RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 SSR2P43308 183 aa13.16□□□□□ -0.3
TPM1-215ENST00000558868 MRPS22P82650 360 aaKnown RBP13.16□□□□□ -0.3
TPM1-215ENST00000558868 PLIN5Q00G26 463 aa13.16□□□□□ -0.3
TPM1-215ENST00000558868 RHDQ02161 417 aa13.16□□□□□ -0.3
TPM1-215ENST00000558868 RGS1Q08116 209 aa13.16□□□□□ -0.3
TPM1-215ENST00000558868 BIRC2Q13490 618 aa13.16□□□□□ -0.3
TPM1-215ENST00000558868 SIM2Q14190 667 aaPredicted RBP13.16□□□□□ -0.3
TPM1-215ENST00000558868 ADPRMQ3LIE5 342 aa13.16□□□□□ -0.3
TPM1-215ENST00000558868 OR4C11Q6IEV9 310 aa13.16□□□□□ -0.3
TPM1-215ENST00000558868 LCN8Q6JVE9 175 aa13.16□□□□□ -0.3
TPM1-215ENST00000558868 SPESP1Q6UW49 350 aa13.16□□□□□ -0.3
TPM1-215ENST00000558868 TMEFF1Q8IYR6 380 aa13.16□□□□□ -0.3
TPM1-215ENST00000558868 OR10G6Q8NH81 332 aa13.16□□□□□ -0.3
TPM1-215ENST00000558868 C1orf216Q8TAB5 229 aa13.16□□□□□ -0.3
TPM1-215ENST00000558868 PATE1Q8WXA2 126 aa13.16□□□□□ -0.3
TPM1-215ENST00000558868 ZNF764Q96H86 408 aaPredicted RBP13.16□□□□□ -0.3
TPM1-215ENST00000558868 KCNC2Q96PR1 638 aa13.16□□□□□ -0.3
TPM1-215ENST00000558868 TBCDQ9BTW9 1192 aa13.16□□□□□ -0.3
TPM1-215ENST00000558868 ROGDIQ9GZN7 287 aa13.16□□□□□ -0.3
TPM1-215ENST00000558868 DDX31Q9H8H2 851 aaKnown RBP13.16□□□□□ -0.3
TPM1-215ENST00000558868 MIEF1Q9NQG6 463 aa13.16□□□□□ -0.3
TPM1-215ENST00000558868 HRASLS2Q9NWW9 162 aa13.16□□□□□ -0.3
TPM1-215ENST00000558868 VAPAQ9P0L0 249 aa13.16□□□□□ -0.3
TPM1-215ENST00000558868 CORO2BQ9UQ03 480 aa13.16□□□□□ -0.3
TPM1-215ENST00000558868 PCDHB14Q9Y5E9 798 aa13.16□□□□□ -0.3
TPM1-215ENST00000558868 SLCO1B1Q9Y6L6 691 aa13.16□□□□□ -0.3
TPM1-215ENST00000558868 SPTBN4Q9H254 2564 aa13.15□□□□□ -0.3
TPM1-215ENST00000558868 A0A0J9YY10 115 aa13.15□□□□□ -0.3
TPM1-215ENST00000558868 OR2A25A4D2G3 310 aa13.15□□□□□ -0.3
TPM1-215ENST00000558868 URADA6NGE7 173 aa13.15□□□□□ -0.3
TPM1-215ENST00000558868 LMO7DNF2Z398 122 aa13.15□□□□□ -0.3
TPM1-215ENST00000558868 GSTA4O15217 222 aa13.15□□□□□ -0.3
TPM1-215ENST00000558868 AQP9O43315 295 aa13.15□□□□□ -0.3
TPM1-215ENST00000558868 EPN2O95208 641 aa13.15□□□□□ -0.3
TPM1-215ENST00000558868 TBX6O95947 436 aaPredicted RBP13.15□□□□□ -0.3
TPM1-215ENST00000558868 IL3P08700 152 aa13.15□□□□□ -0.3
TPM1-215ENST00000558868 PIM1P11309 404 aaPredicted RBP13.15□□□□□ -0.3
TPM1-215ENST00000558868 DRD2P14416 443 aa13.15□□□□□ -0.3
TPM1-215ENST00000558868 GNSP15586 552 aa13.15□□□□□ -0.3
TPM1-215ENST00000558868 FASLGP48023 281 aa13.15□□□□□ -0.3
TPM1-215ENST00000558868 PTDSS1P48651 473 aaKnown RBP13.15□□□□□ -0.3
TPM1-215ENST00000558868 WNT3P56703 355 aa13.15□□□□□ -0.3
TPM1-215ENST00000558868 SESN3P58005 492 aa13.15□□□□□ -0.3
TPM1-215ENST00000558868 MTPNP58546 118 aa13.15□□□□□ -0.3
TPM1-215ENST00000558868 KLC1Q07866 573 aa13.15□□□□□ -0.3
TPM1-215ENST00000558868 FXNQ16595 210 aa13.15□□□□□ -0.3
TPM1-215ENST00000558868 MTX3Q5HYI7 312 aa13.15□□□□□ -0.3
TPM1-215ENST00000558868 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.15□□□□□ -0.3
TPM1-215ENST00000558868 CWF19L1Q69YN2 538 aaKnown RBP13.15□□□□□ -0.3
TPM1-215ENST00000558868 TRIM40Q6P9F5 258 aa13.15□□□□□ -0.3
TPM1-215ENST00000558868 FIGLAQ6QHK4 219 aa13.15□□□□□ -0.3
TPM1-215ENST00000558868 LRRC74BQ6ZQY2 392 aa13.15□□□□□ -0.3
TPM1-215ENST00000558868 ASPGQ86U10 573 aa13.15□□□□□ -0.3
TPM1-215ENST00000558868 IFNEQ86WN2 208 aa13.15□□□□□ -0.3
TPM1-215ENST00000558868 TMEM126BQ8IUX1 230 aa13.15□□□□□ -0.3
TPM1-215ENST00000558868 PLD3Q8IV08 490 aa13.15□□□□□ -0.3
TPM1-215ENST00000558868 OR2L5Q8NG80 312 aa13.15□□□□□ -0.3
TPM1-215ENST00000558868 FLVCR1-AS1Q8TAF5 88 aa13.15□□□□□ -0.3
TPM1-215ENST00000558868 NT5CQ8TCD5 201 aa13.15□□□□□ -0.3
TPM1-215ENST00000558868 CPPED1Q9BRF8 314 aaPredicted RBP13.15□□□□□ -0.3
TPM1-215ENST00000558868 INPP5KQ9BT40 448 aa13.15□□□□□ -0.3
TPM1-215ENST00000558868 FAIM2Q9BWQ8 316 aa13.15□□□□□ -0.3
TPM1-215ENST00000558868 ERVMER34-1Q9H9K5 563 aa13.15□□□□□ -0.3
TPM1-215ENST00000558868 PRMT8Q9NR22 394 aaPredicted RBP13.15□□□□□ -0.3
TPM1-215ENST00000558868 SLC25A37Q9NYZ2 338 aa13.15□□□□□ -0.3
TPM1-215ENST00000558868 VPS4AQ9UN37 437 aa13.15□□□□□ -0.3
TPM1-215ENST00000558868 OR5K3A6NET4 321 aa13.14□□□□□ -0.31
TPM1-215ENST00000558868 LILRA5A6NI73 299 aa13.14□□□□□ -0.31
TPM1-215ENST00000558868 FAM220BPB1ANY3 271 aa13.14□□□□□ -0.31
TPM1-215ENST00000558868 ARPC2O15144 300 aa13.14□□□□□ -0.31
TPM1-215ENST00000558868 YY2O15391 372 aa13.14□□□□□ -0.31
TPM1-215ENST00000558868 LAMTOR5O43504 91 aa13.14□□□□□ -0.31
TPM1-215ENST00000558868 SCN2BO60939 215 aa13.14□□□□□ -0.31
TPM1-215ENST00000558868 CPSF4O95639 269 aaKnown RBP13.14□□□□□ -0.31
TPM1-215ENST00000558868 GBAP04062 536 aa13.14□□□□□ -0.31
TPM1-215ENST00000558868 GPIP06744 558 aa13.14□□□□□ -0.31
TPM1-215ENST00000558868 SLC35G6P0C7Q6 338 aa13.14□□□□□ -0.31
TPM1-215ENST00000558868 UMPSP11172 480 aa13.14□□□□□ -0.31
TPM1-215ENST00000558868 HOXB9P17482 250 aaPredicted RBP13.14□□□□□ -0.31
TPM1-215ENST00000558868 DDCP20711 480 aa13.14□□□□□ -0.31
TPM1-215ENST00000558868 SLC7A1P30825 629 aa13.14□□□□□ -0.31
TPM1-215ENST00000558868 ERFP50548 548 aa13.14□□□□□ -0.31
TPM1-215ENST00000558868 ATXN3P54252 364 aaPredicted RBP13.14□□□□□ -0.31
TPM1-215ENST00000558868 ABHD18Q0P651 414 aa13.14□□□□□ -0.31
TPM1-215ENST00000558868 SLC9A5Q14940 896 aa13.14□□□□□ -0.31
TPM1-215ENST00000558868 TOR1AIP1Q5JTV8 583 aa13.14□□□□□ -0.31
TPM1-215ENST00000558868 LYSMD4Q5XG99 296 aa13.14□□□□□ -0.31
TPM1-215ENST00000558868 DNAJC14Q6Y2X3 702 aaPredicted RBP13.14□□□□□ -0.31
TPM1-215ENST00000558868 ZNF621Q6ZSS3 439 aa13.14□□□□□ -0.31
TPM1-215ENST00000558868 ANKRD46Q86W74 232 aa13.14□□□□□ -0.31
TPM1-215ENST00000558868 FAM20CQ8IXL6 584 aa13.14□□□□□ -0.31
TPM1-215ENST00000558868 MSRB3Q8IXL7 192 aa13.14□□□□□ -0.31
TPM1-215ENST00000558868 ZNF655Q8N720 491 aaPredicted RBP13.14□□□□□ -0.31
TPM1-215ENST00000558868 TRIML2Q8N7C3 387 aa13.14□□□□□ -0.31
TPM1-215ENST00000558868 CAMKVQ8NCB2 501 aa13.14□□□□□ -0.31
TPM1-215ENST00000558868 ZNF548Q8NEK5 533 aaPredicted RBP13.14□□□□□ -0.31
TPM1-215ENST00000558868 OR2T12Q8NG77 320 aa13.14□□□□□ -0.31
TPM1-215ENST00000558868 GOT1L1Q8NHS2 421 aaPredicted RBP13.14□□□□□ -0.31
TPM1-215ENST00000558868 EDAQ92838 391 aa13.14□□□□□ -0.31
TPM1-215ENST00000558868 TM4SF18Q96CE8 201 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms