RNA–Protein interactions for RNA: ENST00000516470.1

RNU6-406P-201, Transcript of RNA, U6 small nuclear 406, pseudogene, humanhuman

BASIC

Gene RNU6-406P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-406P-201ENST00000516470 ADARB1P78563 741 aaKnown RBP-0.59□□□□□ -2.5
RNU6-406P-201ENST00000516470 KLC1Q07866 573 aa-0.59□□□□□ -2.5
RNU6-406P-201ENST00000516470 BIRC3Q13489 604 aa-0.59□□□□□ -2.5
RNU6-406P-201ENST00000516470 QRICH1Q2TAL8 776 aa-0.59□□□□□ -2.5
RNU6-406P-201ENST00000516470 C6orf136Q5SQH8 315 aa-0.59□□□□□ -2.5
RNU6-406P-201ENST00000516470 TTC19Q6DKK2 380 aaPredicted RBP-0.59□□□□□ -2.5
RNU6-406P-201ENST00000516470 C11orf63Q6NUN7 778 aa-0.59□□□□□ -2.5
RNU6-406P-201ENST00000516470 PHOSPHO2Q8TCD6 241 aa-0.59□□□□□ -2.5
RNU6-406P-201ENST00000516470 SMARCE1Q969G3 411 aa-0.59□□□□□ -2.5
RNU6-406P-201ENST00000516470 APOPT1Q96IL0 206 aa-0.59□□□□□ -2.5
RNU6-406P-201ENST00000516470 ZMYND12Q9H0C1 365 aa-0.59□□□□□ -2.5
RNU6-406P-201ENST00000516470 POLR1BQ9H9Y6 1135 aa-0.59□□□□□ -2.5
RNU6-406P-201ENST00000516470 TBC1D17Q9HA65 648 aa-0.59□□□□□ -2.5
RNU6-406P-201ENST00000516470 CHMP1AQ9HD42 196 aaPredicted RBP-0.59□□□□□ -2.5
RNU6-406P-201ENST00000516470 SMC4Q9NTJ3 1288 aa-0.59□□□□□ -2.5
RNU6-406P-201ENST00000516470 SETD4Q9NVD3 440 aa-0.59□□□□□ -2.5
RNU6-406P-201ENST00000516470 PAG1Q9NWQ8 432 aa-0.59□□□□□ -2.5
RNU6-406P-201ENST00000516470 ZNF148Q9UQR1 794 aa-0.59□□□□□ -2.5
RNU6-406P-201ENST00000516470 BCLAF3A2AJT9 711 aaKnown RBP-0.6□□□□□ -2.51
RNU6-406P-201ENST00000516470 EFCAB7A8K855 629 aa-0.6□□□□□ -2.51
RNU6-406P-201ENST00000516470 FBP2O00757 339 aa-0.6□□□□□ -2.51
RNU6-406P-201ENST00000516470 RSL1D1O76021 490 aaKnown RBP-0.6□□□□□ -2.51
RNU6-406P-201ENST00000516470 ACVR1BP36896 505 aa-0.6□□□□□ -2.51
RNU6-406P-201ENST00000516470 RXRGP48443 463 aa-0.6□□□□□ -2.51
RNU6-406P-201ENST00000516470 CACNG7P62955 275 aa-0.6□□□□□ -2.51
RNU6-406P-201ENST00000516470 MADCAM1Q13477 382 aa-0.6□□□□□ -2.51
RNU6-406P-201ENST00000516470 IQCCQ4KMZ1 466 aa-0.6□□□□□ -2.51
RNU6-406P-201ENST00000516470 ZRANB3Q5FWF4 1079 aa-0.6□□□□□ -2.51
RNU6-406P-201ENST00000516470 FGD3Q5JSP0 725 aa-0.6□□□□□ -2.51
RNU6-406P-201ENST00000516470 SPANXN4Q5MJ08 99 aa-0.6□□□□□ -2.51
RNU6-406P-201ENST00000516470 RARS2Q5T160 578 aaKnown RBP-0.6□□□□□ -2.51
RNU6-406P-201ENST00000516470 LIPJQ5W064 366 aa-0.6□□□□□ -2.51
RNU6-406P-201ENST00000516470 ANO1Q5XXA6 986 aa-0.6□□□□□ -2.51
RNU6-406P-201ENST00000516470 TMPRSS11BQ86T26 416 aa-0.6□□□□□ -2.51
RNU6-406P-201ENST00000516470 Q8NDZ9 215 aa-0.6□□□□□ -2.51
RNU6-406P-201ENST00000516470 SMARCD2Q92925 531 aa-0.6□□□□□ -2.51
RNU6-406P-201ENST00000516470 ELMOD3Q96FG2 381 aa-0.6□□□□□ -2.51
RNU6-406P-201ENST00000516470 RBM18Q96H35 190 aaKnown RBP-0.6□□□□□ -2.51
RNU6-406P-201ENST00000516470 ALKBH3Q96Q83 286 aaPredicted RBP-0.6□□□□□ -2.51
RNU6-406P-201ENST00000516470 TNMDQ9H2S6 317 aa-0.6□□□□□ -2.51
RNU6-406P-201ENST00000516470 NLRC4Q9NPP4 1024 aa-0.6□□□□□ -2.51
RNU6-406P-201ENST00000516470 RNF24Q9Y225 148 aa-0.6□□□□□ -2.51
RNU6-406P-201ENST00000516470 CADPSQ9ULU8 1353 aa-0.6□□□□□ -2.51
RNU6-406P-201ENST00000516470 RNF123Q5XPI4 1314 aa-0.61□□□□□ -2.51
RNU6-406P-201ENST00000516470 MACF1Q9UPN3 7388 aaKnown RBP-0.61□□□□□ -2.51
RNU6-406P-201ENST00000516470 RNH1P13489 461 aaKnown RBP-0.61□□□□□ -2.51
RNU6-406P-201ENST00000516470 HARS2P49590 506 aaKnown RBP-0.61□□□□□ -2.51
RNU6-406P-201ENST00000516470 OLR1P78380 273 aa-0.61□□□□□ -2.51
RNU6-406P-201ENST00000516470 MAT1AQ00266 395 aaKnown RBP-0.61□□□□□ -2.51
RNU6-406P-201ENST00000516470 TMEM115Q12893 351 aaPredicted RBP-0.61□□□□□ -2.51
RNU6-406P-201ENST00000516470 CNPY1Q3B7I2 92 aa-0.61□□□□□ -2.51
RNU6-406P-201ENST00000516470 ABCA11PQ4W5N1 156 aa-0.61□□□□□ -2.51
RNU6-406P-201ENST00000516470 LRTM2Q8N967 370 aa-0.61□□□□□ -2.51
RNU6-406P-201ENST00000516470 RDH5Q92781 318 aa-0.61□□□□□ -2.51
RNU6-406P-201ENST00000516470 INTS12Q96CB8 462 aaKnown RBP-0.61□□□□□ -2.51
RNU6-406P-201ENST00000516470 CDCA3Q99618 268 aaPredicted RBP-0.61□□□□□ -2.51
RNU6-406P-201ENST00000516470 SPG21Q9NZD8 308 aa-0.61□□□□□ -2.51
RNU6-406P-201ENST00000516470 APOBEC3BQ9UH17 382 aaKnown RBP-0.61□□□□□ -2.51
RNU6-406P-201ENST00000516470 OPN4Q9UHM6 478 aa-0.61□□□□□ -2.51
RNU6-406P-201ENST00000516470 IGLV8-61A0A075B6I0 122 aa-0.62□□□□□ -2.51
RNU6-406P-201ENST00000516470 MED24O75448 989 aa-0.62□□□□□ -2.51
RNU6-406P-201ENST00000516470 MRPL3P09001 348 aaKnown RBP-0.62□□□□□ -2.51
RNU6-406P-201ENST00000516470 P0C880 135 aa-0.62□□□□□ -2.51
RNU6-406P-201ENST00000516470 KRT3P12035 628 aa-0.62□□□□□ -2.51
RNU6-406P-201ENST00000516470 ICAM3P32942 547 aa-0.62□□□□□ -2.51
RNU6-406P-201ENST00000516470 RPS27AP62979 156 aaKnown RBP-0.62□□□□□ -2.51
RNU6-406P-201ENST00000516470 KRT33BQ14525 404 aa-0.62□□□□□ -2.51
RNU6-406P-201ENST00000516470 C5orf47Q569G3 176 aa-0.62□□□□□ -2.51
RNU6-406P-201ENST00000516470 FAM69AQ5T7M9 428 aa-0.62□□□□□ -2.51
RNU6-406P-201ENST00000516470 TATDN1Q6P1N9 297 aa-0.62□□□□□ -2.51
RNU6-406P-201ENST00000516470 DND1Q8IYX4 353 aaKnown RBP-0.62□□□□□ -2.51
RNU6-406P-201ENST00000516470 XXYLT1Q8NBI6 393 aa-0.62□□□□□ -2.51
RNU6-406P-201ENST00000516470 PAPD5Q8NDF8 572 aaKnown RBP-0.62□□□□□ -2.51
RNU6-406P-201ENST00000516470 AENQ8WTP8 325 aaKnown RBP-0.62□□□□□ -2.51
RNU6-406P-201ENST00000516470 KLHL5Q96PQ7 755 aa-0.62□□□□□ -2.51
RNU6-406P-201ENST00000516470 NRTNQ99748 197 aa-0.62□□□□□ -2.51
RNU6-406P-201ENST00000516470 OSBPL11Q9BXB4 747 aa-0.62□□□□□ -2.51
RNU6-406P-201ENST00000516470 C3orf14Q9HBI5 128 aa-0.62□□□□□ -2.51
RNU6-406P-201ENST00000516470 NPHP3Q7Z494 1330 aa-0.63□□□□□ -2.51
RNU6-406P-201ENST00000516470 CACNA1DQ01668 2161 aa-0.63□□□□□ -2.51
RNU6-406P-201ENST00000516470 C2CD4DB7Z1M9 353 aa-0.63□□□□□ -2.51
RNU6-406P-201ENST00000516470 MCF2LO15068 1137 aa-0.63□□□□□ -2.51
RNU6-406P-201ENST00000516470 FRAT2O75474 233 aaPredicted RBP-0.63□□□□□ -2.51
RNU6-406P-201ENST00000516470 RETP07949 1114 aa-0.63□□□□□ -2.51
RNU6-406P-201ENST00000516470 CCDC166P0CW27 439 aa-0.63□□□□□ -2.51
RNU6-406P-201ENST00000516470 CCNCP24863 283 aa-0.63□□□□□ -2.51
RNU6-406P-201ENST00000516470 IL2RGP31785 369 aa-0.63□□□□□ -2.51
RNU6-406P-201ENST00000516470 PBX3P40426 434 aa-0.63□□□□□ -2.51
RNU6-406P-201ENST00000516470 VAMP7P51809 220 aa-0.63□□□□□ -2.51
RNU6-406P-201ENST00000516470 CD47Q08722 323 aa-0.63□□□□□ -2.51
RNU6-406P-201ENST00000516470 PTP4A2Q12974 167 aa-0.63□□□□□ -2.51
RNU6-406P-201ENST00000516470 OPCMLQ14982 345 aa-0.63□□□□□ -2.51
RNU6-406P-201ENST00000516470 CLEC17AQ6ZS10 378 aa-0.63□□□□□ -2.51
RNU6-406P-201ENST00000516470 TMEM179BQ7Z7N9 219 aa-0.63□□□□□ -2.51
RNU6-406P-201ENST00000516470 ARID3BQ8IVW6 561 aaPredicted RBP-0.63□□□□□ -2.51
RNU6-406P-201ENST00000516470 SCYL3Q8IZE3 742 aa-0.63□□□□□ -2.51
RNU6-406P-201ENST00000516470 CASP10Q92851 521 aa-0.63□□□□□ -2.51
RNU6-406P-201ENST00000516470 SLC35E1Q96K37 410 aa-0.63□□□□□ -2.51
RNU6-406P-201ENST00000516470 NXF3Q9H4D5 531 aaKnown RBP-0.63□□□□□ -2.51
RNU6-406P-201ENST00000516470 CCPG1Q9ULG6 757 aa-0.63□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms