RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 EEF1A1P5Q5VTE0 462 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 ZNF449Q6P9G9 518 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 VWA1Q6PCB0 445 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 BRICD5Q6PL45 260 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 RTL4Q6ZR62 310 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 C17orf107Q6ZR85 190 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 TBC1D21Q8IYX1 336 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 TEX26Q8N6G2 289 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 LINC01356Q8N9X3 169 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 MSANTD4Q8NCY6 345 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 KBTBD8Q8NFY9 601 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 ARRDC2Q8TBH0 407 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 SREK1Q8WXA9 508 aaKnown RBP5.96□□□□□ -1.46
HDAC3-206ENST00000471968 CPA5Q8WXQ8 436 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 GTF3AQ92664 365 aaKnown RBP5.96□□□□□ -1.46
HDAC3-206ENST00000471968 TP53INP1Q96A56 240 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 ZBTB8AQ96BR9 441 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 STARD4Q96DR4 205 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 PGM2Q96G03 612 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 WDYHV1Q96HA8 205 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 DUX5Q96PT3 197 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 CSPG4P5Q96PW8 444 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 SLC30A3Q99726 388 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 GATA5Q9BWX5 397 aaPredicted RBP5.96□□□□□ -1.46
HDAC3-206ENST00000471968 DHX35Q9H5Z1 703 aaKnown RBP5.96□□□□□ -1.46
HDAC3-206ENST00000471968 ARNT2Q9HBZ2 717 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 MAGEE1Q9HCI5 957 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 ACSS1Q9NUB1 689 aaPredicted RBP5.96□□□□□ -1.46
HDAC3-206ENST00000471968 DNAJC11Q9NVH1 559 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 FAIMQ9NVQ4 179 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 AIPL1Q9NZN9 384 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 TTC7AQ9ULT0 858 aaPredicted RBP5.96□□□□□ -1.46
HDAC3-206ENST00000471968 DTX4Q9Y2E6 619 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 SLC6A5Q9Y345 797 aa5.96□□□□□ -1.46
HDAC3-206ENST00000471968 GLYATL1P3A0A0U1RQE8 302 aa5.95□□□□□ -1.46
HDAC3-206ENST00000471968 SAGE2PA6NJ88 616 aa5.95□□□□□ -1.46
HDAC3-206ENST00000471968 A8MUA0 341 aa5.95□□□□□ -1.46
HDAC3-206ENST00000471968 MAGEB17A8MXT2 336 aa5.95□□□□□ -1.46
HDAC3-206ENST00000471968 S1PR4O95977 384 aa5.95□□□□□ -1.46
HDAC3-206ENST00000471968 MYL1P05976 194 aa5.95□□□□□ -1.46
HDAC3-206ENST00000471968 FESP07332 822 aa5.95□□□□□ -1.46
HDAC3-206ENST00000471968 RBP3P10745 1247 aa5.95□□□□□ -1.46
HDAC3-206ENST00000471968 EZRP15311 586 aaKnown RBP5.95□□□□□ -1.46
HDAC3-206ENST00000471968 GPD1P21695 349 aa5.95□□□□□ -1.46
HDAC3-206ENST00000471968 TBXA2RP21731 343 aa5.95□□□□□ -1.46
HDAC3-206ENST00000471968 CES1P23141 567 aa5.95□□□□□ -1.46
HDAC3-206ENST00000471968 GDF1P27539 372 aa5.95□□□□□ -1.46
HDAC3-206ENST00000471968 PKLRP30613 574 aa5.95□□□□□ -1.46
HDAC3-206ENST00000471968 IL2RGP31785 369 aa5.95□□□□□ -1.46
HDAC3-206ENST00000471968 SLC6A12P48065 614 aa5.95□□□□□ -1.46
HDAC3-206ENST00000471968 PRLHRP49683 370 aa5.95□□□□□ -1.46
HDAC3-206ENST00000471968 PDLIM4P50479 330 aa5.95□□□□□ -1.46
HDAC3-206ENST00000471968 CLCN2P51788 898 aa5.95□□□□□ -1.46
HDAC3-206ENST00000471968 GALNT2Q10471 571 aa5.95□□□□□ -1.46
HDAC3-206ENST00000471968 SLC39A14Q15043 492 aa5.95□□□□□ -1.46
HDAC3-206ENST00000471968 NFKBIBQ15653 356 aa5.95□□□□□ -1.46
HDAC3-206ENST00000471968 CARTPTQ16568 116 aa5.95□□□□□ -1.46
HDAC3-206ENST00000471968 PPP6R3Q5H9R7 873 aaPredicted RBP5.95□□□□□ -1.46
HDAC3-206ENST00000471968 CASC10Q5T4H9 136 aa5.95□□□□□ -1.46
HDAC3-206ENST00000471968 SAMD5Q5TGI4 173 aa5.95□□□□□ -1.46
HDAC3-206ENST00000471968 ALG1LQ6GMV1 187 aa5.95□□□□□ -1.46
HDAC3-206ENST00000471968 MEPCEQ7L2J0 689 aaKnown RBP5.95□□□□□ -1.46
HDAC3-206ENST00000471968 ENOSF1Q7L5Y1 443 aa5.95□□□□□ -1.46
HDAC3-206ENST00000471968 PRSS41Q7RTY9 318 aa5.95□□□□□ -1.46
HDAC3-206ENST00000471968 CEP57L1Q8IYX8 460 aa5.95□□□□□ -1.46
HDAC3-206ENST00000471968 LRRC25Q8N386 305 aaPredicted RBP5.95□□□□□ -1.46
HDAC3-206ENST00000471968 PLPP5Q8NEB5 264 aa5.95□□□□□ -1.46
HDAC3-206ENST00000471968 OR5K2Q8NHB8 316 aa5.95□□□□□ -1.46
HDAC3-206ENST00000471968 ZPLD1Q8TCW7 415 aa5.95□□□□□ -1.46
HDAC3-206ENST00000471968 LRRN4Q8WUT4 740 aa5.95□□□□□ -1.46
HDAC3-206ENST00000471968 JSRP1Q96MG2 331 aaPredicted RBP5.95□□□□□ -1.46
HDAC3-206ENST00000471968 IL17FQ96PD4 163 aa5.95□□□□□ -1.46
HDAC3-206ENST00000471968 MIPEPQ99797 713 aa5.95□□□□□ -1.46
HDAC3-206ENST00000471968 TUBA1CQ9BQE3 449 aa5.95□□□□□ -1.46
HDAC3-206ENST00000471968 RSPO3Q9BXY4 272 aaPredicted RBP5.95□□□□□ -1.46
HDAC3-206ENST00000471968 UGT2B28Q9BY64 529 aa5.95□□□□□ -1.46
HDAC3-206ENST00000471968 SYNPO2LQ9H987 977 aa5.95□□□□□ -1.46
HDAC3-206ENST00000471968 ZFP64Q9NPA5 681 aa5.95□□□□□ -1.46
HDAC3-206ENST00000471968 AURKAIP1Q9NWT8 199 aaPredicted RBP5.95□□□□□ -1.46
HDAC3-206ENST00000471968 CISD1Q9NZ45 108 aaKnown RBP5.95□□□□□ -1.46
HDAC3-206ENST00000471968 BOKQ9UMX3 212 aaPredicted RBP5.95□□□□□ -1.46
HDAC3-206ENST00000471968 AP4E1Q9UPM8 1137 aa5.95□□□□□ -1.46
HDAC3-206ENST00000471968 A0A0U1RQJ8 604 aa5.94□□□□□ -1.46
HDAC3-206ENST00000471968 LRRC3CA6NJW4 275 aa5.94□□□□□ -1.46
HDAC3-206ENST00000471968 SLC22A31A6NKX4 558 aa5.94□□□□□ -1.46
HDAC3-206ENST00000471968 H0YIG0 161 aa5.94□□□□□ -1.46
HDAC3-206ENST00000471968 P4HA2O15460 535 aa5.94□□□□□ -1.46
HDAC3-206ENST00000471968 PRKNO60260 465 aaPredicted RBP5.94□□□□□ -1.46
HDAC3-206ENST00000471968 KDM1AO60341 852 aa5.94□□□□□ -1.46
HDAC3-206ENST00000471968 TRAPPC6AO75865 159 aa5.94□□□□□ -1.46
HDAC3-206ENST00000471968 AP2A1O95782 977 aa5.94□□□□□ -1.46
HDAC3-206ENST00000471968 BCL10O95999 233 aa5.94□□□□□ -1.46
HDAC3-206ENST00000471968 PNMA6AP0CW24 399 aaPredicted RBP5.94□□□□□ -1.46
HDAC3-206ENST00000471968 PPP3CBP16298 524 aa5.94□□□□□ -1.46
HDAC3-206ENST00000471968 CD9P21926 228 aa5.94□□□□□ -1.46
HDAC3-206ENST00000471968 APEX1P27695 318 aaKnown RBP5.94□□□□□ -1.46
HDAC3-206ENST00000471968 PSMB5P28074 263 aa5.94□□□□□ -1.46
HDAC3-206ENST00000471968 DVL1P1P54792 670 aaPredicted RBP5.94□□□□□ -1.46
HDAC3-206ENST00000471968 RPA4Q13156 261 aa5.94□□□□□ -1.46
HDAC3-206ENST00000471968 ITGA9Q13797 1035 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms