RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 TFEBP19484 476 aa9.98□□□□□ -0.81
NELFE-213ENST00000494956 MAOAP21397 527 aa9.98□□□□□ -0.81
NELFE-213ENST00000494956 SPRP35270 261 aaPredicted RBP9.98□□□□□ -0.81
NELFE-213ENST00000494956 TSFMP43897 325 aaKnown RBP9.98□□□□□ -0.81
NELFE-213ENST00000494956 BTN3A2P78410 334 aa9.98□□□□□ -0.81
NELFE-213ENST00000494956 CAV1Q03135 178 aa9.98□□□□□ -0.81
NELFE-213ENST00000494956 ZNF33BQ06732 778 aa9.98□□□□□ -0.81
NELFE-213ENST00000494956 RUNX2Q13950 521 aa9.98□□□□□ -0.81
NELFE-213ENST00000494956 TLR1Q15399 786 aa9.98□□□□□ -0.81
NELFE-213ENST00000494956 UAP1Q16222 522 aaPredicted RBP9.98□□□□□ -0.81
NELFE-213ENST00000494956 GRTP1Q5TC63 336 aa9.98□□□□□ -0.81
NELFE-213ENST00000494956 RIPOR1Q6ZS17 1223 aa9.98□□□□□ -0.81
NELFE-213ENST00000494956 RAPH1Q70E73 1250 aa9.98□□□□□ -0.81
NELFE-213ENST00000494956 CYS1Q717R9 158 aa9.98□□□□□ -0.81
NELFE-213ENST00000494956 ABHD13Q7L211 337 aa9.98□□□□□ -0.81
NELFE-213ENST00000494956 KLHDC8AQ8IYD2 350 aa9.98□□□□□ -0.81
NELFE-213ENST00000494956 CYP4X1Q8N118 509 aa9.98□□□□□ -0.81
NELFE-213ENST00000494956 BEST3Q8N1M1 668 aa9.98□□□□□ -0.81
NELFE-213ENST00000494956 CA13Q8N1Q1 262 aa9.98□□□□□ -0.81
NELFE-213ENST00000494956 RNF175Q8N4F7 328 aa9.98□□□□□ -0.81
NELFE-213ENST00000494956 TBC1D19Q8N5T2 526 aa9.98□□□□□ -0.81
NELFE-213ENST00000494956 NOA1Q8NC60 698 aaKnown RBP9.98□□□□□ -0.81
NELFE-213ENST00000494956 TMEM52Q8NDY8 209 aa9.98□□□□□ -0.81
NELFE-213ENST00000494956 PLPP5Q8NEB5 264 aa9.98□□□□□ -0.81
NELFE-213ENST00000494956 KCTD4Q8WVF5 259 aa9.98□□□□□ -0.81
NELFE-213ENST00000494956 TBC1D20Q96BZ9 403 aa9.98□□□□□ -0.81
NELFE-213ENST00000494956 NXNL1Q96CM4 212 aa9.98□□□□□ -0.81
NELFE-213ENST00000494956 UBXN10Q96LJ8 280 aa9.98□□□□□ -0.81
NELFE-213ENST00000494956 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.98□□□□□ -0.81
NELFE-213ENST00000494956 KCNK13Q9HB14 408 aa9.98□□□□□ -0.81
NELFE-213ENST00000494956 NECTIN3Q9NQS3 549 aa9.98□□□□□ -0.81
NELFE-213ENST00000494956 IGSF5Q9NSI5 407 aa9.98□□□□□ -0.81
NELFE-213ENST00000494956 DNAJC11Q9NVH1 559 aa9.98□□□□□ -0.81
NELFE-213ENST00000494956 STMN3Q9NZ72 180 aa9.98□□□□□ -0.81
NELFE-213ENST00000494956 ERRFI1Q9UJM3 462 aaPredicted RBP9.98□□□□□ -0.81
NELFE-213ENST00000494956 ZNF490Q9ULM2 529 aaPredicted RBP9.98□□□□□ -0.81
NELFE-213ENST00000494956 RNF112Q9ULX5 631 aa9.98□□□□□ -0.81
NELFE-213ENST00000494956 CROCCQ5TZA2 2017 aa9.98□□□□□ -0.81
NELFE-213ENST00000494956 PRRC2CQ9Y520 2896 aaKnown RBP9.98□□□□□ -0.81
NELFE-213ENST00000494956 UTP20O75691 2785 aaKnown RBP9.97□□□□□ -0.81
NELFE-213ENST00000494956 RP1L1Q8IWN7 2480 aaPredicted RBP9.97□□□□□ -0.81
NELFE-213ENST00000494956 DYTNA2CJ06 578 aa9.97□□□□□ -0.81
NELFE-213ENST00000494956 LRRC14BA6NHZ5 514 aa9.97□□□□□ -0.81
NELFE-213ENST00000494956 MAGEB17A8MXT2 336 aa9.97□□□□□ -0.81
NELFE-213ENST00000494956 SUPT3HB4E1H0 165 aa9.97□□□□□ -0.81
NELFE-213ENST00000494956 TGFBR3LH3BV60 316 aa9.97□□□□□ -0.81
NELFE-213ENST00000494956 CLGNO14967 610 aa9.97□□□□□ -0.81
NELFE-213ENST00000494956 ERI3O43414 337 aaKnown RBP9.97□□□□□ -0.81
NELFE-213ENST00000494956 SUPT3HO75486 399 aa9.97□□□□□ -0.81
NELFE-213ENST00000494956 STK16O75716 305 aa9.97□□□□□ -0.81
NELFE-213ENST00000494956 SERPINA6P08185 405 aa9.97□□□□□ -0.81
NELFE-213ENST00000494956 GNAZP19086 355 aa9.97□□□□□ -0.81
NELFE-213ENST00000494956 PPP2R1BP30154 601 aa9.97□□□□□ -0.81
NELFE-213ENST00000494956 STX2P32856 288 aa9.97□□□□□ -0.81
NELFE-213ENST00000494956 HNMTP50135 292 aa9.97□□□□□ -0.81
NELFE-213ENST00000494956 TNFSF10P50591 281 aa9.97□□□□□ -0.81
NELFE-213ENST00000494956 HNRNPFP52597 415 aaKnown RBP9.97□□□□□ -0.81
NELFE-213ENST00000494956 PLA2G16P53816 162 aa9.97□□□□□ -0.81
NELFE-213ENST00000494956 OR4D2P58180 307 aa9.97□□□□□ -0.81
NELFE-213ENST00000494956 PMP22Q01453 160 aa9.97□□□□□ -0.81
NELFE-213ENST00000494956 CKAP4Q07065 602 aaKnown RBP9.97□□□□□ -0.81
NELFE-213ENST00000494956 ACTN3Q08043 901 aaPredicted RBP9.97□□□□□ -0.81
NELFE-213ENST00000494956 DOC2AQ14183 400 aa9.97□□□□□ -0.81
NELFE-213ENST00000494956 XKR6Q5GH73 641 aa9.97□□□□□ -0.81
NELFE-213ENST00000494956 MROH9Q5TGP6 573 aa9.97□□□□□ -0.81
NELFE-213ENST00000494956 ABHD17BQ5VST6 288 aa9.97□□□□□ -0.81
NELFE-213ENST00000494956 PLAG1Q6DJT9 500 aa9.97□□□□□ -0.81
NELFE-213ENST00000494956 SULT1C3Q6IMI6 304 aa9.97□□□□□ -0.81
NELFE-213ENST00000494956 TMIGD1Q6UXZ0 262 aa9.97□□□□□ -0.81
NELFE-213ENST00000494956 ISCA2Q86U28 154 aa9.97□□□□□ -0.81
NELFE-213ENST00000494956 CRLF3Q8IUI8 442 aa9.97□□□□□ -0.81
NELFE-213ENST00000494956 PDPRQ8NCN5 879 aa9.97□□□□□ -0.81
NELFE-213ENST00000494956 TRPV3Q8NET8 790 aa9.97□□□□□ -0.81
NELFE-213ENST00000494956 UHMK1Q8TAS1 419 aaKnown RBP9.97□□□□□ -0.81
NELFE-213ENST00000494956 SSC4DQ8WTU2 575 aa9.97□□□□□ -0.81
NELFE-213ENST00000494956 FAR1Q8WVX9 515 aa9.97□□□□□ -0.81
NELFE-213ENST00000494956 SREK1Q8WXA9 508 aaKnown RBP9.97□□□□□ -0.81
NELFE-213ENST00000494956 HAS2Q92819 552 aa9.97□□□□□ -0.81
NELFE-213ENST00000494956 KIAA1191Q96A73 305 aa9.97□□□□□ -0.81
NELFE-213ENST00000494956 MS4A6EQ96DS6 147 aa9.97□□□□□ -0.81
NELFE-213ENST00000494956 PTCHD1Q96NR3 888 aa9.97□□□□□ -0.81
NELFE-213ENST00000494956 SIGLEC12Q96PQ1 595 aa9.97□□□□□ -0.81
NELFE-213ENST00000494956 OR1F2PQ96R84 312 aa9.97□□□□□ -0.81
NELFE-213ENST00000494956 ATOH8Q96SQ7 321 aa9.97□□□□□ -0.81
NELFE-213ENST00000494956 HES7Q9BYE0 225 aa9.97□□□□□ -0.81
NELFE-213ENST00000494956 FAM129AQ9BZQ8 928 aa9.97□□□□□ -0.81
NELFE-213ENST00000494956 NINJ2Q9NZG7 142 aa9.97□□□□□ -0.81
NELFE-213ENST00000494956 C19orf25Q9UFG5 118 aaPredicted RBP9.97□□□□□ -0.81
NELFE-213ENST00000494956 PTBP2Q9UKA9 531 aaKnown RBP9.97□□□□□ -0.81
NELFE-213ENST00000494956 LRIT2A6NDA9 550 aa9.96□□□□□ -0.82
NELFE-213ENST00000494956 PRMT3O60678 531 aa9.96□□□□□ -0.82
NELFE-213ENST00000494956 H2AFYO75367 372 aaKnown RBP9.96□□□□□ -0.82
NELFE-213ENST00000494956 LTA4HP09960 611 aaKnown RBP9.96□□□□□ -0.82
NELFE-213ENST00000494956 MTHFD2P13995 350 aa9.96□□□□□ -0.82
NELFE-213ENST00000494956 CERS1P27544 350 aa9.96□□□□□ -0.82
NELFE-213ENST00000494956 COL8A1P27658 744 aa9.96□□□□□ -0.82
NELFE-213ENST00000494956 GGT5P36269 586 aa9.96□□□□□ -0.82
NELFE-213ENST00000494956 KCNK10P57789 538 aa9.96□□□□□ -0.82
NELFE-213ENST00000494956 SLC26A5P58743 744 aa9.96□□□□□ -0.82
NELFE-213ENST00000494956 ATP6V0D1P61421 351 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms