RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 MLLT1Q03111 559 aaPredicted RBP17.34■□□□□ 0.37
SMPD3-211ENST00000568373 TMEM179BQ7Z7N9 219 aa17.34■□□□□ 0.37
SMPD3-211ENST00000568373 NAGSQ8N159 534 aa17.34■□□□□ 0.37
SMPD3-211ENST00000568373 PJA1Q8NG27 643 aa17.34■□□□□ 0.37
SMPD3-211ENST00000568373 TBC1D20Q96BZ9 403 aa17.34■□□□□ 0.37
SMPD3-211ENST00000568373 DGCR14Q96DF8 476 aaKnown RBP17.34■□□□□ 0.37
SMPD3-211ENST00000568373 SCARF2Q96GP6 870 aaPredicted RBP17.34■□□□□ 0.37
SMPD3-211ENST00000568373 F2RL3Q96RI0 385 aa17.34■□□□□ 0.37
SMPD3-211ENST00000568373 SLC35A5Q9BS91 424 aa17.34■□□□□ 0.37
SMPD3-211ENST00000568373 RAB11FIP5Q9BXF6 653 aa17.34■□□□□ 0.37
SMPD3-211ENST00000568373 MIEF1Q9NQG6 463 aa17.34■□□□□ 0.37
SMPD3-211ENST00000568373 FAF1Q9UNN5 650 aaPredicted RBP17.34■□□□□ 0.37
SMPD3-211ENST00000568373 KIF1CO43896 1103 aaKnown RBP17.33■□□□□ 0.37
SMPD3-211ENST00000568373 PKLRP30613 574 aa17.33■□□□□ 0.37
SMPD3-211ENST00000568373 PCGF2P35227 344 aa17.33■□□□□ 0.37
SMPD3-211ENST00000568373 PEX19P40855 299 aa17.33■□□□□ 0.37
SMPD3-211ENST00000568373 PRDX1Q06830 199 aaKnown RBP17.33■□□□□ 0.37
SMPD3-211ENST00000568373 EPS8Q12929 822 aa17.33■□□□□ 0.37
SMPD3-211ENST00000568373 PPP1R8Q12972 351 aaKnown RBP17.33■□□□□ 0.37
SMPD3-211ENST00000568373 BIRC2Q13490 618 aa17.33■□□□□ 0.37
SMPD3-211ENST00000568373 KRT33BQ14525 404 aa17.33■□□□□ 0.37
SMPD3-211ENST00000568373 PRSS53Q2L4Q9 553 aa17.33■□□□□ 0.37
SMPD3-211ENST00000568373 UAP1L1Q3KQV9 507 aa17.33■□□□□ 0.37
SMPD3-211ENST00000568373 ZNF852Q6ZMS4 543 aa17.33■□□□□ 0.37
SMPD3-211ENST00000568373 RBM44Q6ZP01 1051 aaKnown RBP17.33■□□□□ 0.37
SMPD3-211ENST00000568373 PAGE2Q7Z2X7 111 aa17.33■□□□□ 0.37
SMPD3-211ENST00000568373 HIPK1Q86Z02 1210 aa17.33■□□□□ 0.37
SMPD3-211ENST00000568373 C11orf65Q8NCR3 313 aa17.33■□□□□ 0.37
SMPD3-211ENST00000568373 OR2L8Q8NGY9 312 aa17.33■□□□□ 0.37
SMPD3-211ENST00000568373 ASB12Q8WXK4 309 aa17.33■□□□□ 0.37
SMPD3-211ENST00000568373 MAL2Q969L2 176 aa17.33■□□□□ 0.37
SMPD3-211ENST00000568373 NECTIN4Q96NY8 510 aa17.33■□□□□ 0.37
SMPD3-211ENST00000568373 TOR3AQ9H497 397 aa17.33■□□□□ 0.37
SMPD3-211ENST00000568373 XKR8Q9H6D3 395 aa17.33■□□□□ 0.37
SMPD3-211ENST00000568373 FGF22Q9HCT0 170 aa17.33■□□□□ 0.37
SMPD3-211ENST00000568373 GPATCH2Q9NW75 528 aa17.33■□□□□ 0.37
SMPD3-211ENST00000568373 COLQQ9Y215 455 aaPredicted RBP17.33■□□□□ 0.37
SMPD3-211ENST00000568373 AP1M2Q9Y6Q5 423 aa17.33■□□□□ 0.37
SMPD3-211ENST00000568373 PIAS3Q9Y6X2 628 aa17.33■□□□□ 0.37
SMPD3-211ENST00000568373 OR52A4PA6NMU1 304 aa17.33■□□□□ 0.36
SMPD3-211ENST00000568373 PDZK1P1A8MUH7 402 aa17.33■□□□□ 0.36
SMPD3-211ENST00000568373 DRD1P21728 446 aa17.33■□□□□ 0.36
SMPD3-211ENST00000568373 BSGP35613 385 aa17.33■□□□□ 0.36
SMPD3-211ENST00000568373 MAPK12P53778 367 aa17.33■□□□□ 0.36
SMPD3-211ENST00000568373 CDH15P55291 814 aa17.33■□□□□ 0.36
SMPD3-211ENST00000568373 CSNK1G2P78368 415 aa17.33■□□□□ 0.36
SMPD3-211ENST00000568373 TEAD4Q15561 434 aa17.33■□□□□ 0.36
SMPD3-211ENST00000568373 ANGPTL8Q6UXH0 198 aa17.33■□□□□ 0.36
SMPD3-211ENST00000568373 USP30Q70CQ3 517 aa17.33■□□□□ 0.36
SMPD3-211ENST00000568373 VTCN1Q7Z7D3 282 aa17.33■□□□□ 0.36
SMPD3-211ENST00000568373 FAM124AQ86V42 546 aa17.33■□□□□ 0.36
SMPD3-211ENST00000568373 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.33■□□□□ 0.36
SMPD3-211ENST00000568373 MMP21Q8N119 569 aa17.33■□□□□ 0.36
SMPD3-211ENST00000568373 SMRP1Q8NCR6 262 aa17.33■□□□□ 0.36
SMPD3-211ENST00000568373 OR2A1Q8NGT9 310 aa17.33■□□□□ 0.36
SMPD3-211ENST00000568373 HSH2DQ96JZ2 352 aa17.33■□□□□ 0.36
SMPD3-211ENST00000568373 SLC6A16Q9GZN6 736 aa17.33■□□□□ 0.36
SMPD3-211ENST00000568373 RBM38Q9H0Z9 239 aaKnown RBP17.33■□□□□ 0.36
SMPD3-211ENST00000568373 MVB12BQ9H7P6 319 aa17.33■□□□□ 0.36
SMPD3-211ENST00000568373 TUBA8Q9NY65 449 aaPredicted RBP17.33■□□□□ 0.36
SMPD3-211ENST00000568373 TAS2R9Q9NYW1 312 aa17.33■□□□□ 0.36
SMPD3-211ENST00000568373 TAAR2Q9P1P5 351 aa17.33■□□□□ 0.36
SMPD3-211ENST00000568373 RAPGEFL1Q9UHV5 662 aa17.33■□□□□ 0.36
SMPD3-211ENST00000568373 ABCG2Q9UNQ0 655 aa17.33■□□□□ 0.36
SMPD3-211ENST00000568373 NCKAP1Q9Y2A7 1128 aa17.33■□□□□ 0.36
SMPD3-211ENST00000568373 WBP11Q9Y2W2 641 aaKnown RBP17.33■□□□□ 0.36
SMPD3-211ENST00000568373 U3KQV3 271 aa17.33■□□□□ 0.36
SMPD3-211ENST00000568373 COL4A2P08572 1712 aa17.32■□□□□ 0.36
SMPD3-211ENST00000568373 IGKV1-8A0A0C4DH67 115 aa17.32■□□□□ 0.36
SMPD3-211ENST00000568373 A0A1W2PRB8 838 aa17.32■□□□□ 0.36
SMPD3-211ENST00000568373 RTCAO00442 366 aaKnown RBP17.32■□□□□ 0.36
SMPD3-211ENST00000568373 CAPN5O15484 640 aaPredicted RBP17.32■□□□□ 0.36
SMPD3-211ENST00000568373 OR1F1O43749 312 aa17.32■□□□□ 0.36
SMPD3-211ENST00000568373 NOBOXO60393 691 aa17.32■□□□□ 0.36
SMPD3-211ENST00000568373 FABP3P05413 133 aa17.32■□□□□ 0.36
SMPD3-211ENST00000568373 GSTT1P30711 240 aa17.32■□□□□ 0.36
SMPD3-211ENST00000568373 CRATP43155 626 aa17.32■□□□□ 0.36
SMPD3-211ENST00000568373 GRSF1Q12849 480 aaKnown RBP eCLIP17.32■□□□□ 0.36
SMPD3-211ENST00000568373 COX20Q5RI15 118 aa17.32■□□□□ 0.36
SMPD3-211ENST00000568373 OR2T5Q6IEZ7 315 aa17.32■□□□□ 0.36
SMPD3-211ENST00000568373 SHQ1Q6PI26 577 aaKnown RBP17.32■□□□□ 0.36
SMPD3-211ENST00000568373 ADGRF3Q8IZF5 1079 aa17.32■□□□□ 0.36
SMPD3-211ENST00000568373 OR52N2Q8NGI0 321 aa17.32■□□□□ 0.36
SMPD3-211ENST00000568373 OR52E1Q8NGJ3 308 aa17.32■□□□□ 0.36
SMPD3-211ENST00000568373 OR2T29Q8NH02 315 aa17.32■□□□□ 0.36
SMPD3-211ENST00000568373 NCSTNQ92542 709 aa17.32■□□□□ 0.36
SMPD3-211ENST00000568373 MUS81Q96NY9 551 aa17.32■□□□□ 0.36
SMPD3-211ENST00000568373 ASPSCR1Q9BZE9 553 aa17.32■□□□□ 0.36
SMPD3-211ENST00000568373 TM9SF3Q9HD45 589 aa17.32■□□□□ 0.36
SMPD3-211ENST00000568373 PRDM8Q9NQV8 689 aa17.32■□□□□ 0.36
SMPD3-211ENST00000568373 VNN3Q9NY84 501 aa17.32■□□□□ 0.36
SMPD3-211ENST00000568373 IFT80Q9P2H3 777 aaPredicted RBP17.32■□□□□ 0.36
SMPD3-211ENST00000568373 A0A087WXM4 84 aa17.32■□□□□ 0.36
SMPD3-211ENST00000568373 POM121BA6NF01 834 aa17.32■□□□□ 0.36
SMPD3-211ENST00000568373 TRIM64CA6NLI5 447 aa17.32■□□□□ 0.36
SMPD3-211ENST00000568373 TNFRSF21O75509 655 aa17.32■□□□□ 0.36
SMPD3-211ENST00000568373 BMP10O95393 424 aa17.32■□□□□ 0.36
SMPD3-211ENST00000568373 FESP07332 822 aa17.32■□□□□ 0.36
SMPD3-211ENST00000568373 DDCP20711 480 aa17.32■□□□□ 0.36
SMPD3-211ENST00000568373 ALDH3B2P48448 385 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms