RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 SCAND1P57086 179 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 ERVPABLB-1P60509 514 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 VBP1P61758 197 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 PPP1CAP62136 330 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 MC2RQ01718 297 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 POU4F1Q01851 419 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 NAB1Q13506 487 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 CYLC2Q14093 348 aaPredicted RBP6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 USP10Q14694 798 aaKnown RBP6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 KIR2DS3Q14952 304 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 SPCS2Q15005 226 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 MAPKAPK3Q16644 382 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 ERCC6LQ2NKX8 1250 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 SAMD5Q5TGI4 173 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 ARMC6Q6NXE6 501 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 UNQ6494/PRO21346Q6UXR6 183 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 TRMT10CQ7L0Y3 403 aaKnown RBP6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 PIWIL4Q7Z3Z4 852 aaKnown RBP6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 GALNTL5Q7Z4T8 443 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 PRSS42Q7Z5A4 293 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 KMT5CQ86Y97 462 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 CEP97Q8IW35 865 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 KRT78Q8N1N4 520 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 BMPERQ8N8U9 685 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 LINC01555Q8NAE3 123 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 OR9A1PQ8NGU1 263 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 OR2L8Q8NGY9 312 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 FLVCR1-AS1Q8TAF5 88 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 HMGCLL1Q8TB92 370 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 DENND1AQ8TEH3 1009 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 DLG3Q92796 817 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 GFM2Q969S9 779 aaKnown RBP6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 KIAA1191Q96A73 305 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 SLC22A18Q96BI1 424 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 NXPE2Q96DL1 559 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 SLC47A1Q96FL8 570 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 SLC41A2Q96JW4 573 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 OR2A14Q96R47 310 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 SMC6Q96SB8 1091 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 GPR22Q99680 433 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 SLC12A9Q9BXP2 914 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 NDEL1Q9GZM8 345 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 CCDC86Q9H6F5 360 aaKnown RBP6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 ACSS3Q9H6R3 686 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 POPDC3Q9HBV1 291 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 SYTL2Q9HCH5 934 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 ASCL3Q9NQ33 180 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 CCDC177Q9NQR7 707 aaPredicted RBP6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 FBXO8Q9NRD0 319 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 C1GALT1Q9NS00 363 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 OCIAD1Q9NX40 245 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 SPHK1Q9NYA1 384 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 LNPEPQ9UIQ6 1025 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 ADAM30Q9UKF2 790 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 POMT2Q9UKY4 750 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 BAG5Q9UL15 447 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 SLC39A10Q9ULF5 831 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 PLAGL1Q9UM63 463 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 LOXL2Q9Y4K0 774 aa6.02□□□□□ -1.44
ATPAF1-209ENST00000529214 ASPMQ8IZT6 3477 aa6.02□□□□□ -1.45
ATPAF1-209ENST00000529214 HMX2A2RU54 273 aa6.02□□□□□ -1.45
ATPAF1-209ENST00000529214 GSAPA4D1B5 854 aa6.02□□□□□ -1.45
ATPAF1-209ENST00000529214 KRT87PA6NCN2 255 aa6.02□□□□□ -1.45
ATPAF1-209ENST00000529214 TLCD2A6NGC4 264 aa6.02□□□□□ -1.45
ATPAF1-209ENST00000529214 EFCAB7A8K855 629 aa6.02□□□□□ -1.45
ATPAF1-209ENST00000529214 CDRT15L2A8MXV6 281 aa6.02□□□□□ -1.45
ATPAF1-209ENST00000529214 PSMD9O00233 223 aa6.02□□□□□ -1.45
ATPAF1-209ENST00000529214 TAF4O00268 1085 aa6.02□□□□□ -1.45
ATPAF1-209ENST00000529214 SLC16A5O15375 505 aa6.02□□□□□ -1.45
ATPAF1-209ENST00000529214 TUSC2O75896 110 aa6.02□□□□□ -1.45
ATPAF1-209ENST00000529214 RASSF9O75901 435 aa6.02□□□□□ -1.45
ATPAF1-209ENST00000529214 WISP3O95389 354 aaPredicted RBP6.02□□□□□ -1.45
ATPAF1-209ENST00000529214 HSPA4LO95757 839 aa6.02□□□□□ -1.45
ATPAF1-209ENST00000529214 C8GP07360 202 aa6.02□□□□□ -1.45
ATPAF1-209ENST00000529214 ITGA2BP08514 1039 aa6.02□□□□□ -1.45
ATPAF1-209ENST00000529214 ERGP11308 486 aa6.02□□□□□ -1.45
ATPAF1-209ENST00000529214 UGT2B7P16662 529 aa6.02□□□□□ -1.45
ATPAF1-209ENST00000529214 ZNF37AP17032 561 aaPredicted RBP6.02□□□□□ -1.45
ATPAF1-209ENST00000529214 PRKACAP17612 351 aa6.02□□□□□ -1.45
ATPAF1-209ENST00000529214 TNFSF4P23510 183 aa6.02□□□□□ -1.45
ATPAF1-209ENST00000529214 MAP4P27816 1152 aaKnown RBP6.02□□□□□ -1.45
ATPAF1-209ENST00000529214 RBMS1P29558 406 aaKnown RBP6.02□□□□□ -1.45
ATPAF1-209ENST00000529214 PEBP1P30086 187 aaKnown RBP6.02□□□□□ -1.45
ATPAF1-209ENST00000529214 PKLRP30613 574 aa6.02□□□□□ -1.45
ATPAF1-209ENST00000529214 ALDH3A1P30838 453 aa6.02□□□□□ -1.45
ATPAF1-209ENST00000529214 LSP1P33241 339 aa6.02□□□□□ -1.45
ATPAF1-209ENST00000529214 HNF4AP41235 474 aa6.02□□□□□ -1.45
ATPAF1-209ENST00000529214 BDKRB1P46663 353 aa6.02□□□□□ -1.45
ATPAF1-209ENST00000529214 GFRA1P56159 465 aa6.02□□□□□ -1.45
ATPAF1-209ENST00000529214 POLR2GP62487 172 aaKnown RBP eCLIP6.02□□□□□ -1.45
ATPAF1-209ENST00000529214 HSD11B2P80365 405 aa6.02□□□□□ -1.45
ATPAF1-209ENST00000529214 GUCY1A3Q02108 690 aa6.02□□□□□ -1.45
ATPAF1-209ENST00000529214 SLC29A2Q14542 456 aa6.02□□□□□ -1.45
ATPAF1-209ENST00000529214 ARHGAP19Q14CB8 494 aa6.02□□□□□ -1.45
ATPAF1-209ENST00000529214 EFTUD2Q15029 972 aaKnown RBP eCLIP6.02□□□□□ -1.453e-6■■■■■ 41.9
ATPAF1-209ENST00000529214 ZNF124Q15973 351 aa6.02□□□□□ -1.45
ATPAF1-209ENST00000529214 CYP2A13Q16696 494 aa6.02□□□□□ -1.45
ATPAF1-209ENST00000529214 AARDQ4LEZ3 155 aa6.02□□□□□ -1.45
ATPAF1-209ENST00000529214 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms