RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 SHANK1Q9Y566 2161 aa15.79■□□□□ 0.12
USB1-211ENST00000565662 A0A087X1B8 175 aa15.79■□□□□ 0.12
USB1-211ENST00000565662 ANKDD1BA6NHY2 528 aa15.79■□□□□ 0.12
USB1-211ENST00000565662 SGK494L7N484 410 aa15.79■□□□□ 0.12
USB1-211ENST00000565662 CLEC3AO75596 197 aa15.79■□□□□ 0.12
USB1-211ENST00000565662 AGFG2O95081 481 aa15.79■□□□□ 0.12
USB1-211ENST00000565662 MLYCDO95822 493 aa15.79■□□□□ 0.12
USB1-211ENST00000565662 CD1DP15813 335 aa15.79■□□□□ 0.12
USB1-211ENST00000565662 GLRBP48167 497 aa15.79■□□□□ 0.12
USB1-211ENST00000565662 FOXL2P58012 376 aa15.79■□□□□ 0.12
USB1-211ENST00000565662 MAT1AQ00266 395 aaKnown RBP15.79■□□□□ 0.12
USB1-211ENST00000565662 ZNF460Q14592 562 aa15.79■□□□□ 0.12
USB1-211ENST00000565662 SLMAPQ14BN4 828 aa15.79■□□□□ 0.12
USB1-211ENST00000565662 ABRAXAS2Q15018 415 aa15.79■□□□□ 0.12
USB1-211ENST00000565662 RBBP5Q15291 538 aaKnown RBP15.79■□□□□ 0.12
USB1-211ENST00000565662 NSDHLQ15738 373 aa15.79■□□□□ 0.12
USB1-211ENST00000565662 PDK4Q16654 411 aa15.79■□□□□ 0.12
USB1-211ENST00000565662 FAM83EQ2M2I3 478 aa15.79■□□□□ 0.12
USB1-211ENST00000565662 KBTBD12Q3ZCT8 623 aa15.79■□□□□ 0.12
USB1-211ENST00000565662 CATSPEREQ5SY80 951 aa15.79■□□□□ 0.12
USB1-211ENST00000565662 METTL2BQ6P1Q9 378 aaKnown RBP15.79■□□□□ 0.12
USB1-211ENST00000565662 KLC3Q6P597 504 aa15.79■□□□□ 0.12
USB1-211ENST00000565662 SLC5A8Q8N695 610 aa15.79■□□□□ 0.12
USB1-211ENST00000565662 HORMAD2Q8N7B1 307 aa15.79■□□□□ 0.12
USB1-211ENST00000565662 PPM1NQ8N819 430 aa15.79■□□□□ 0.12
USB1-211ENST00000565662 BCORP1Q8N888 145 aa15.79■□□□□ 0.12
USB1-211ENST00000565662 ST6GALNAC3Q8NDV1 305 aa15.79■□□□□ 0.12
USB1-211ENST00000565662 RHEBL1Q8TAI7 183 aa15.79■□□□□ 0.12
USB1-211ENST00000565662 BRIX1Q8TDN6 353 aaKnown RBP15.79■□□□□ 0.12
USB1-211ENST00000565662 CNDP1Q96KN2 507 aa15.79■□□□□ 0.12
USB1-211ENST00000565662 IMMP1LQ96LU5 166 aa15.79■□□□□ 0.12
USB1-211ENST00000565662 C16orf45Q96MC5 204 aaPredicted RBP15.79■□□□□ 0.12
USB1-211ENST00000565662 SYNPO2LQ9H987 977 aa15.79■□□□□ 0.12
USB1-211ENST00000565662 LRRC4CQ9HCJ2 640 aa15.79■□□□□ 0.12
USB1-211ENST00000565662 MMP25Q9NPA2 562 aa15.79■□□□□ 0.12
USB1-211ENST00000565662 CD274Q9NZQ7 290 aa15.79■□□□□ 0.12
USB1-211ENST00000565662 ADGRE2Q9UHX3 823 aa15.79■□□□□ 0.12
USB1-211ENST00000565662 MTO1Q9Y2Z2 717 aaKnown RBP15.79■□□□□ 0.12
USB1-211ENST00000565662 MMACHCQ9Y4U1 282 aa15.79■□□□□ 0.12
USB1-211ENST00000565662 BLACEA4D250 179 aa15.78■□□□□ 0.12
USB1-211ENST00000565662 KERAO60938 352 aa15.78■□□□□ 0.12
USB1-211ENST00000565662 URI1O94763 535 aaPredicted RBP15.78■□□□□ 0.12
USB1-211ENST00000565662 ZIC2O95409 532 aaPredicted RBP15.78■□□□□ 0.12
USB1-211ENST00000565662 LTA4HP09960 611 aaKnown RBP15.78■□□□□ 0.12
USB1-211ENST00000565662 EDN3P14138 238 aa15.78■□□□□ 0.12
USB1-211ENST00000565662 ACTN3Q08043 901 aaPredicted RBP15.78■□□□□ 0.12
USB1-211ENST00000565662 Q0VFX4 171 aa15.78■□□□□ 0.12
USB1-211ENST00000565662 TERF2Q15554 542 aa15.78■□□□□ 0.12
USB1-211ENST00000565662 TBCCQ15814 346 aa15.78■□□□□ 0.12
USB1-211ENST00000565662 SYT16Q17RD7 645 aa15.78■□□□□ 0.12
USB1-211ENST00000565662 BTBD16Q32M84 506 aa15.78■□□□□ 0.12
USB1-211ENST00000565662 DEFB134Q4QY38 66 aa15.78■□□□□ 0.12
USB1-211ENST00000565662 COLEC12Q5KU26 742 aa15.78■□□□□ 0.12
USB1-211ENST00000565662 TRIM40Q6P9F5 258 aa15.78■□□□□ 0.12
USB1-211ENST00000565662 ANKRD37Q7Z713 158 aa15.78■□□□□ 0.12
USB1-211ENST00000565662 CUZD1Q86UP6 607 aa15.78■□□□□ 0.12
USB1-211ENST00000565662 UTP15Q8TED0 518 aaKnown RBP15.78■□□□□ 0.12
USB1-211ENST00000565662 ANKRD49Q8WVL7 239 aa15.78■□□□□ 0.12
USB1-211ENST00000565662 WDR34Q96EX3 536 aa15.78■□□□□ 0.12
USB1-211ENST00000565662 SMYD2Q9NRG4 433 aa15.78■□□□□ 0.12
USB1-211ENST00000565662 PTGFRNQ9P2B2 879 aa15.78■□□□□ 0.12
USB1-211ENST00000565662 ESPL1Q14674 2120 aa15.77■□□□□ 0.12
USB1-211ENST00000565662 CLDN4O14493 209 aa15.77■□□□□ 0.12
USB1-211ENST00000565662 CRYABP02511 175 aaKnown RBP15.77■□□□□ 0.12
USB1-211ENST00000565662 ZNF888P0CJ79 500 aaPredicted RBP15.77■□□□□ 0.12
USB1-211ENST00000565662 GNLYP22749 145 aa15.77■□□□□ 0.12
USB1-211ENST00000565662 PIK3CGP48736 1102 aa15.77■□□□□ 0.12
USB1-211ENST00000565662 TNFSF10P50591 281 aa15.77■□□□□ 0.12
USB1-211ENST00000565662 PER3P56645 1201 aa15.77■□□□□ 0.12
USB1-211ENST00000565662 GPX6P59796 221 aa15.77■□□□□ 0.12
USB1-211ENST00000565662 SLBPQ14493 270 aaKnown RBP eCLIP15.77■□□□□ 0.12
USB1-211ENST00000565662 MEP1AQ16819 746 aa15.77■□□□□ 0.12
USB1-211ENST00000565662 ZXDCQ2QGD7 858 aaPredicted RBP15.77■□□□□ 0.12
USB1-211ENST00000565662 FAAH2Q6GMR7 532 aa15.77■□□□□ 0.12
USB1-211ENST00000565662 SLCO4C1Q6ZQN7 724 aa15.77■□□□□ 0.12
USB1-211ENST00000565662 LINC00696Q6ZRV3 163 aa15.77■□□□□ 0.12
USB1-211ENST00000565662 PRSS41Q7RTY9 318 aa15.77■□□□□ 0.12
USB1-211ENST00000565662 PDSS2Q86YH6 399 aa15.77■□□□□ 0.12
USB1-211ENST00000565662 DNAJB8Q8NHS0 232 aa15.77■□□□□ 0.12
USB1-211ENST00000565662 FBF1Q8TES7 1133 aa15.77■□□□□ 0.12
USB1-211ENST00000565662 SSC4DQ8WTU2 575 aa15.77■□□□□ 0.12
USB1-211ENST00000565662 UBTD2Q8WUN7 234 aa15.77■□□□□ 0.12
USB1-211ENST00000565662 PEX11GQ96HA9 241 aa15.77■□□□□ 0.12
USB1-211ENST00000565662 CENPKQ9BS16 269 aa15.77■□□□□ 0.12
USB1-211ENST00000565662 COPS7BQ9H9Q2 264 aaPredicted RBP15.77■□□□□ 0.12
USB1-211ENST00000565662 PRDM9Q9NQV7 894 aa15.77■□□□□ 0.12
USB1-211ENST00000565662 RYDENQ9NUL5 291 aaKnown RBP15.77■□□□□ 0.12
USB1-211ENST00000565662 ASF1BQ9NVP2 202 aa15.77■□□□□ 0.12
USB1-211ENST00000565662 TMCO1Q9UM00 188 aa15.77■□□□□ 0.12
USB1-211ENST00000565662 ACOT9Q9Y305 439 aa15.77■□□□□ 0.12
USB1-211ENST00000565662 IKBKGQ9Y6K9 419 aa15.77■□□□□ 0.12
USB1-211ENST00000565662 SPACA6W5XKT8 324 aa15.77■□□□□ 0.12
USB1-211ENST00000565662 SPENQ96T58 3664 aaKnown RBP15.76■□□□□ 0.11
USB1-211ENST00000565662 CTAGE15A4D2H0 777 aa15.76■□□□□ 0.11
USB1-211ENST00000565662 OR5H15A6NDH6 313 aa15.76■□□□□ 0.11
USB1-211ENST00000565662 ANKUB1A6NFN9 424 aa15.76■□□□□ 0.11
USB1-211ENST00000565662 CXorf49A8MYA2 514 aaPredicted RBP15.76■□□□□ 0.11
USB1-211ENST00000565662 TCP11X1B4DZS4 312 aa15.76■□□□□ 0.11
USB1-211ENST00000565662 PHGDHO43175 533 aaKnown RBP15.76■□□□□ 0.11
USB1-211ENST00000565662 PRMT3O60678 531 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms