RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 NPIPA5E9PKD4 350 aa16.7■□□□□ 0.26
PTPN21-208ENST00000556564 PIK3CBP42338 1070 aa16.7■□□□□ 0.26
PTPN21-208ENST00000556564 ABRAXAS2Q15018 415 aa16.7■□□□□ 0.26
PTPN21-208ENST00000556564 MAPK14Q16539 360 aa16.7■□□□□ 0.26
PTPN21-208ENST00000556564 FLYWCH1Q4VC44 716 aa16.7■□□□□ 0.26
PTPN21-208ENST00000556564 CATSPEREQ5SY80 951 aa16.7■□□□□ 0.26
PTPN21-208ENST00000556564 EID2Q8N6I1 236 aa16.7■□□□□ 0.26
PTPN21-208ENST00000556564 PAIP1Q9H074 479 aaKnown RBP16.7■□□□□ 0.26
PTPN21-208ENST00000556564 TPT1P8Q9HAU6 139 aa16.7■□□□□ 0.26
PTPN21-208ENST00000556564 NPIPA1Q9UND3 350 aa16.7■□□□□ 0.26
PTPN21-208ENST00000556564 NFS1Q9Y697 457 aa16.7■□□□□ 0.26
PTPN21-208ENST00000556564 CPNE3O75131 537 aaKnown RBP16.69■□□□□ 0.26
PTPN21-208ENST00000556564 LINGO3P0C6S8 592 aa16.69■□□□□ 0.26
PTPN21-208ENST00000556564 IL1RNP18510 177 aa16.69■□□□□ 0.26
PTPN21-208ENST00000556564 CD38P28907 300 aa16.69■□□□□ 0.26
PTPN21-208ENST00000556564 RHAGQ02094 409 aa16.69■□□□□ 0.26
PTPN21-208ENST00000556564 TLR1Q15399 786 aa16.69■□□□□ 0.26
PTPN21-208ENST00000556564 DUSP6Q16828 381 aa16.69■□□□□ 0.26
PTPN21-208ENST00000556564 GPR107Q5VW38 600 aa16.69■□□□□ 0.26
PTPN21-208ENST00000556564 RNF111Q6ZNA4 994 aa16.69■□□□□ 0.26
PTPN21-208ENST00000556564 CAMK1GQ96NX5 476 aa16.69■□□□□ 0.26
PTPN21-208ENST00000556564 CCNB1IP1Q9NPC3 277 aa16.69■□□□□ 0.26
PTPN21-208ENST00000556564 ABLIM3O94929 683 aa16.69■□□□□ 0.26
PTPN21-208ENST00000556564 PYDC2Q56P42 97 aa16.69■□□□□ 0.26
PTPN21-208ENST00000556564 RTP3Q9BQQ7 232 aa16.69■□□□□ 0.26
PTPN21-208ENST00000556564 PTGES2Q9H7Z7 377 aa16.69■□□□□ 0.26
PTPN21-208ENST00000556564 BRWD3Q6RI45 1802 aa16.69■□□□□ 0.26
PTPN21-208ENST00000556564 ATP1A4Q13733 1029 aa16.69■□□□□ 0.26
PTPN21-208ENST00000556564 UNC50Q53HI1 259 aa16.69■□□□□ 0.26
PTPN21-208ENST00000556564 HMGN2P46Q86SG4 172 aa16.69■□□□□ 0.26
PTPN21-208ENST00000556564 LINC01465Q8N7H1 131 aa16.69■□□□□ 0.26
PTPN21-208ENST00000556564 EFHD2Q96C19 240 aaPredicted RBP16.69■□□□□ 0.26
PTPN21-208ENST00000556564 TBC1D17Q9HA65 648 aa16.69■□□□□ 0.26
PTPN21-208ENST00000556564 SMPD3Q9NY59 655 aaPredicted RBP16.69■□□□□ 0.26
PTPN21-208ENST00000556564 RCVRNP35243 200 aa16.69■□□□□ 0.26
PTPN21-208ENST00000556564 RANBP1P43487 201 aa16.69■□□□□ 0.26
PTPN21-208ENST00000556564 CD47Q08722 323 aa16.69■□□□□ 0.26
PTPN21-208ENST00000556564 SIX1Q15475 284 aaPredicted RBP16.69■□□□□ 0.26
PTPN21-208ENST00000556564 KDELC1Q6UW63 502 aa16.69■□□□□ 0.26
PTPN21-208ENST00000556564 AHSA2Q719I0 299 aa16.69■□□□□ 0.26
PTPN21-208ENST00000556564 CHFRQ96EP1 664 aa16.69■□□□□ 0.26
PTPN21-208ENST00000556564 ZFR2Q9UPR6 939 aaKnown RBP16.69■□□□□ 0.26
PTPN21-208ENST00000556564 PDE10AQ9Y233 779 aa16.69■□□□□ 0.26
PTPN21-208ENST00000556564 BHMG1C9JSJ3 638 aaPredicted RBP16.69■□□□□ 0.26
PTPN21-208ENST00000556564 ABLIM1O14639 778 aa16.69■□□□□ 0.26
PTPN21-208ENST00000556564 KCNJ13O60928 360 aa16.69■□□□□ 0.26
PTPN21-208ENST00000556564 RGRP47804 291 aa16.69■□□□□ 0.26
PTPN21-208ENST00000556564 SHC2P98077 582 aa16.69■□□□□ 0.26
PTPN21-208ENST00000556564 GPR153Q6NV75 609 aa16.69■□□□□ 0.26
PTPN21-208ENST00000556564 APLFQ8IW19 511 aaPredicted RBP16.69■□□□□ 0.26
PTPN21-208ENST00000556564 HUS1BQ8NHY5 278 aa16.69■□□□□ 0.26
PTPN21-208ENST00000556564 RHEBL1Q8TAI7 183 aa16.69■□□□□ 0.26
PTPN21-208ENST00000556564 GEMIN6Q8WXD5 167 aaKnown RBP16.69■□□□□ 0.26
PTPN21-208ENST00000556564 SEC61A2Q9H9S3 476 aa16.69■□□□□ 0.26
PTPN21-208ENST00000556564 E7EQ34 232 aa16.68■□□□□ 0.26
PTPN21-208ENST00000556564 CASKO14936 926 aa16.68■□□□□ 0.26
PTPN21-208ENST00000556564 BCAT2O15382 392 aaPredicted RBP16.68■□□□□ 0.26
PTPN21-208ENST00000556564 CHST10O43529 356 aa16.68■□□□□ 0.26
PTPN21-208ENST00000556564 TSC22D2O75157 780 aa16.68■□□□□ 0.26
PTPN21-208ENST00000556564 OR12D1P0DN82 309 aa16.68■□□□□ 0.26
PTPN21-208ENST00000556564 OR10G2Q8NGC3 310 aa16.68■□□□□ 0.26
PTPN21-208ENST00000556564 SNRNP27Q8WVK2 155 aaKnown RBP16.68■□□□□ 0.26
PTPN21-208ENST00000556564 RFKQ969G6 155 aa16.68■□□□□ 0.26
PTPN21-208ENST00000556564 ARAP2Q8WZ64 1704 aa16.68■□□□□ 0.26
PTPN21-208ENST00000556564 FGF3P11487 239 aaPredicted RBP16.68■□□□□ 0.26
PTPN21-208ENST00000556564 RNH1P13489 461 aaKnown RBP16.68■□□□□ 0.26
PTPN21-208ENST00000556564 RNASE12Q5GAN4 147 aaKnown RBP16.68■□□□□ 0.26
PTPN21-208ENST00000556564 IER5LQ5T953 404 aa16.68■□□□□ 0.26
PTPN21-208ENST00000556564 THAP5Q7Z6K1 395 aa16.68■□□□□ 0.26
PTPN21-208ENST00000556564 GALNT10Q86SR1 603 aa16.68■□□□□ 0.26
PTPN21-208ENST00000556564 PROKR2Q8NFJ6 384 aa16.68■□□□□ 0.26
PTPN21-208ENST00000556564 TBX21Q9UL17 535 aa16.68■□□□□ 0.26
PTPN21-208ENST00000556564 ARPC2O15144 300 aa16.68■□□□□ 0.26
PTPN21-208ENST00000556564 DCNP07585 359 aaKnown RBP16.68■□□□□ 0.26
PTPN21-208ENST00000556564 CRB2Q5IJ48 1285 aa16.68■□□□□ 0.26
PTPN21-208ENST00000556564 RANBP10Q6VN20 620 aa16.68■□□□□ 0.26
PTPN21-208ENST00000556564 NUP43Q8NFH3 380 aa16.68■□□□□ 0.26
PTPN21-208ENST00000556564 EPYCQ99645 322 aa16.68■□□□□ 0.26
PTPN21-208ENST00000556564 TRIM2Q9C040 744 aa16.68■□□□□ 0.26
PTPN21-208ENST00000556564 IRAK3Q9Y616 596 aa16.68■□□□□ 0.26
PTPN21-208ENST00000556564 OAS3Q9Y6K5 1087 aaKnown RBP16.68■□□□□ 0.26
PTPN21-208ENST00000556564 LINC01565O15544 149 aa16.68■□□□□ 0.26
PTPN21-208ENST00000556564 SNX4O95219 450 aa16.68■□□□□ 0.26
PTPN21-208ENST00000556564 EEFSECP57772 596 aaKnown RBP16.68■□□□□ 0.26
PTPN21-208ENST00000556564 ADGRD2Q7Z7M1 963 aa16.68■□□□□ 0.26
PTPN21-208ENST00000556564 PACS2Q86VP3 889 aa16.68■□□□□ 0.26
PTPN21-208ENST00000556564 RPF2Q9H7B2 306 aaKnown RBP16.68■□□□□ 0.26
PTPN21-208ENST00000556564 CMTM6Q9NX76 183 aa16.68■□□□□ 0.26
PTPN21-208ENST00000556564 PRODH2Q9UF12 536 aa16.68■□□□□ 0.26
PTPN21-208ENST00000556564 WDR45Q9Y484 360 aa16.68■□□□□ 0.26
PTPN21-208ENST00000556564 UQCRC2P22695 453 aa16.68■□□□□ 0.26
PTPN21-208ENST00000556564 PLCXD2Q0VAA5 305 aa16.68■□□□□ 0.26
PTPN21-208ENST00000556564 PKDCCQ504Y2 493 aa16.68■□□□□ 0.26
PTPN21-208ENST00000556564 PHTF2Q8N3S3 785 aa16.68■□□□□ 0.26
PTPN21-208ENST00000556564 POLR2J3Q9H1A7 115 aaKnown RBP16.68■□□□□ 0.26
PTPN21-208ENST00000556564 MATN2O00339 956 aa16.67■□□□□ 0.26
PTPN21-208ENST00000556564 TIA1P31483 386 aaKnown RBP eCLIP16.67■□□□□ 0.26
PTPN21-208ENST00000556564 PLGRKTQ9HBL7 147 aa16.67■□□□□ 0.26
PTPN21-208ENST00000556564 PRSS16Q9NQE7 514 aa16.67■□□□□ 0.26
PTPN21-208ENST00000556564 ACTR10Q9NZ32 417 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms