RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 ABRAXAS2Q15018 415 aa12.15□□□□□ -0.46
HDAC1-209ENST00000484305 NSDHLQ15738 373 aa12.15□□□□□ -0.46
HDAC1-209ENST00000484305 CRB2Q5IJ48 1285 aa12.15□□□□□ -0.46
HDAC1-209ENST00000484305 B3GNTL1Q67FW5 361 aaPredicted RBP12.15□□□□□ -0.46
HDAC1-209ENST00000484305 ADNP2Q6IQ32 1131 aa12.15□□□□□ -0.46
HDAC1-209ENST00000484305 NIPAL1Q6NVV3 410 aa12.15□□□□□ -0.46
HDAC1-209ENST00000484305 RIPOR1Q6ZS17 1223 aa12.15□□□□□ -0.46
HDAC1-209ENST00000484305 VN1R5Q7Z5H4 357 aa12.15□□□□□ -0.46
HDAC1-209ENST00000484305 CCDC91Q7Z6B0 441 aa12.15□□□□□ -0.46
HDAC1-209ENST00000484305 ATCAYQ86WG3 371 aa12.15□□□□□ -0.46
HDAC1-209ENST00000484305 IQCKQ8N0W5 287 aa12.15□□□□□ -0.46
HDAC1-209ENST00000484305 CISD2Q8N5K1 135 aaKnown RBP12.15□□□□□ -0.46
HDAC1-209ENST00000484305 PLPP5Q8NEB5 264 aa12.15□□□□□ -0.46
HDAC1-209ENST00000484305 DNAJB14Q8TBM8 379 aa12.15□□□□□ -0.46
HDAC1-209ENST00000484305 PPP4R1Q8TF05 950 aa12.15□□□□□ -0.46
HDAC1-209ENST00000484305 SLC44A1Q8WWI5 657 aa12.15□□□□□ -0.46
HDAC1-209ENST00000484305 CCT6BQ92526 530 aa12.15□□□□□ -0.46
HDAC1-209ENST00000484305 TSLPQ969D9 159 aa12.15□□□□□ -0.46
HDAC1-209ENST00000484305 TBC1D20Q96BZ9 403 aa12.15□□□□□ -0.46
HDAC1-209ENST00000484305 SNRNP40Q96DI7 357 aaKnown RBP12.15□□□□□ -0.46
HDAC1-209ENST00000484305 TRIM44Q96DX7 344 aaPredicted RBP12.15□□□□□ -0.46
HDAC1-209ENST00000484305 WDR34Q96EX3 536 aa12.15□□□□□ -0.46
HDAC1-209ENST00000484305 PTCD3Q96EY7 689 aaKnown RBP12.15□□□□□ -0.46
HDAC1-209ENST00000484305 LMF1Q96S06 567 aa12.15□□□□□ -0.46
HDAC1-209ENST00000484305 EPS8L2Q9H6S3 715 aa12.15□□□□□ -0.46
HDAC1-209ENST00000484305 MAP10Q9P2G4 905 aa12.15□□□□□ -0.46
HDAC1-209ENST00000484305 C19orf25Q9UFG5 118 aaPredicted RBP12.15□□□□□ -0.46
HDAC1-209ENST00000484305 VPS4AQ9UN37 437 aa12.15□□□□□ -0.46
HDAC1-209ENST00000484305 FLNBO75369 2602 aaKnown RBP12.15□□□□□ -0.46
HDAC1-209ENST00000484305 A0A096LPK6 155 aa12.14□□□□□ -0.47
HDAC1-209ENST00000484305 A0A0G2JN53 185 aa12.14□□□□□ -0.47
HDAC1-209ENST00000484305 LRIT2A6NDA9 550 aa12.14□□□□□ -0.47
HDAC1-209ENST00000484305 ANKDD1BA6NHY2 528 aa12.14□□□□□ -0.47
HDAC1-209ENST00000484305 MAGEB17A8MXT2 336 aa12.14□□□□□ -0.47
HDAC1-209ENST00000484305 FAM227AF5H4B4 570 aa12.14□□□□□ -0.47
HDAC1-209ENST00000484305 B4GALT2O60909 372 aa12.14□□□□□ -0.47
HDAC1-209ENST00000484305 CLEC3AO75596 197 aa12.14□□□□□ -0.47
HDAC1-209ENST00000484305 WFS1O76024 890 aa12.14□□□□□ -0.47
HDAC1-209ENST00000484305 KLHL2O95198 593 aa12.14□□□□□ -0.47
HDAC1-209ENST00000484305 ICAM2P13598 275 aa12.14□□□□□ -0.47
HDAC1-209ENST00000484305 GNLYP22749 145 aa12.14□□□□□ -0.47
HDAC1-209ENST00000484305 SERPINB8P50452 374 aa12.14□□□□□ -0.47
HDAC1-209ENST00000484305 STXBP1P61764 594 aaKnown RBP12.14□□□□□ -0.47
HDAC1-209ENST00000484305 BTN3A2P78410 334 aa12.14□□□□□ -0.47
HDAC1-209ENST00000484305 BTG2P78543 158 aa12.14□□□□□ -0.47
HDAC1-209ENST00000484305 SRSF1Q07955 248 aaKnown RBP eCLIP12.14□□□□□ -0.476e-10■□□□□ 10.6
HDAC1-209ENST00000484305 CHIT1Q13231 466 aa12.14□□□□□ -0.47
HDAC1-209ENST00000484305 FAM83EQ2M2I3 478 aa12.14□□□□□ -0.47
HDAC1-209ENST00000484305 SFT2D3Q587I9 215 aa12.14□□□□□ -0.47
HDAC1-209ENST00000484305 LRRC70Q7Z2Q7 622 aa12.14□□□□□ -0.47
HDAC1-209ENST00000484305 CA13Q8N1Q1 262 aa12.14□□□□□ -0.47
HDAC1-209ENST00000484305 CEP112Q8N8E3 955 aa12.14□□□□□ -0.47
HDAC1-209ENST00000484305 GALNT11Q8NCW6 608 aa12.14□□□□□ -0.47
HDAC1-209ENST00000484305 CATSPER1Q8NEC5 780 aa12.14□□□□□ -0.47
HDAC1-209ENST00000484305 TTLQ8NG68 377 aa12.14□□□□□ -0.47
HDAC1-209ENST00000484305 RHEBL1Q8TAI7 183 aa12.14□□□□□ -0.47
HDAC1-209ENST00000484305 UHMK1Q8TAS1 419 aaKnown RBP12.14□□□□□ -0.47
HDAC1-209ENST00000484305 UBTD2Q8WUN7 234 aa12.14□□□□□ -0.47
HDAC1-209ENST00000484305 MS4A6EQ96DS6 147 aa12.14□□□□□ -0.47
HDAC1-209ENST00000484305 CNDP1Q96KN2 507 aa12.14□□□□□ -0.47
HDAC1-209ENST00000484305 GPR78Q96P69 363 aa12.14□□□□□ -0.47
HDAC1-209ENST00000484305 PAFAH2Q99487 392 aa12.14□□□□□ -0.47
HDAC1-209ENST00000484305 PITHD1Q9GZP4 211 aaPredicted RBP12.14□□□□□ -0.47
HDAC1-209ENST00000484305 RHBGQ9H310 441 aa12.14□□□□□ -0.47
HDAC1-209ENST00000484305 ASF1BQ9NVP2 202 aa12.14□□□□□ -0.47
HDAC1-209ENST00000484305 PLA2G3Q9NZ20 509 aa12.14□□□□□ -0.47
HDAC1-209ENST00000484305 NFU1Q9UMS0 254 aa12.14□□□□□ -0.47
HDAC1-209ENST00000484305 PCDHGA10Q9Y5H3 936 aa12.14□□□□□ -0.47
HDAC1-209ENST00000484305 ASH1LQ9NR48 2969 aaKnown RBP12.14□□□□□ -0.47
HDAC1-209ENST00000484305 DOPEY2Q9Y3R5 2298 aa12.13□□□□□ -0.47
HDAC1-209ENST00000484305 TCP11X1B4DZS4 312 aa12.13□□□□□ -0.47
HDAC1-209ENST00000484305 POC1B-GALNT4F8VUJ3 575 aa12.13□□□□□ -0.47
HDAC1-209ENST00000484305 K7EPI3 171 aa12.13□□□□□ -0.47
HDAC1-209ENST00000484305 ERI3O43414 337 aaKnown RBP12.13□□□□□ -0.47
HDAC1-209ENST00000484305 INHBAP08476 426 aa12.13□□□□□ -0.47
HDAC1-209ENST00000484305 RNH1P13489 461 aaKnown RBP12.13□□□□□ -0.47
HDAC1-209ENST00000484305 JAK1P23458 1154 aa12.13□□□□□ -0.47
HDAC1-209ENST00000484305 GSTM2P28161 218 aa12.13□□□□□ -0.47
HDAC1-209ENST00000484305 CASP2P42575 452 aa12.13□□□□□ -0.47
HDAC1-209ENST00000484305 IRF8Q02556 426 aa12.13□□□□□ -0.47
HDAC1-209ENST00000484305 RUNX2Q13950 521 aa12.13□□□□□ -0.47
HDAC1-209ENST00000484305 E2F2Q14209 437 aa12.13□□□□□ -0.47
HDAC1-209ENST00000484305 ACAP2Q15057 778 aa12.13□□□□□ -0.47
HDAC1-209ENST00000484305 TBCCQ15814 346 aa12.13□□□□□ -0.47
HDAC1-209ENST00000484305 BTBD16Q32M84 506 aa12.13□□□□□ -0.47
HDAC1-209ENST00000484305 ADPRMQ3LIE5 342 aa12.13□□□□□ -0.47
HDAC1-209ENST00000484305 PLAG1Q6DJT9 500 aa12.13□□□□□ -0.47
HDAC1-209ENST00000484305 PLD6Q8N2A8 252 aaKnown RBP12.13□□□□□ -0.47
HDAC1-209ENST00000484305 DCAKDQ8WVC6 231 aa12.13□□□□□ -0.47
HDAC1-209ENST00000484305 GAL3ST3Q96A11 431 aa12.13□□□□□ -0.47
HDAC1-209ENST00000484305 SEC16BQ96JE7 1060 aa12.13□□□□□ -0.47
HDAC1-209ENST00000484305 FAR2Q96K12 515 aa12.13□□□□□ -0.47
HDAC1-209ENST00000484305 PTCHD1Q96NR3 888 aa12.13□□□□□ -0.47
HDAC1-209ENST00000484305 EFCAB11Q9BUY7 163 aa12.13□□□□□ -0.47
HDAC1-209ENST00000484305 VPS11Q9H270 941 aa12.13□□□□□ -0.47
HDAC1-209ENST00000484305 CLK4Q9HAZ1 481 aaKnown RBP12.13□□□□□ -0.47
HDAC1-209ENST00000484305 ZNF358Q9NW07 568 aa12.13□□□□□ -0.47
HDAC1-209ENST00000484305 OPTCQ9UBM4 332 aa12.13□□□□□ -0.47
HDAC1-209ENST00000484305 NTNG1Q9Y2I2 539 aa12.13□□□□□ -0.47
HDAC1-209ENST00000484305 SETXQ7Z333 2677 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms