RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 ZNF384Q8TF68 577 aa8.73□□□□□ -1.01
GTF2A1-203ENST00000553612 CHFRQ96EP1 664 aa8.73□□□□□ -1.01
GTF2A1-203ENST00000553612 KCNC2Q96PR1 638 aa8.73□□□□□ -1.01
GTF2A1-203ENST00000553612 TEX13DA0A0J9YY54 714 aaPredicted RBP8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 RASAL1O95294 804 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 PTGFRP43088 359 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 TAF1AQ15573 450 aaPredicted RBP8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 GLT8D1Q68CQ7 371 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 LIN54Q6MZP7 749 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 SUSD1Q6UWL2 747 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 QSOX2Q6ZRP7 698 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 DDX53Q86TM3 631 aaKnown RBP8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 PCDH19Q8TAB3 1148 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 NUDT15Q9NV35 164 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 PPP1R14DQ9NXH3 145 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 PTGFRNQ9P2B2 879 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 FBXO5Q9UKT4 447 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 A0A1B0GVM2 712 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 EIF1BO60739 113 aaKnown RBP8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 TFP02787 698 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 HOXD4P09016 255 aaPredicted RBP8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 ODC1P11926 461 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 EFNA1P20827 205 aaPredicted RBP8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 SDHBP21912 280 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 SHMT2P34897 504 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 EIF1P41567 113 aaKnown RBP8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 GDF10P55107 478 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 AMHR2Q16671 573 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 BEX5Q5H9J7 111 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 HACD4Q5VWC8 232 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 H3F3CQ6NXT2 135 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 CDC73Q6P1J9 531 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 OR2A12Q8NGT7 310 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 LRR1Q96L50 414 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 OSBPL2Q9H1P3 480 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 TPT1P8Q9HAU6 139 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 GIMAP2Q9UG22 337 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 C17orf113A0A1B0GUU1 675 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 SLC16A3O15427 465 aaKnown RBP8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 EEF1E1O43324 174 aaKnown RBP8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 UGT2B17O75795 530 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 LRATO95237 230 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 HGFP14210 728 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 SMPD1P17405 629 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 PRDX5P30044 214 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 POLR2IP36954 125 aaKnown RBP8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 RPS5P46782 204 aaKnown RBP8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 RPL7AP62424 266 aaKnown RBP8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 CRHR2Q13324 411 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 PIGHQ14442 188 aaPredicted RBP8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 HKDC1Q2TB90 917 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 WDR88Q6ZMY6 472 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 RNF111Q6ZNA4 994 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 OR8D4Q8NGM9 314 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 PXYLP1Q8TE99 480 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 TMED9Q9BVK6 235 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 STRA6Q9BX79 667 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 KCND2Q9NZV8 630 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 ACOT9Q9Y305 439 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 RBAK-RBAKDNI3L0D1 243 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 ARPC2O15144 300 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 RGS11O94810 467 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 EMX1Q04741 257 aaPredicted RBP8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 IRAK1BP1Q5VVH5 260 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 TOMM5Q8N4H5 51 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 OR6K3Q8NGY3 331 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 NKD2Q969F2 451 aaPredicted RBP8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 KLHL5Q96PQ7 755 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 CCDC3Q9BQI4 270 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 RBAKQ9NYW8 714 aaPredicted RBP8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 VSTM5A8MXK1 200 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 SLCO1B7G3V0H7 640 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 H3BSH0 61 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 ADAM10O14672 748 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 NDUFS3O75489 264 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 CPT2P23786 658 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 MMP12P39900 470 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 NR0B1P51843 470 aaKnown RBP8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 HNRNPKP61978 463 aaKnown RBP eCLIP8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 ACTBL2Q562R1 376 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 ZMAT1Q5H9K5 638 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 ATPAF1Q5TC12 328 aaPredicted RBP8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 TRMT10BQ6PF06 316 aaKnown RBP8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 FIGNL1Q6PIW4 674 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 B3GLCTQ6Y288 498 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 PIGZQ86VD9 579 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 C7orf43Q8WVR3 580 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 PIH1D2Q8WWB5 315 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 DNAJA3Q96EY1 480 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 MS4A3Q96HJ5 214 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 PRKD2Q9BZL6 878 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 RNF167Q9H6Y7 350 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 REEP1Q9H902 201 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 C11orf16Q9NQ32 467 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 SCUBE2Q9NQ36 999 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 IQSEC2Q5JU85 1478 aa8.72□□□□□ -1.01
GTF2A1-203ENST00000553612 MOXD2PA6NHM9 499 aa8.71□□□□□ -1.01
GTF2A1-203ENST00000553612 ACOD1A6NK06 481 aa8.71□□□□□ -1.01
GTF2A1-203ENST00000553612 C5orf58C9J3I9 102 aa8.71□□□□□ -1.01
GTF2A1-203ENST00000553612 KIAA0355O15063 1070 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms