RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 NXPE4Q6UWF7 544 aa14.89□□□□□ -0.03
USB1-208ENST00000563207 ADCK2Q7Z695 626 aa14.89□□□□□ -0.03
USB1-208ENST00000563207 OR4N4Q8N0Y3 316 aa14.89□□□□□ -0.03
USB1-208ENST00000563207 C4orf33Q8N1A6 199 aa14.89□□□□□ -0.03
USB1-208ENST00000563207 EFCAB3Q8N7B9 438 aa14.89□□□□□ -0.03
USB1-208ENST00000563207 NEIL2Q969S2 332 aa14.89□□□□□ -0.03
USB1-208ENST00000563207 C1QTNF3Q9BXJ4 246 aa14.89□□□□□ -0.03
USB1-208ENST00000563207 ZNF552Q9H707 407 aaPredicted RBP14.89□□□□□ -0.03
USB1-208ENST00000563207 CUEDC1Q9NWM3 386 aaPredicted RBP14.89□□□□□ -0.03
USB1-208ENST00000563207 MAP10Q9P2G4 905 aa14.89□□□□□ -0.03
USB1-208ENST00000563207 CTSFQ9UBX1 484 aa14.89□□□□□ -0.03
USB1-208ENST00000563207 PLLPQ9Y342 182 aa14.89□□□□□ -0.03
USB1-208ENST00000563207 CSAG2Q9Y5P2 127 aa14.89□□□□□ -0.03
USB1-208ENST00000563207 MAU2Q9Y6X3 613 aa14.89□□□□□ -0.03
USB1-208ENST00000563207 A0A0J9YVX5 310 aa14.88□□□□□ -0.03
USB1-208ENST00000563207 FOXO6A8MYZ6 492 aa14.88□□□□□ -0.03
USB1-208ENST00000563207 PLIN3O60664 434 aa14.88□□□□□ -0.03
USB1-208ENST00000563207 DPM1O60762 260 aa14.88□□□□□ -0.03
USB1-208ENST00000563207 H2AFYO75367 372 aaKnown RBP14.88□□□□□ -0.03
USB1-208ENST00000563207 SBK3P0C264 359 aa14.88□□□□□ -0.03
USB1-208ENST00000563207 C1GALT1C1LP0DN25 315 aa14.88□□□□□ -0.03
USB1-208ENST00000563207 CASP2P42575 452 aa14.88□□□□□ -0.03
USB1-208ENST00000563207 AGTR2P50052 363 aa14.88□□□□□ -0.03
USB1-208ENST00000563207 RRADP55042 308 aa14.88□□□□□ -0.03
USB1-208ENST00000563207 VSX2P58304 361 aaPredicted RBP14.88□□□□□ -0.03
USB1-208ENST00000563207 CSNK1G2P78368 415 aa14.88□□□□□ -0.03
USB1-208ENST00000563207 TBCCQ15814 346 aa14.88□□□□□ -0.03
USB1-208ENST00000563207 NKG7Q16617 165 aa14.88□□□□□ -0.03
USB1-208ENST00000563207 C18orf21Q32NC0 220 aaPredicted RBP14.88□□□□□ -0.03
USB1-208ENST00000563207 ATG9BQ674R7 924 aa14.88□□□□□ -0.03
USB1-208ENST00000563207 GALNT16Q8N428 558 aa14.88□□□□□ -0.03
USB1-208ENST00000563207 PTGR2Q8N8N7 351 aaPredicted RBP14.88□□□□□ -0.03
USB1-208ENST00000563207 GALNT11Q8NCW6 608 aa14.88□□□□□ -0.03
USB1-208ENST00000563207 PHF21BQ96EK2 531 aa14.88□□□□□ -0.03
USB1-208ENST00000563207 SEC16BQ96JE7 1060 aa14.88□□□□□ -0.03
USB1-208ENST00000563207 ZNF285Q96NJ3 590 aa14.88□□□□□ -0.03
USB1-208ENST00000563207 SELENOSQ9BQE4 189 aa14.88□□□□□ -0.03
USB1-208ENST00000563207 AIF1LQ9BQI0 150 aa14.88□□□□□ -0.03
USB1-208ENST00000563207 CENPHQ9H3R5 247 aa14.88□□□□□ -0.03
USB1-208ENST00000563207 SOX17Q9H6I2 414 aaPredicted RBP14.88□□□□□ -0.03
USB1-208ENST00000563207 SLAMF7Q9NQ25 335 aa14.88□□□□□ -0.03
USB1-208ENST00000563207 CUTCQ9NTM9 273 aa14.88□□□□□ -0.03
USB1-208ENST00000563207 SRPK3Q9UPE1 567 aa14.88□□□□□ -0.03
USB1-208ENST00000563207 ANGPTL3Q9Y5C1 460 aa14.88□□□□□ -0.03
USB1-208ENST00000563207 USP9YO00507 2555 aaPredicted RBP14.88□□□□□ -0.03
USB1-208ENST00000563207 DOCK10Q96BY6 2186 aa14.88□□□□□ -0.03
USB1-208ENST00000563207 NAV2Q8IVL1 2488 aa14.87□□□□□ -0.03
USB1-208ENST00000563207 A0A1B0GX78 115 aa14.87□□□□□ -0.03
USB1-208ENST00000563207 TRBC2A0A5B9 178 aa14.87□□□□□ -0.03
USB1-208ENST00000563207 A8MT66 165 aa14.87□□□□□ -0.03
USB1-208ENST00000563207 SOCS6O14544 535 aa14.87□□□□□ -0.03
USB1-208ENST00000563207 FFAR3O14843 346 aa14.87□□□□□ -0.03
USB1-208ENST00000563207 GPR42O15529 346 aa14.87□□□□□ -0.03
USB1-208ENST00000563207 UGDHO60701 494 aa14.87□□□□□ -0.03
USB1-208ENST00000563207 PROCP04070 461 aa14.87□□□□□ -0.03
USB1-208ENST00000563207 MYL2P10916 166 aa14.87□□□□□ -0.03
USB1-208ENST00000563207 GSTM2P28161 218 aa14.87□□□□□ -0.03
USB1-208ENST00000563207 EMP3P54852 163 aa14.87□□□□□ -0.03
USB1-208ENST00000563207 SNRPNP63162 240 aaKnown RBP14.87□□□□□ -0.03
USB1-208ENST00000563207 LAPTM5Q13571 262 aa14.87□□□□□ -0.03
USB1-208ENST00000563207 E2F2Q14209 437 aa14.87□□□□□ -0.03
USB1-208ENST00000563207 WASHC2DQ5SRD0 308 aa14.87□□□□□ -0.03
USB1-208ENST00000563207 SLCO4C1Q6ZQN7 724 aa14.87□□□□□ -0.03
USB1-208ENST00000563207 OVCH1Q7RTY7 1134 aa14.87□□□□□ -0.03
USB1-208ENST00000563207 TMPRSS11BQ86T26 416 aa14.87□□□□□ -0.03
USB1-208ENST00000563207 EXOC3L1Q86VI1 746 aa14.87□□□□□ -0.03
USB1-208ENST00000563207 SHISA5Q8N114 240 aa14.87□□□□□ -0.03
USB1-208ENST00000563207 KRT78Q8N1N4 520 aa14.87□□□□□ -0.03
USB1-208ENST00000563207 CISD2Q8N5K1 135 aaKnown RBP14.87□□□□□ -0.03
USB1-208ENST00000563207 SNX31Q8N9S9 440 aa14.87□□□□□ -0.03
USB1-208ENST00000563207 RERGQ96A58 199 aaPredicted RBP14.87□□□□□ -0.03
USB1-208ENST00000563207 ESAMQ96AP7 390 aa14.87□□□□□ -0.03
USB1-208ENST00000563207 SNRNP40Q96DI7 357 aaKnown RBP14.87□□□□□ -0.03
USB1-208ENST00000563207 WDR34Q96EX3 536 aa14.87□□□□□ -0.03
USB1-208ENST00000563207 PTCD3Q96EY7 689 aaKnown RBP14.87□□□□□ -0.03
USB1-208ENST00000563207 OR2A5Q96R48 311 aa14.87□□□□□ -0.03
USB1-208ENST00000563207 SPSB2Q99619 263 aa14.87□□□□□ -0.03
USB1-208ENST00000563207 EFCAB11Q9BUY7 163 aa14.87□□□□□ -0.03
USB1-208ENST00000563207 NT5DC2Q9H857 520 aa14.87□□□□□ -0.03
USB1-208ENST00000563207 COPG2Q9UBF2 871 aa14.87□□□□□ -0.03
USB1-208ENST00000563207 EMCNQ9ULC0 261 aa14.87□□□□□ -0.03
USB1-208ENST00000563207 SH2B3Q9UQQ2 575 aa14.87□□□□□ -0.03
USB1-208ENST00000563207 PCDHGB7Q9Y5F8 929 aa14.87□□□□□ -0.03
USB1-208ENST00000563207 FITM1A5D6W6 292 aa14.86□□□□□ -0.03
USB1-208ENST00000563207 PEX12O00623 359 aa14.86□□□□□ -0.03
USB1-208ENST00000563207 E2F3O00716 465 aa14.86□□□□□ -0.03
USB1-208ENST00000563207 HAT1O14929 419 aa14.86□□□□□ -0.03
USB1-208ENST00000563207 DSCR3O14972 297 aa14.86□□□□□ -0.03
USB1-208ENST00000563207 DLX3O60479 287 aa14.86□□□□□ -0.03
USB1-208ENST00000563207 EIF2S1P05198 315 aaKnown RBP14.86□□□□□ -0.03
USB1-208ENST00000563207 GP1BBP13224 206 aa14.86□□□□□ -0.03
USB1-208ENST00000563207 IMPDH1P20839 514 aa14.86□□□□□ -0.03
USB1-208ENST00000563207 EEF1DP29692 281 aaKnown RBP14.86□□□□□ -0.03
USB1-208ENST00000563207 AHRP35869 848 aa14.86□□□□□ -0.03
USB1-208ENST00000563207 PRKAA2P54646 552 aa14.86□□□□□ -0.03
USB1-208ENST00000563207 ARSFP54793 590 aa14.86□□□□□ -0.03
USB1-208ENST00000563207 HERVK_113P63132 956 aa14.86□□□□□ -0.03
USB1-208ENST00000563207 GTF2H2Q13888 395 aa14.86□□□□□ -0.03
USB1-208ENST00000563207 GRM7Q14831 915 aa14.86□□□□□ -0.03
USB1-208ENST00000563207 MYBPC3Q14896 1274 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms