RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 GOLGA8RI6L899 631 aa12.18□□□□□ -0.46
COL5A1-206ENST00000465877 STX16O14662 325 aa12.18□□□□□ -0.46
COL5A1-206ENST00000465877 ERI3O43414 337 aaKnown RBP12.18□□□□□ -0.46
COL5A1-206ENST00000465877 CDC123O75794 336 aaPredicted RBP12.18□□□□□ -0.46
COL5A1-206ENST00000465877 HPP00738 406 aa12.18□□□□□ -0.46
COL5A1-206ENST00000465877 FHP07954 510 aa12.18□□□□□ -0.46
COL5A1-206ENST00000465877 C8orf89P0DMQ9 161 aa12.18□□□□□ -0.46
COL5A1-206ENST00000465877 SMIM10L1P0DMW3 83 aa12.18□□□□□ -0.46
COL5A1-206ENST00000465877 ITGA3P26006 1051 aa12.18□□□□□ -0.46
COL5A1-206ENST00000465877 EEF1DP29692 281 aaKnown RBP12.18□□□□□ -0.46
COL5A1-206ENST00000465877 HPDP32754 393 aaPredicted RBP12.18□□□□□ -0.46
COL5A1-206ENST00000465877 HSD17B3P37058 310 aa12.18□□□□□ -0.46
COL5A1-206ENST00000465877 CASP2P42575 452 aa12.18□□□□□ -0.46
COL5A1-206ENST00000465877 SLCO1A2P46721 670 aa12.18□□□□□ -0.46
COL5A1-206ENST00000465877 PCDH1Q08174 1060 aa12.18□□□□□ -0.46
COL5A1-206ENST00000465877 AIMP2Q13155 320 aaKnown RBP12.18□□□□□ -0.46
COL5A1-206ENST00000465877 MYBPC3Q14896 1274 aa12.18□□□□□ -0.46
COL5A1-206ENST00000465877 HIST2H2ACQ16777 129 aaPredicted RBP12.18□□□□□ -0.46
COL5A1-206ENST00000465877 ADPRMQ3LIE5 342 aa12.18□□□□□ -0.46
COL5A1-206ENST00000465877 HIST2H2AA3Q6FI13 130 aa12.18□□□□□ -0.46
COL5A1-206ENST00000465877 METTL2BQ6P1Q9 378 aaKnown RBP12.18□□□□□ -0.46
COL5A1-206ENST00000465877 MED27Q6P2C8 311 aa12.18□□□□□ -0.46
COL5A1-206ENST00000465877 TRIM40Q6P9F5 258 aa12.18□□□□□ -0.46
COL5A1-206ENST00000465877 LANCL3Q6ZV70 420 aa12.18□□□□□ -0.46
COL5A1-206ENST00000465877 GOLGA7Q7Z5G4 137 aa12.18□□□□□ -0.46
COL5A1-206ENST00000465877 LCA5Q86VQ0 697 aa12.18□□□□□ -0.46
COL5A1-206ENST00000465877 TDRPQ86YL5 185 aa12.18□□□□□ -0.46
COL5A1-206ENST00000465877 MYLK4Q86YV6 388 aaPredicted RBP12.18□□□□□ -0.46
COL5A1-206ENST00000465877 LAS2Q8IYD9 372 aa12.18□□□□□ -0.46
COL5A1-206ENST00000465877 OR2L5Q8NG80 312 aa12.18□□□□□ -0.46
COL5A1-206ENST00000465877 ACMSDQ8TDX5 336 aa12.18□□□□□ -0.46
COL5A1-206ENST00000465877 EPS8L3Q8TE67 593 aaKnown RBP12.18□□□□□ -0.46
COL5A1-206ENST00000465877 AENQ8WTP8 325 aaKnown RBP12.18□□□□□ -0.46
COL5A1-206ENST00000465877 UBE2E3Q969T4 207 aa12.18□□□□□ -0.46
COL5A1-206ENST00000465877 PHF21BQ96EK2 531 aa12.18□□□□□ -0.46
COL5A1-206ENST00000465877 SMIM10Q96HG1 83 aa12.18□□□□□ -0.46
COL5A1-206ENST00000465877 MS4A8Q9BY19 250 aa12.18□□□□□ -0.46
COL5A1-206ENST00000465877 REXO4Q9GZR2 422 aaKnown RBP12.18□□□□□ -0.46
COL5A1-206ENST00000465877 RHBGQ9H310 441 aa12.18□□□□□ -0.46
COL5A1-206ENST00000465877 ACTR8Q9H981 624 aa12.18□□□□□ -0.46
COL5A1-206ENST00000465877 PPCSQ9HAB8 311 aa12.18□□□□□ -0.46
COL5A1-206ENST00000465877 ZNF160Q9HCG1 818 aa12.18□□□□□ -0.46
COL5A1-206ENST00000465877 LANCL2Q9NS86 450 aa12.18□□□□□ -0.46
COL5A1-206ENST00000465877 PCTPQ9UKL6 214 aa12.18□□□□□ -0.46
COL5A1-206ENST00000465877 ZNF490Q9ULM2 529 aaPredicted RBP12.18□□□□□ -0.46
COL5A1-206ENST00000465877 PRRC2CQ9Y520 2896 aaKnown RBP12.17□□□□□ -0.46
COL5A1-206ENST00000465877 UBR5O95071 2799 aaPredicted RBP12.17□□□□□ -0.46
COL5A1-206ENST00000465877 LOC102723996A0A087X1L8 192 aa12.17□□□□□ -0.46
COL5A1-206ENST00000465877 A0A088AWK7 358 aa12.17□□□□□ -0.46
COL5A1-206ENST00000465877 IGHV1-45A0A0A0MS14 117 aa12.17□□□□□ -0.46
COL5A1-206ENST00000465877 NSG1A0A0A6YYJ2 146 aa12.17□□□□□ -0.46
COL5A1-206ENST00000465877 A8MT66 165 aa12.17□□□□□ -0.46
COL5A1-206ENST00000465877 SLC28A2O43868 658 aa12.17□□□□□ -0.46
COL5A1-206ENST00000465877 UGDHO60701 494 aa12.17□□□□□ -0.46
COL5A1-206ENST00000465877 RPS17P08708 135 aaKnown RBP12.17□□□□□ -0.46
COL5A1-206ENST00000465877 SBK3P0C264 359 aa12.17□□□□□ -0.46
COL5A1-206ENST00000465877 PYGBP11216 843 aa12.17□□□□□ -0.46
COL5A1-206ENST00000465877 PCNAP12004 261 aa12.17□□□□□ -0.46
COL5A1-206ENST00000465877 ZNF10P21506 573 aaPredicted RBP12.17□□□□□ -0.46
COL5A1-206ENST00000465877 CERS1P27544 350 aa12.17□□□□□ -0.46
COL5A1-206ENST00000465877 SERPINB1P30740 379 aa12.17□□□□□ -0.46
COL5A1-206ENST00000465877 VWA5B1Q5TIE3 1220 aa12.17□□□□□ -0.46
COL5A1-206ENST00000465877 WDR93Q6P2C0 686 aa12.17□□□□□ -0.46
COL5A1-206ENST00000465877 EMBQ6PCB8 327 aa12.17□□□□□ -0.46
COL5A1-206ENST00000465877 TMEM205Q6UW68 189 aa12.17□□□□□ -0.46
COL5A1-206ENST00000465877 OR7G3Q8NG95 312 aa12.17□□□□□ -0.46
COL5A1-206ENST00000465877 METTL21AQ8WXB1 218 aa12.17□□□□□ -0.46
COL5A1-206ENST00000465877 TBC1D20Q96BZ9 403 aa12.17□□□□□ -0.46
COL5A1-206ENST00000465877 FAR2Q96K12 515 aa12.17□□□□□ -0.46
COL5A1-206ENST00000465877 SMAD5Q99717 465 aaKnown RBP12.17□□□□□ -0.46
COL5A1-206ENST00000465877 IPPKQ9H8X2 491 aa12.17□□□□□ -0.46
COL5A1-206ENST00000465877 COPS7BQ9H9Q2 264 aaPredicted RBP12.17□□□□□ -0.46
COL5A1-206ENST00000465877 ATP13A2Q9NQ11 1180 aa12.17□□□□□ -0.46
COL5A1-206ENST00000465877 RIC8BQ9NVN3 520 aa12.17□□□□□ -0.46
COL5A1-206ENST00000465877 C19orf25Q9UFG5 118 aaPredicted RBP12.17□□□□□ -0.46
COL5A1-206ENST00000465877 ANAPC2Q9UJX6 822 aa12.17□□□□□ -0.46
COL5A1-206ENST00000465877 ZNF451Q9Y4E5 1061 aa12.17□□□□□ -0.46
COL5A1-206ENST00000465877 PCDHGB7Q9Y5F8 929 aa12.17□□□□□ -0.46
COL5A1-206ENST00000465877 FASNP49327 2511 aaKnown RBP12.17□□□□□ -0.46
COL5A1-206ENST00000465877 RELNP78509 3460 aa12.16□□□□□ -0.46
COL5A1-206ENST00000465877 CHST10O43529 356 aa12.16□□□□□ -0.46
COL5A1-206ENST00000465877 DNAJB6O75190 326 aa12.16□□□□□ -0.46
COL5A1-206ENST00000465877 CDH16O75309 829 aa12.16□□□□□ -0.46
COL5A1-206ENST00000465877 GLRA3O75311 464 aa12.16□□□□□ -0.46
COL5A1-206ENST00000465877 ALPPP05187 535 aa12.16□□□□□ -0.46
COL5A1-206ENST00000465877 RNH1P13489 461 aaKnown RBP12.16□□□□□ -0.46
COL5A1-206ENST00000465877 PLA2G2AP14555 144 aa12.16□□□□□ -0.46
COL5A1-206ENST00000465877 IL10P22301 178 aa12.16□□□□□ -0.46
COL5A1-206ENST00000465877 JAK1P23458 1154 aa12.16□□□□□ -0.46
COL5A1-206ENST00000465877 ARL1P40616 181 aaPredicted RBP12.16□□□□□ -0.46
COL5A1-206ENST00000465877 PLA2G16P53816 162 aa12.16□□□□□ -0.46
COL5A1-206ENST00000465877 SOX8P57073 446 aa12.16□□□□□ -0.46
COL5A1-206ENST00000465877 RHAGQ02094 409 aa12.16□□□□□ -0.46
COL5A1-206ENST00000465877 Q0VFX4 171 aa12.16□□□□□ -0.46
COL5A1-206ENST00000465877 KLRB1Q12918 225 aa12.16□□□□□ -0.46
COL5A1-206ENST00000465877 TRAF3Q13114 568 aa12.16□□□□□ -0.46
COL5A1-206ENST00000465877 DDX39BQ13838 428 aaKnown RBP12.16□□□□□ -0.46
COL5A1-206ENST00000465877 PCOLCEQ15113 449 aa12.16□□□□□ -0.46
COL5A1-206ENST00000465877 IRAK1BP1Q5VVH5 260 aa12.16□□□□□ -0.46
COL5A1-206ENST00000465877 LIPJQ5W064 366 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms