KCT2Q8NC54 265 aa14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 SRFBP1Q8NEF9 429 aaKnown RBP14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 CLHC1Q8NHS4 586 aa14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 RHBDD1Q8TEB9 315 aa14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 C16orf78Q8WTQ4 265 aa14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 RERGQ96A58 199 aaPredicted RBP14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 EGLN2Q96KS0 407 aa14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 TSSK3Q96PN8 268 aa14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 TEFMQ96QE5 360 aaKnown RBP14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 RTKNQ9BST9 563 aa14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 DPY30Q9C005 99 aa14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 CLMPQ9H6B4 373 aa14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 PRM3Q9NNZ6 103 aa14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 PDE7BQ9NP56 450 aa14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 MYNNQ9NPC7 610 aa14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 TMEM9BQ9NQ34 198 aa14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 PRDM7Q9NQW5 492 aa14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 CCDC167Q9P0B6 97 aa14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 PLCL2Q9UPR0 1127 aa14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 DYTNA2CJ06 578 aa14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 ASPDHA6ND91 283 aa14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 C9JVG2 144 aa14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 NTN3O00634 580 aaPredicted RBP14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 ZSCAN9O15535 394 aaPredicted RBP14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 ERI3O43414 337 aaKnown RBP14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 TMPRSS11DO60235 418 aa14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 SRPX2O60687 465 aaPredicted RBP14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 CBFA2T3O75081 653 aa14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 CPNE6O95741 557 aa14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 LMNAP02545 664 aaKnown RBP14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 KLK1P06870 262 aa14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 GP1BAP07359 652 aa14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 ATP5A1P25705 553 aaKnown RBP14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 MLLT3P42568 568 aaPredicted RBP14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 CPA2P48052 419 aa14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 PPM1FP49593 454 aaPredicted RBP14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 VSX2P58304 361 aaPredicted RBP14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 TRA2BP62995 288 aaKnown RBP14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 ZNF763Q0D2J5 394 aa14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 HKDC1Q2TB90 917 aa14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 DEFB110Q30KQ9 67 aa14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 MRM1Q6IN84 353 aaKnown RBP14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 FAM71E1Q6IPT2 247 aa14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 TMEM214Q6NUQ4 689 aaKnown RBP14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 ASRGL1Q7L266 308 aa14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 DGLUCYQ7Z3D6 616 aa14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 ARHGAP22Q7Z5H3 698 aa14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 ZNF655Q8N720 491 aaPredicted RBP14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 CSNK1A1LQ8N752 337 aa14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 AMER3Q8N944 861 aa14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 OR4D9Q8NGE8 314 aa14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 FBXO27Q8NI29 283 aa14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 UTP15Q8TED0 518 aaKnown RBP14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 NUDT8Q8WV74 236 aa14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 TESCQ96BS2 214 aa14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 KCNC2Q96PR1 638 aa14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 C17orf62Q9BQA9 187 aa14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 ZNF768Q9H5H4 540 aaKnown RBP14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 FAM86C1Q9NVL1 165 aa14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 KLHL3Q9UH77 587 aa14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 ATXN7L1Q9ULK2 861 aaPredicted RBP14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 EXO1Q9UQ84 846 aaKnown RBP14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 WBP11Q9Y2W2 641 aaKnown RBP14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 CNOT1A5YKK6 2376 aaKnown RBP14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 KNTC1P50748 2209 aa14.02□□□□□ -0.17
SHKBP1-211ENST00000595945 GNG14A0A1W2PPG7 69 aa14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 URADA6NGE7 173 aa14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 BBIP1A8MTZ0 92 aa14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 H3BMH7 237 aa14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 NR5A2O00482 541 aa14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 TXNDC9O14530 226 aa14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 RASSF9O75901 435 aa14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 GBAP04062 536 aa14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 CTSBP07858 339 aa14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 MSL3P1P0C860 447 aa14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 ZNF888P0CJ79 500 aaPredicted RBP14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 NELFEP18615 380 aaKnown RBP14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 PRPS1L1P21108 318 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms