RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 PCNAP12004 261 aa16.95■□□□□ 0.3
SNRPA1-201ENST00000254193 COX6A1P12074 109 aa16.95■□□□□ 0.3
SNRPA1-201ENST00000254193 EEF1DP29692 281 aaKnown RBP16.95■□□□□ 0.3
SNRPA1-201ENST00000254193 PLA2G16P53816 162 aa16.95■□□□□ 0.3
SNRPA1-201ENST00000254193 SOX8P57073 446 aa16.95■□□□□ 0.3
SNRPA1-201ENST00000254193 Q0VFX4 171 aa16.95■□□□□ 0.3
SNRPA1-201ENST00000254193 GTF2H2Q13888 395 aa16.95■□□□□ 0.3
SNRPA1-201ENST00000254193 MYBPC3Q14896 1274 aa16.95■□□□□ 0.3
SNRPA1-201ENST00000254193 NIPAL1Q6NVV3 410 aa16.95■□□□□ 0.3
SNRPA1-201ENST00000254193 GTF2H2CQ6P1K8 395 aa16.95■□□□□ 0.3
SNRPA1-201ENST00000254193 MED27Q6P2C8 311 aa16.95■□□□□ 0.3
SNRPA1-201ENST00000254193 TMEM205Q6UW68 189 aa16.95■□□□□ 0.3
SNRPA1-201ENST00000254193 GOLGA7Q7Z5G4 137 aa16.95■□□□□ 0.3
SNRPA1-201ENST00000254193 AMER2Q8N7J2 671 aa16.95■□□□□ 0.3
SNRPA1-201ENST00000254193 MZB1Q8WU39 189 aa16.95■□□□□ 0.3
SNRPA1-201ENST00000254193 METTL21AQ8WXB1 218 aa16.95■□□□□ 0.3
SNRPA1-201ENST00000254193 GAL3ST3Q96A11 431 aa16.95■□□□□ 0.3
SNRPA1-201ENST00000254193 TBC1D20Q96BZ9 403 aa16.95■□□□□ 0.3
SNRPA1-201ENST00000254193 FAR2Q96K12 515 aa16.95■□□□□ 0.3
SNRPA1-201ENST00000254193 F2RL3Q96RI0 385 aa16.95■□□□□ 0.3
SNRPA1-201ENST00000254193 IPPKQ9H8X2 491 aa16.95■□□□□ 0.3
SNRPA1-201ENST00000254193 ACTR8Q9H981 624 aa16.95■□□□□ 0.3
SNRPA1-201ENST00000254193 PRM3Q9NNZ6 103 aa16.95■□□□□ 0.3
SNRPA1-201ENST00000254193 LANCL2Q9NS86 450 aa16.95■□□□□ 0.3
SNRPA1-201ENST00000254193 TMEM216Q9P0N5 145 aa16.95■□□□□ 0.3
SNRPA1-201ENST00000254193 ZNF462Q96JM2 2506 aa16.94■□□□□ 0.3
SNRPA1-201ENST00000254193 NSG1A0A0A6YYJ2 146 aa16.94■□□□□ 0.3
SNRPA1-201ENST00000254193 IGHV3-20A0A0C4DH32 117 aa16.94■□□□□ 0.3
SNRPA1-201ENST00000254193 A0A1W2PPM1 405 aa16.94■□□□□ 0.3
SNRPA1-201ENST00000254193 STX16-NPEPL1H3BU86 382 aa16.94■□□□□ 0.3
SNRPA1-201ENST00000254193 STX16O14662 325 aa16.94■□□□□ 0.3
SNRPA1-201ENST00000254193 B4GALT2O60909 372 aa16.94■□□□□ 0.3
SNRPA1-201ENST00000254193 SH3BGRLO75368 114 aa16.94■□□□□ 0.3
SNRPA1-201ENST00000254193 HPP00738 406 aa16.94■□□□□ 0.3
SNRPA1-201ENST00000254193 FHP07954 510 aa16.94■□□□□ 0.3
SNRPA1-201ENST00000254193 HSD17B3P37058 310 aa16.94■□□□□ 0.3
SNRPA1-201ENST00000254193 ADPRMQ3LIE5 342 aa16.94■□□□□ 0.3
SNRPA1-201ENST00000254193 GRHL2Q6ISB3 625 aa16.94■□□□□ 0.3
SNRPA1-201ENST00000254193 LANCL3Q6ZV70 420 aa16.94■□□□□ 0.3
SNRPA1-201ENST00000254193 NDUFAF7Q7L592 441 aa16.94■□□□□ 0.3
SNRPA1-201ENST00000254193 LAS2Q8IYD9 372 aa16.94■□□□□ 0.3
SNRPA1-201ENST00000254193 TEX19Q8NA77 164 aa16.94■□□□□ 0.3
SNRPA1-201ENST00000254193 OR7G3Q8NG95 312 aa16.94■□□□□ 0.3
SNRPA1-201ENST00000254193 ZNF473Q8WTR7 871 aaKnown RBP16.94■□□□□ 0.3
SNRPA1-201ENST00000254193 UBE2E3Q969T4 207 aa16.94■□□□□ 0.3
SNRPA1-201ENST00000254193 OR1F2PQ96R84 312 aa16.94■□□□□ 0.3
SNRPA1-201ENST00000254193 SMAD5Q99717 465 aaKnown RBP16.94■□□□□ 0.3
SNRPA1-201ENST00000254193 REXO4Q9GZR2 422 aaKnown RBP16.94■□□□□ 0.3
SNRPA1-201ENST00000254193 ZNF552Q9H707 407 aaPredicted RBP16.94■□□□□ 0.3
SNRPA1-201ENST00000254193 TMCO1Q9UM00 188 aa16.94■□□□□ 0.3
SNRPA1-201ENST00000254193 ZNF451Q9Y4E5 1061 aa16.94■□□□□ 0.3
SNRPA1-201ENST00000254193 LOC102723996A0A087X1L8 192 aa16.93■□□□□ 0.3
SNRPA1-201ENST00000254193 IGHV1-45A0A0A0MS14 117 aa16.93■□□□□ 0.3
SNRPA1-201ENST00000254193 A0A1W2PQ72 361 aa16.93■□□□□ 0.3
SNRPA1-201ENST00000254193 FAM227AF5H4B4 570 aa16.93■□□□□ 0.3
SNRPA1-201ENST00000254193 PLA2G2AP14555 144 aa16.93■□□□□ 0.3
SNRPA1-201ENST00000254193 IL10P22301 178 aa16.93■□□□□ 0.3
SNRPA1-201ENST00000254193 PIK3CGP48736 1102 aa16.93■□□□□ 0.3
SNRPA1-201ENST00000254193 RHAGQ02094 409 aa16.93■□□□□ 0.3
SNRPA1-201ENST00000254193 KLRB1Q12918 225 aa16.93■□□□□ 0.3
SNRPA1-201ENST00000254193 DDX39BQ13838 428 aaKnown RBP16.93■□□□□ 0.3
SNRPA1-201ENST00000254193 RUNX2Q13950 521 aa16.93■□□□□ 0.3
SNRPA1-201ENST00000254193 PCOLCEQ15113 449 aa16.93■□□□□ 0.3
SNRPA1-201ENST00000254193 VWA5B1Q5TIE3 1220 aa16.93■□□□□ 0.3
SNRPA1-201ENST00000254193 METTL2BQ6P1Q9 378 aaKnown RBP16.93■□□□□ 0.3
SNRPA1-201ENST00000254193 ABHD17CQ6PCB6 329 aa16.93■□□□□ 0.3
SNRPA1-201ENST00000254193 CYP4X1Q8N118 509 aa16.93■□□□□ 0.3
SNRPA1-201ENST00000254193 RNF175Q8N4F7 328 aa16.93■□□□□ 0.3
SNRPA1-201ENST00000254193 OR2L5Q8NG80 312 aa16.93■□□□□ 0.3
SNRPA1-201ENST00000254193 ACMSDQ8TDX5 336 aa16.93■□□□□ 0.3
SNRPA1-201ENST00000254193 EPS8L3Q8TE67 593 aaKnown RBP16.93■□□□□ 0.3
SNRPA1-201ENST00000254193 TSLPQ969D9 159 aa16.93■□□□□ 0.3
SNRPA1-201ENST00000254193 THOC3Q96J01 351 aaKnown RBP16.93■□□□□ 0.3
SNRPA1-201ENST00000254193 NSUN5Q96P11 429 aaKnown RBP16.93■□□□□ 0.3
SNRPA1-201ENST00000254193 QRFPRQ96P65 431 aa16.93■□□□□ 0.3
SNRPA1-201ENST00000254193 ZNF700Q9H0M5 742 aa16.93■□□□□ 0.3
SNRPA1-201ENST00000254193 NOL11Q9H8H0 719 aaKnown RBP16.93■□□□□ 0.3
SNRPA1-201ENST00000254193 CLK4Q9HAZ1 481 aaKnown RBP16.93■□□□□ 0.3
SNRPA1-201ENST00000254193 ANAPC2Q9UJX6 822 aa16.93■□□□□ 0.3
SNRPA1-201ENST00000254193 PCTPQ9UKL6 214 aa16.93■□□□□ 0.3
SNRPA1-201ENST00000254193 RNF11Q9Y3C5 154 aa16.93■□□□□ 0.3
SNRPA1-201ENST00000254193 COL6A6A6NMZ7 2263 aa16.93■□□□□ 0.3
SNRPA1-201ENST00000254193 MDC1Q14676 2089 aaKnown RBP16.92■□□□□ 0.3
SNRPA1-201ENST00000254193 A8MT66 165 aa16.92■□□□□ 0.3
SNRPA1-201ENST00000254193 OR7A17O14581 309 aa16.92■□□□□ 0.3
SNRPA1-201ENST00000254193 PCDH17O14917 1159 aa16.92■□□□□ 0.3
SNRPA1-201ENST00000254193 TGFB1P01137 390 aa16.92■□□□□ 0.3
SNRPA1-201ENST00000254193 ALPPP05187 535 aa16.92■□□□□ 0.3
SNRPA1-201ENST00000254193 RNH1P13489 461 aaKnown RBP16.92■□□□□ 0.3
SNRPA1-201ENST00000254193 ARL1P40616 181 aaPredicted RBP16.92■□□□□ 0.3
SNRPA1-201ENST00000254193 ABRAXAS2Q15018 415 aa16.92■□□□□ 0.3
SNRPA1-201ENST00000254193 NSDHLQ15738 373 aa16.92■□□□□ 0.3
SNRPA1-201ENST00000254193 ERCC6LQ2NKX8 1250 aa16.92■□□□□ 0.3
SNRPA1-201ENST00000254193 NADK2Q4G0N4 442 aa16.92■□□□□ 0.3
SNRPA1-201ENST00000254193 IRAK1BP1Q5VVH5 260 aa16.92■□□□□ 0.3
SNRPA1-201ENST00000254193 LIPJQ5W064 366 aa16.92■□□□□ 0.3
SNRPA1-201ENST00000254193 TRIM40Q6P9F5 258 aa16.92■□□□□ 0.3
SNRPA1-201ENST00000254193 ATG14Q6ZNE5 492 aa16.92■□□□□ 0.3
SNRPA1-201ENST00000254193 RPS27LQ71UM5 84 aaKnown RBP16.92■□□□□ 0.3
SNRPA1-201ENST00000254193 CPEB2Q7Z5Q1 589 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms