RNA–Protein interactions for RNA: ENST00000360019.7

CLN3-206, Transcript of CLN3, battenin, humanhuman

TSL 2 BASIC

Gene CLN3, Length 1,840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-206ENST00000360019 SCAMP2O15127 329 aaKnown RBP17.72■□□□□ 0.43
CLN3-206ENST00000360019 CFLARO15519 480 aa17.72■□□□□ 0.43
CLN3-206ENST00000360019 PCDHGA12O60330 932 aa17.72■□□□□ 0.43
CLN3-206ENST00000360019 SLC35G6P0C7Q6 338 aa17.72■□□□□ 0.43
CLN3-206ENST00000360019 TAS2R50P59544 299 aa17.72■□□□□ 0.43
CLN3-206ENST00000360019 ARF3P61204 181 aaPredicted RBP17.72■□□□□ 0.43
CLN3-206ENST00000360019 GPLD1P80108 840 aa17.72■□□□□ 0.43
CLN3-206ENST00000360019 RGS1Q08116 209 aa17.72■□□□□ 0.43
CLN3-206ENST00000360019 AMZ1Q400G9 498 aa17.72■□□□□ 0.43
CLN3-206ENST00000360019 PLA2G2CQ5R387 149 aa17.72■□□□□ 0.43
CLN3-206ENST00000360019 CCNYL2Q5T2Q4 361 aa17.72■□□□□ 0.43
CLN3-206ENST00000360019 SPRED1Q7Z699 444 aa17.72■□□□□ 0.43
CLN3-206ENST00000360019 MINDY1Q8N5J2 469 aa17.72■□□□□ 0.43
CLN3-206ENST00000360019 OR7A2PQ8NGA2 310 aa17.72■□□□□ 0.43
CLN3-206ENST00000360019 ROPN1LQ96C74 230 aa17.72■□□□□ 0.43
CLN3-206ENST00000360019 RAB3IPQ96QF0 476 aaPredicted RBP17.72■□□□□ 0.43
CLN3-206ENST00000360019 SLC39A3Q9BRY0 314 aa17.72■□□□□ 0.43
CLN3-206ENST00000360019 EPB41L1Q9H4G0 881 aa17.72■□□□□ 0.43
CLN3-206ENST00000360019 SLAMF8Q9P0V8 285 aa17.72■□□□□ 0.43
CLN3-206ENST00000360019 BTBD3Q9Y2F9 522 aa17.72■□□□□ 0.43
CLN3-206ENST00000360019 PCDHGA7Q9Y5G6 932 aa17.72■□□□□ 0.43
CLN3-206ENST00000360019 A0A088AWK7 358 aa17.71■□□□□ 0.43
CLN3-206ENST00000360019 IGHV5-51A0A0C4DH38 117 aa17.71■□□□□ 0.43
CLN3-206ENST00000360019 TLCD2A6NGC4 264 aa17.71■□□□□ 0.43
CLN3-206ENST00000360019 DUX1O43812 170 aa17.71■□□□□ 0.43
CLN3-206ENST00000360019 TMPRSS11DO60235 418 aa17.71■□□□□ 0.43
CLN3-206ENST00000360019 CD1CP29017 333 aa17.71■□□□□ 0.43
CLN3-206ENST00000360019 CSF2RBP32927 897 aa17.71■□□□□ 0.43
CLN3-206ENST00000360019 SSR2P43308 183 aa17.71■□□□□ 0.43
CLN3-206ENST00000360019 STXBP1P61764 594 aaKnown RBP17.71■□□□□ 0.43
CLN3-206ENST00000360019 DEFB110Q30KQ9 67 aa17.71■□□□□ 0.43
CLN3-206ENST00000360019 FAM71E1Q6IPT2 247 aa17.71■□□□□ 0.43
CLN3-206ENST00000360019 ANKRD26P1Q6NSI1 321 aa17.71■□□□□ 0.43
CLN3-206ENST00000360019 ZDHHC12Q96GR4 267 aa17.71■□□□□ 0.43
CLN3-206ENST00000360019 QRFPRQ96P65 431 aa17.71■□□□□ 0.43
CLN3-206ENST00000360019 KCNC2Q96PR1 638 aa17.71■□□□□ 0.43
CLN3-206ENST00000360019 IL1RL2Q9HB29 575 aa17.71■□□□□ 0.43
CLN3-206ENST00000360019 PRDM7Q9NQW5 492 aa17.71■□□□□ 0.43
CLN3-206ENST00000360019 NDE1Q9NXR1 346 aa17.71■□□□□ 0.43
CLN3-206ENST00000360019 ADAM29Q9UKF5 820 aa17.71■□□□□ 0.43
CLN3-206ENST00000360019 RAB23Q9ULC3 237 aa17.71■□□□□ 0.43
CLN3-206ENST00000360019 A0A0A6YYD5 115 aa17.7■□□□□ 0.42
CLN3-206ENST00000360019 KHNYNO15037 678 aaKnown RBP17.7■□□□□ 0.42
CLN3-206ENST00000360019 B3GALT4O96024 378 aa17.7■□□□□ 0.42
CLN3-206ENST00000360019 IL3P08700 152 aa17.7■□□□□ 0.42
CLN3-206ENST00000360019 PIM1P11309 404 aaPredicted RBP17.7■□□□□ 0.42
CLN3-206ENST00000360019 COX7A2P14406 83 aa17.7■□□□□ 0.42
CLN3-206ENST00000360019 PNLIPP16233 465 aa17.7■□□□□ 0.42
CLN3-206ENST00000360019 ARFIP1P53367 373 aa17.7■□□□□ 0.42
CLN3-206ENST00000360019 MAPK12P53778 367 aa17.7■□□□□ 0.42
CLN3-206ENST00000360019 RAB8AP61006 207 aa17.7■□□□□ 0.42
CLN3-206ENST00000360019 MC1RQ01726 317 aa17.7■□□□□ 0.42
CLN3-206ENST00000360019 PGS1Q32NB8 556 aa17.7■□□□□ 0.42
CLN3-206ENST00000360019 PERM1Q5SV97 790 aa17.7■□□□□ 0.42
CLN3-206ENST00000360019 ULK2Q8IYT8 1036 aa17.7■□□□□ 0.42
CLN3-206ENST00000360019 TMEM132CQ8N3T6 1108 aa17.7■□□□□ 0.42
CLN3-206ENST00000360019 DPP10Q8N608 796 aa17.7■□□□□ 0.42
CLN3-206ENST00000360019 CAMKVQ8NCB2 501 aa17.7■□□□□ 0.42
CLN3-206ENST00000360019 OR6C4Q8NGE1 309 aa17.7■□□□□ 0.42
CLN3-206ENST00000360019 RERGQ96A58 199 aaPredicted RBP17.7■□□□□ 0.42
CLN3-206ENST00000360019 OR52E6Q96RD3 313 aa17.7■□□□□ 0.42
CLN3-206ENST00000360019 CD180Q99467 661 aa17.7■□□□□ 0.42
CLN3-206ENST00000360019 MMADHCQ9H3L0 296 aaPredicted RBP17.7■□□□□ 0.42
CLN3-206ENST00000360019 TMEM9Q9P0T7 183 aa17.7■□□□□ 0.42
CLN3-206ENST00000360019 KLHL3Q9UH77 587 aa17.7■□□□□ 0.42
CLN3-206ENST00000360019 UNC13CQ8NB66 2214 aa17.7■□□□□ 0.42
CLN3-206ENST00000360019 ARHGAP10A1A4S6 786 aa17.7■□□□□ 0.42
CLN3-206ENST00000360019 CPED1A4D0V7 1026 aa17.7■□□□□ 0.42
CLN3-206ENST00000360019 EME2A4GXA9 379 aaPredicted RBP17.7■□□□□ 0.42
CLN3-206ENST00000360019 GABRR3A8MPY1 467 aa17.7■□□□□ 0.42
CLN3-206ENST00000360019 C9P02748 559 aa17.7■□□□□ 0.42
CLN3-206ENST00000360019 CTSBP07858 339 aa17.7■□□□□ 0.42
CLN3-206ENST00000360019 S100A3P33764 101 aa17.7■□□□□ 0.42
CLN3-206ENST00000360019 PSME3P61289 254 aa17.7■□□□□ 0.42
CLN3-206ENST00000360019 NFYCQ13952 458 aa17.7■□□□□ 0.42
CLN3-206ENST00000360019 CAPRIN1Q14444 709 aaKnown RBP17.7■□□□□ 0.42
CLN3-206ENST00000360019 TRMT5Q32P41 509 aaKnown RBP17.7■□□□□ 0.42
CLN3-206ENST00000360019 OR4F3Q6IEY1 312 aa17.7■□□□□ 0.42
CLN3-206ENST00000360019 TRIM40Q6P9F5 258 aa17.7■□□□□ 0.42
CLN3-206ENST00000360019 USP53Q70EK8 1073 aa17.7■□□□□ 0.42
CLN3-206ENST00000360019 DNAJC22Q8N4W6 341 aa17.7■□□□□ 0.42
CLN3-206ENST00000360019 EFCAB3Q8N7B9 438 aa17.7■□□□□ 0.42
CLN3-206ENST00000360019 OR8K5Q8NH50 307 aa17.7■□□□□ 0.42
CLN3-206ENST00000360019 UTP15Q8TED0 518 aaKnown RBP17.7■□□□□ 0.42
CLN3-206ENST00000360019 GTF2H4Q92759 462 aa17.7■□□□□ 0.42
CLN3-206ENST00000360019 GAL3ST3Q96A11 431 aa17.7■□□□□ 0.42
CLN3-206ENST00000360019 TM4SF18Q96CE8 201 aa17.7■□□□□ 0.42
CLN3-206ENST00000360019 LRRC58Q96CX6 371 aa17.7■□□□□ 0.42
CLN3-206ENST00000360019 TCTN2Q96GX1 697 aa17.7■□□□□ 0.42
CLN3-206ENST00000360019 GPATCH1Q9BRR8 931 aaKnown RBP17.7■□□□□ 0.42
CLN3-206ENST00000360019 CROTQ9UKG9 612 aa17.7■□□□□ 0.42
CLN3-206ENST00000360019 MN1Q10571 1320 aaPredicted RBP17.69■□□□□ 0.42
CLN3-206ENST00000360019 LNP1A1A4G5 178 aa17.69■□□□□ 0.42
CLN3-206ENST00000360019 EIF2S1P05198 315 aaKnown RBP17.69■□□□□ 0.42
CLN3-206ENST00000360019 FURINP09958 794 aa17.69■□□□□ 0.42
CLN3-206ENST00000360019 ZNF888P0CJ79 500 aaPredicted RBP17.69■□□□□ 0.42
CLN3-206ENST00000360019 SMIM10L1P0DMW3 83 aa17.69■□□□□ 0.42
CLN3-206ENST00000360019 LAMP1P11279 417 aa17.69■□□□□ 0.42
CLN3-206ENST00000360019 HIST1H1TP22492 207 aaPredicted RBP17.69■□□□□ 0.42
CLN3-206ENST00000360019 ATP5A1P25705 553 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms