RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, human

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX41-215	ENST00000512431	TCF12	Q99081	682 aa		11.7	□□□□□ -0.54
DDX41-215	ENST00000512431	PCBD2	Q9H0N5	130 aa		11.7	□□□□□ -0.54
DDX41-215	ENST00000512431	BEX4	Q9NWD9	120 aa	Predicted RBP	11.7	□□□□□ -0.54
DDX41-215	ENST00000512431	FOXD3	Q9UJU5	478 aa	Predicted RBP	11.7	□□□□□ -0.54
DDX41-215	ENST00000512431	PHF3	Q92576	2039 aa	Known RBP	11.7	□□□□□ -0.54
DDX41-215	ENST00000512431		A0A1B0GVC2	190 aa		11.69	□□□□□ -0.54
DDX41-215	ENST00000512431	AQP7	O14520	342 aa		11.69	□□□□□ -0.54
DDX41-215	ENST00000512431	DVL2	O14641	736 aa		11.69	□□□□□ -0.54
DDX41-215	ENST00000512431	GALR3	O60755	368 aa	Predicted RBP	11.69	□□□□□ -0.54
DDX41-215	ENST00000512431	IGHG3	P01860	377 aa		11.69	□□□□□ -0.54
DDX41-215	ENST00000512431	ALOX12	P18054	663 aa		11.69	□□□□□ -0.54
DDX41-215	ENST00000512431	ADH7	P40394	386 aa		11.69	□□□□□ -0.54
DDX41-215	ENST00000512431	MAN2A2	P49641	1150 aa		11.69	□□□□□ -0.54
DDX41-215	ENST00000512431	ASCL1	P50553	236 aa		11.69	□□□□□ -0.54
DDX41-215	ENST00000512431	DCAF7	P61962	342 aa		11.69	□□□□□ -0.54
DDX41-215	ENST00000512431	BTG2	P78543	158 aa		11.69	□□□□□ -0.54
DDX41-215	ENST00000512431	KCNJ11	Q14654	390 aa		11.69	□□□□□ -0.54
DDX41-215	ENST00000512431	SPA17	Q15506	151 aa		11.69	□□□□□ -0.54
DDX41-215	ENST00000512431	DEFB134	Q4QY38	66 aa		11.69	□□□□□ -0.54
DDX41-215	ENST00000512431	RTL6	Q6ICC9	239 aa		11.69	□□□□□ -0.54
DDX41-215	ENST00000512431	IL20RB	Q6UXL0	311 aa		11.69	□□□□□ -0.54
DDX41-215	ENST00000512431	TRIL	Q7L0X0	811 aa		11.69	□□□□□ -0.54
DDX41-215	ENST00000512431	C17orf64	Q86WR6	236 aa		11.69	□□□□□ -0.54
DDX41-215	ENST00000512431	SLC13A5	Q86YT5	568 aa	Predicted RBP	11.69	□□□□□ -0.54
DDX41-215	ENST00000512431	LRRC56	Q8IYG6	542 aa	Predicted RBP	11.69	□□□□□ -0.54
DDX41-215	ENST00000512431	FAM109A	Q8N4B1	249 aa		11.69	□□□□□ -0.54
DDX41-215	ENST00000512431	B3GNT7	Q8NFL0	401 aa		11.69	□□□□□ -0.54
DDX41-215	ENST00000512431	ASB15	Q8WXK1	588 aa		11.69	□□□□□ -0.54
DDX41-215	ENST00000512431	RNASE6	Q93091	150 aa	Known RBP	11.69	□□□□□ -0.54
DDX41-215	ENST00000512431	FAM173A	Q9BQD7	235 aa		11.69	□□□□□ -0.54
DDX41-215	ENST00000512431	TTTY12	Q9BZ98	90 aa		11.69	□□□□□ -0.54
DDX41-215	ENST00000512431	PRDM9	Q9NQV7	894 aa		11.69	□□□□□ -0.54
DDX41-215	ENST00000512431	DEPP	Q9NTK1	212 aa		11.69	□□□□□ -0.54
DDX41-215	ENST00000512431	SAMD15	Q9P1V8	674 aa		11.69	□□□□□ -0.54
DDX41-215	ENST00000512431	MTRF1L	Q9UGC7	380 aa	Known RBP	11.69	□□□□□ -0.54
DDX41-215	ENST00000512431	DRG1	Q9Y295	367 aa	Known RBP	11.69	□□□□□ -0.54
DDX41-215	ENST00000512431	CRYL1	Q9Y2S2	319 aa		11.69	□□□□□ -0.54
DDX41-215	ENST00000512431	FLNA	P21333	2647 aa	Known RBP	11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	TCRBV16S1A1N1	A0A5B0	115 aa		11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	TUBAL3	A6NHL2	446 aa		11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	NDUFS4	O43181	175 aa		11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	SUSD5	O60279	629 aa		11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	LCMT2	O60294	686 aa	Known RBP	11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	ZFAND5	O76080	213 aa		11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	IFNB1	P01574	187 aa		11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	SERPIND1	P05546	499 aa		11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	APRT	P07741	180 aa		11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	EPX	P11678	715 aa		11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	MAOA	P21397	527 aa		11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	CNR1	P21554	472 aa		11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	TACR1	P25103	407 aa		11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	IMPA1	P29218	277 aa		11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	COIL	P38432	576 aa	Predicted RBP	11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	ADAR	P55265	1226 aa	Known RBP	11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	SESN2	P58004	480 aa	Predicted RBP	11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	OLR1	P78380	273 aa		11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	HYAL2	Q12891	473 aa		11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	SLC10A1	Q14973	349 aa		11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	RPS6KA1	Q15418	735 aa		11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	ABHD13	Q7L211	337 aa		11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	KIF18B	Q86Y91	864 aa		11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	CNGA4	Q8IV77	575 aa		11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	P3H2	Q8IVL5	708 aa		11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	AFAP1L2	Q8N4X5	818 aa		11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	TBC1D19	Q8N5T2	526 aa		11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	MFSD9	Q8NBP5	474 aa		11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	APCDD1L	Q8NCL9	501 aa		11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	SIMC1	Q8NDZ2	872 aa		11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	SLC35B2	Q8TB61	432 aa		11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	ASB11	Q8WXH4	323 aa		11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	LPGAT1	Q92604	370 aa		11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	SLCO2A1	Q92959	643 aa		11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	VMP1	Q96GC9	406 aa		11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	IL1RL2	Q9HB29	575 aa		11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	RAB6B	Q9NRW1	208 aa		11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	TREX1	Q9NSU2	369 aa		11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	GALP	Q9UBC7	116 aa		11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	TFR2	Q9UP52	801 aa		11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	VPS9D1	Q9Y2B5	631 aa		11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	PCDHA13	Q9Y5I0	950 aa		11.68	□□□□□ -0.54
DDX41-215	ENST00000512431	ATP6AP2	A0A1C7CYW4	349 aa		11.67	□□□□□ -0.54
DDX41-215	ENST00000512431	PINLYP	A6NC86	204 aa		11.67	□□□□□ -0.54
DDX41-215	ENST00000512431	AP3B1	O00203	1094 aa		11.67	□□□□□ -0.54
DDX41-215	ENST00000512431	CES2	O00748	559 aa		11.67	□□□□□ -0.54
DDX41-215	ENST00000512431	CEP104	O60308	925 aa		11.67	□□□□□ -0.54
DDX41-215	ENST00000512431	AVIL	O75366	819 aa		11.67	□□□□□ -0.54
DDX41-215	ENST00000512431	ATP6AP2	O75787	350 aa		11.67	□□□□□ -0.54
DDX41-215	ENST00000512431	MYO1D	O94832	1006 aa		11.67	□□□□□ -0.54
DDX41-215	ENST00000512431	GOSR1	O95249	250 aa		11.67	□□□□□ -0.54
DDX41-215	ENST00000512431	VAPB	O95292	243 aa		11.67	□□□□□ -0.54
DDX41-215	ENST00000512431	MPC1L	P0DKB6	136 aa		11.67	□□□□□ -0.54
DDX41-215	ENST00000512431	BMP5	P22003	454 aa		11.67	□□□□□ -0.54
DDX41-215	ENST00000512431	NMBR	P28336	390 aa		11.67	□□□□□ -0.54
DDX41-215	ENST00000512431	SKIV2L2	P42285	1042 aa	Known RBP	11.67	□□□□□ -0.54
DDX41-215	ENST00000512431	MAGEA5	P43359	124 aa		11.67	□□□□□ -0.54
DDX41-215	ENST00000512431	TBPL1	P62380	186 aa		11.67	□□□□□ -0.54
DDX41-215	ENST00000512431	PWP1	Q13610	501 aa		11.67	□□□□□ -0.54
DDX41-215	ENST00000512431	HECTD2	Q5U5R9	776 aa		11.67	□□□□□ -0.54
DDX41-215	ENST00000512431	UBE2R2	Q712K3	238 aa	Predicted RBP	11.67	□□□□□ -0.54
DDX41-215	ENST00000512431	TMEM251	Q8N6I4	163 aa		11.67	□□□□□ -0.54

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