RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 CTAGE8P0CG41 777 aa15.76■□□□□ 0.11
USB1-211ENST00000565662 CNTFP26441 200 aa15.76■□□□□ 0.11
USB1-211ENST00000565662 SERPINB8P50452 374 aa15.76■□□□□ 0.11
USB1-211ENST00000565662 PHEXP78562 749 aa15.76■□□□□ 0.11
USB1-211ENST00000565662 RHAGQ02094 409 aa15.76■□□□□ 0.11
USB1-211ENST00000565662 PCDH1Q08174 1060 aa15.76■□□□□ 0.11
USB1-211ENST00000565662 H3F3CQ6NXT2 135 aa15.76■□□□□ 0.11
USB1-211ENST00000565662 PAPD4Q6PIY7 484 aaKnown RBP15.76■□□□□ 0.11
USB1-211ENST00000565662 ZDHHC24Q6UX98 284 aa15.76■□□□□ 0.11
USB1-211ENST00000565662 CTAGE6Q86UF2 777 aa15.76■□□□□ 0.11
USB1-211ENST00000565662 CTAGE4Q8IX94 777 aa15.76■□□□□ 0.11
USB1-211ENST00000565662 MMGT1Q8N4V1 131 aa15.76■□□□□ 0.11
USB1-211ENST00000565662 CISD2Q8N5K1 135 aaKnown RBP15.76■□□□□ 0.11
USB1-211ENST00000565662 ANKRD53Q8N9V6 530 aa15.76■□□□□ 0.11
USB1-211ENST00000565662 OR2L5Q8NG80 312 aa15.76■□□□□ 0.11
USB1-211ENST00000565662 FAR1Q8WVX9 515 aa15.76■□□□□ 0.11
USB1-211ENST00000565662 PSMF1Q92530 271 aa15.76■□□□□ 0.11
USB1-211ENST00000565662 FMO2Q99518 471 aa15.76■□□□□ 0.11
USB1-211ENST00000565662 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.76■□□□□ 0.11
USB1-211ENST00000565662 CAB39LQ9H9S4 337 aa15.76■□□□□ 0.11
USB1-211ENST00000565662 LANCL2Q9NS86 450 aa15.76■□□□□ 0.11
USB1-211ENST00000565662 LUZP4Q9P127 313 aa15.76■□□□□ 0.11
USB1-211ENST00000565662 PTBP2Q9UKA9 531 aaKnown RBP15.76■□□□□ 0.11
USB1-211ENST00000565662 SCN2AQ99250 2005 aa15.76■□□□□ 0.11
USB1-211ENST00000565662 PTPN13Q12923 2485 aa15.75■□□□□ 0.11
USB1-211ENST00000565662 NCF1BA6NI72 391 aaPredicted RBP15.75■□□□□ 0.11
USB1-211ENST00000565662 NCF1CA8MVU1 366 aaPredicted RBP15.75■□□□□ 0.11
USB1-211ENST00000565662 FFAR3O14843 346 aa15.75■□□□□ 0.11
USB1-211ENST00000565662 GPR42O15529 346 aa15.75■□□□□ 0.11
USB1-211ENST00000565662 CHST10O43529 356 aa15.75■□□□□ 0.11
USB1-211ENST00000565662 B3GALT2O43825 422 aa15.75■□□□□ 0.11
USB1-211ENST00000565662 SEC24DO94855 1032 aaPredicted RBP15.75■□□□□ 0.11
USB1-211ENST00000565662 C1QAP02745 245 aa15.75■□□□□ 0.11
USB1-211ENST00000565662 SLC35E2BP0CK96 405 aa15.75■□□□□ 0.11
USB1-211ENST00000565662 SMIM10L1P0DMW3 83 aa15.75■□□□□ 0.11
USB1-211ENST00000565662 GP1BBP13224 206 aa15.75■□□□□ 0.11
USB1-211ENST00000565662 NCF1P14598 390 aaPredicted RBP15.75■□□□□ 0.11
USB1-211ENST00000565662 TFEBP19484 476 aa15.75■□□□□ 0.11
USB1-211ENST00000565662 CASP2P42575 452 aa15.75■□□□□ 0.11
USB1-211ENST00000565662 KCNC1P48547 511 aa15.75■□□□□ 0.11
USB1-211ENST00000565662 SERPINB9P50453 376 aa15.75■□□□□ 0.11
USB1-211ENST00000565662 ARFIP1P53367 373 aa15.75■□□□□ 0.11
USB1-211ENST00000565662 HSD17B7P56937 341 aa15.75■□□□□ 0.11
USB1-211ENST00000565662 OR4D2P58180 307 aa15.75■□□□□ 0.11
USB1-211ENST00000565662 IRF8Q02556 426 aa15.75■□□□□ 0.11
USB1-211ENST00000565662 GUCY2DQ02846 1103 aa15.75■□□□□ 0.11
USB1-211ENST00000565662 ZNF33BQ06732 778 aa15.75■□□□□ 0.11
USB1-211ENST00000565662 E2F2Q14209 437 aa15.75■□□□□ 0.11
USB1-211ENST00000565662 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.75■□□□□ 0.11
USB1-211ENST00000565662 ADPRMQ3LIE5 342 aa15.75■□□□□ 0.11
USB1-211ENST00000565662 TMEM35AQ53FP2 167 aa15.75■□□□□ 0.11
USB1-211ENST00000565662 SFT2D3Q587I9 215 aa15.75■□□□□ 0.11
USB1-211ENST00000565662 XKR6Q5GH73 641 aa15.75■□□□□ 0.11
USB1-211ENST00000565662 C10orf62Q5T681 223 aaPredicted RBP15.75■□□□□ 0.11
USB1-211ENST00000565662 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.75■□□□□ 0.11
USB1-211ENST00000565662 SIRT6Q8N6T7 355 aa15.75■□□□□ 0.11
USB1-211ENST00000565662 SNX31Q8N9S9 440 aa15.75■□□□□ 0.11
USB1-211ENST00000565662 FAM98AQ8NCA5 519 aaKnown RBP15.75■□□□□ 0.11
USB1-211ENST00000565662 CREB3L4Q8TEY5 395 aa15.75■□□□□ 0.11
USB1-211ENST00000565662 REPS1Q96D71 796 aa15.75■□□□□ 0.11
USB1-211ENST00000565662 SMIM10Q96HG1 83 aa15.75■□□□□ 0.11
USB1-211ENST00000565662 KCNC2Q96PR1 638 aa15.75■□□□□ 0.11
USB1-211ENST00000565662 FUT8Q9BYC5 575 aa15.75■□□□□ 0.11
USB1-211ENST00000565662 CD244Q9BZW8 370 aa15.75■□□□□ 0.11
USB1-211ENST00000565662 REXO4Q9GZR2 422 aaKnown RBP15.75■□□□□ 0.11
USB1-211ENST00000565662 RHBGQ9H310 441 aa15.75■□□□□ 0.11
USB1-211ENST00000565662 ACSS3Q9H6R3 686 aa15.75■□□□□ 0.11
USB1-211ENST00000565662 KCNK13Q9HB14 408 aa15.75■□□□□ 0.11
USB1-211ENST00000565662 ZBTB20Q9HC78 741 aaPredicted RBP15.75■□□□□ 0.11
USB1-211ENST00000565662 OLAHQ9NV23 265 aa15.75■□□□□ 0.11
USB1-211ENST00000565662 OPTCQ9UBM4 332 aa15.75■□□□□ 0.11
USB1-211ENST00000565662 IKZF3Q9UKT9 509 aa15.75■□□□□ 0.11
USB1-211ENST00000565662 TNPO3Q9Y5L0 923 aaKnown RBP15.75■□□□□ 0.11
USB1-211ENST00000565662 LRRK2Q5S007 2527 aa15.75■□□□□ 0.11
USB1-211ENST00000565662 CNTRLQ7Z7A1 2325 aa15.74■□□□□ 0.11
USB1-211ENST00000565662 SCN3AQ9NY46 2000 aa15.74■□□□□ 0.11
USB1-211ENST00000565662 K7EPI3 171 aa15.74■□□□□ 0.11
USB1-211ENST00000565662 UGDHO60701 494 aa15.74■□□□□ 0.11
USB1-211ENST00000565662 CBX6O95503 412 aa15.74■□□□□ 0.11
USB1-211ENST00000565662 STATHP02808 62 aa15.74■□□□□ 0.11
USB1-211ENST00000565662 INHBAP08476 426 aa15.74■□□□□ 0.11
USB1-211ENST00000565662 ITGAMP11215 1152 aa15.74■□□□□ 0.11
USB1-211ENST00000565662 MRPS25P82663 173 aaKnown RBP15.74■□□□□ 0.11
USB1-211ENST00000565662 BIKQ13323 160 aa15.74■□□□□ 0.11
USB1-211ENST00000565662 EFTUD2Q15029 972 aaKnown RBP eCLIP15.74■□□□□ 0.11
USB1-211ENST00000565662 ACAP2Q15057 778 aa15.74■□□□□ 0.11
USB1-211ENST00000565662 NR6A1Q15406 480 aa15.74■□□□□ 0.11
USB1-211ENST00000565662 TOR1AIP1Q5JTV8 583 aa15.74■□□□□ 0.11
USB1-211ENST00000565662 ZNF595Q8IYB9 648 aa15.74■□□□□ 0.11
USB1-211ENST00000565662 CEP112Q8N8E3 955 aa15.74■□□□□ 0.11
USB1-211ENST00000565662 TMEM178AQ8NBL3 297 aa15.74■□□□□ 0.11
USB1-211ENST00000565662 OR1N1Q8NGS0 311 aa15.74■□□□□ 0.11
USB1-211ENST00000565662 KIF18AQ8NI77 898 aa15.74■□□□□ 0.11
USB1-211ENST00000565662 CCT6BQ92526 530 aa15.74■□□□□ 0.11
USB1-211ENST00000565662 C5orf34Q96MH7 638 aa15.74■□□□□ 0.11
USB1-211ENST00000565662 PTCHD1Q96NR3 888 aa15.74■□□□□ 0.11
USB1-211ENST00000565662 SERINC2Q96SA4 455 aa15.74■□□□□ 0.11
USB1-211ENST00000565662 MACROD1Q9BQ69 325 aa15.74■□□□□ 0.11
USB1-211ENST00000565662 TMEM79Q9BSE2 394 aa15.74■□□□□ 0.11
USB1-211ENST00000565662 ZDHHC18Q9NUE0 388 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms