RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 SLCO4A1Q96BD0 722 aa1.55□□□□□ -2.16
CCDC93-209ENST00000488908 ZBED6CLQ96FA7 236 aaPredicted RBP1.55□□□□□ -2.16
CCDC93-209ENST00000488908 SIPA1Q96FS4 1042 aa1.55□□□□□ -2.16
CCDC93-209ENST00000488908 LURAP1Q96LR2 239 aa1.55□□□□□ -2.16
CCDC93-209ENST00000488908 PPM1MQ96MI6 270 aa1.55□□□□□ -2.16
CCDC93-209ENST00000488908 TNFRSF13CQ96RJ3 184 aa1.55□□□□□ -2.16
CCDC93-209ENST00000488908 SLC26A6Q9BXS9 759 aa1.55□□□□□ -2.16
CCDC93-209ENST00000488908 RNF121Q9H920 327 aa1.55□□□□□ -2.16
CCDC93-209ENST00000488908 CDH20Q9HBT6 801 aa1.55□□□□□ -2.16
CCDC93-209ENST00000488908 SLC35C2Q9NQQ7 365 aa1.55□□□□□ -2.16
CCDC93-209ENST00000488908 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP1.55□□□□□ -2.16
CCDC93-209ENST00000488908 CPSF3Q9UKF6 684 aaKnown RBP1.55□□□□□ -2.16
CCDC93-209ENST00000488908 RAB26Q9ULW5 256 aa1.55□□□□□ -2.16
CCDC93-209ENST00000488908 RPS6KL1Q9Y6S9 549 aa1.55□□□□□ -2.16
CCDC93-209ENST00000488908 IL16Q14005 1332 aa1.55□□□□□ -2.16
CCDC93-209ENST00000488908 TEX48A0A1B0GUV7 120 aa1.54□□□□□ -2.16
CCDC93-209ENST00000488908 A0A1W2PPK0 400 aa1.54□□□□□ -2.16
CCDC93-209ENST00000488908 FOXI3A8MTJ6 420 aaPredicted RBP1.54□□□□□ -2.16
CCDC93-209ENST00000488908 ZNF487B1APH4 448 aa1.54□□□□□ -2.16
CCDC93-209ENST00000488908 TCP10L2B9ZVM9 353 aa1.54□□□□□ -2.16
CCDC93-209ENST00000488908 E2F3O00716 465 aa1.54□□□□□ -2.16
CCDC93-209ENST00000488908 TPD52L2O43399 206 aaKnown RBP1.54□□□□□ -2.16
CCDC93-209ENST00000488908 DFNA5O60443 496 aa1.54□□□□□ -2.16
CCDC93-209ENST00000488908 IGLV1-47P01700 117 aa1.54□□□□□ -2.16
CCDC93-209ENST00000488908 PFKFB1P16118 471 aa1.54□□□□□ -2.16
CCDC93-209ENST00000488908 EPCAMP16422 314 aa1.54□□□□□ -2.16
CCDC93-209ENST00000488908 PRKAR2BP31323 418 aa1.54□□□□□ -2.16
CCDC93-209ENST00000488908 RPL9P32969 192 aaKnown RBP1.54□□□□□ -2.16
CCDC93-209ENST00000488908 TNFRSF4P43489 277 aa1.54□□□□□ -2.16
CCDC93-209ENST00000488908 FNTAP49354 379 aa1.54□□□□□ -2.16
CCDC93-209ENST00000488908 ADARP55265 1226 aaKnown RBP1.54□□□□□ -2.16
CCDC93-209ENST00000488908 CLDN15P56746 228 aa1.54□□□□□ -2.16
CCDC93-209ENST00000488908 CCL14Q16627 93 aa1.54□□□□□ -2.16
CCDC93-209ENST00000488908 ECSCRQ19T08 205 aa1.54□□□□□ -2.16
CCDC93-209ENST00000488908 ALFQ53S48 1182 aa1.54□□□□□ -2.16
CCDC93-209ENST00000488908 TEX35Q5T0J7 233 aa1.54□□□□□ -2.16
CCDC93-209ENST00000488908 HAUS3Q68CZ6 603 aa1.54□□□□□ -2.16
CCDC93-209ENST00000488908 MMS22LQ6ZRQ5 1243 aa1.54□□□□□ -2.16
CCDC93-209ENST00000488908 KBTBD6Q86V97 674 aa1.54□□□□□ -2.16
CCDC93-209ENST00000488908 FBXO16Q8IX29 292 aaPredicted RBP1.54□□□□□ -2.16
CCDC93-209ENST00000488908 MKXQ8IYA7 352 aa1.54□□□□□ -2.16
CCDC93-209ENST00000488908 DND1Q8IYX4 353 aaKnown RBP1.54□□□□□ -2.16
CCDC93-209ENST00000488908 TTC39CQ8N584 583 aa1.54□□□□□ -2.16
CCDC93-209ENST00000488908 NXPE2Q96DL1 559 aa1.54□□□□□ -2.16
CCDC93-209ENST00000488908 SGF29Q96ES7 293 aa1.54□□□□□ -2.16
CCDC93-209ENST00000488908 ANKRD27Q96NW4 1050 aa1.54□□□□□ -2.16
CCDC93-209ENST00000488908 ALKBH3Q96Q83 286 aaPredicted RBP1.54□□□□□ -2.16
CCDC93-209ENST00000488908 SLC2A11Q9BYW1 496 aa1.54□□□□□ -2.16
CCDC93-209ENST00000488908 ACTL8Q9H568 366 aa1.54□□□□□ -2.16
CCDC93-209ENST00000488908 C3orf14Q9HBI5 128 aa1.54□□□□□ -2.16
CCDC93-209ENST00000488908 EIF2B3Q9NR50 452 aaKnown RBP1.54□□□□□ -2.16
CCDC93-209ENST00000488908 SUCLA2Q9P2R7 463 aaPredicted RBP1.54□□□□□ -2.16
CCDC93-209ENST00000488908 SLC12A6Q9UHW9 1150 aa1.54□□□□□ -2.16
CCDC93-209ENST00000488908 ZNF175Q9Y473 711 aa1.54□□□□□ -2.16
CCDC93-209ENST00000488908 TRAV24A0A0B4J272 114 aa1.53□□□□□ -2.16
CCDC93-209ENST00000488908 SIGLEC5O15389 551 aa1.53□□□□□ -2.16
CCDC93-209ENST00000488908 LRRTM2O43300 516 aa1.53□□□□□ -2.16
CCDC93-209ENST00000488908 ZNF861PO60384 105 aa1.53□□□□□ -2.16
CCDC93-209ENST00000488908 TBX18O95935 607 aa1.53□□□□□ -2.16
CCDC93-209ENST00000488908 AGR2O95994 175 aa1.53□□□□□ -2.16
CCDC93-209ENST00000488908 YES1P07947 543 aa1.53□□□□□ -2.16
CCDC93-209ENST00000488908 PSMB10P40306 273 aa1.53□□□□□ -2.16
CCDC93-209ENST00000488908 HADHAP40939 763 aa1.53□□□□□ -2.16
CCDC93-209ENST00000488908 PCK2Q16822 640 aa1.53□□□□□ -2.16
CCDC93-209ENST00000488908 C15orf59Q2T9L4 293 aaPredicted RBP1.53□□□□□ -2.16
CCDC93-209ENST00000488908 HSP90AB4PQ58FF6 505 aa1.53□□□□□ -2.16
CCDC93-209ENST00000488908 REP15Q6BDI9 236 aa1.53□□□□□ -2.16
CCDC93-209ENST00000488908 RFWD3Q6PCD5 774 aa1.53□□□□□ -2.16
CCDC93-209ENST00000488908 OR6F1Q8NGZ6 308 aa1.53□□□□□ -2.16
CCDC93-209ENST00000488908 UCMAQ8WVF2 138 aa1.53□□□□□ -2.16
CCDC93-209ENST00000488908 PROX1Q92786 737 aa1.53□□□□□ -2.16
CCDC93-209ENST00000488908 FAM122AQ96E09 287 aa1.53□□□□□ -2.16
CCDC93-209ENST00000488908 HSD17B14Q9BPX1 270 aa1.53□□□□□ -2.16
CCDC93-209ENST00000488908 C9orf78Q9NZ63 289 aaPredicted RBP1.53□□□□□ -2.16
CCDC93-209ENST00000488908 TXNDC16Q9P2K2 825 aa1.53□□□□□ -2.16
CCDC93-209ENST00000488908 RNF150Q9ULK6 438 aa1.53□□□□□ -2.16
CCDC93-209ENST00000488908 MTF2Q9Y483 593 aaPredicted RBP1.53□□□□□ -2.16
CCDC93-209ENST00000488908 CDC42BPBQ9Y5S2 1711 aa1.52□□□□□ -2.17
CCDC93-209ENST00000488908 SPATA31D1Q6ZQQ2 1576 aa1.52□□□□□ -2.17
CCDC93-209ENST00000488908 MEGF6O75095 1541 aa1.52□□□□□ -2.17
CCDC93-209ENST00000488908 TRBV5-4A0A0C4DH59 114 aa1.52□□□□□ -2.17
CCDC93-209ENST00000488908 ZFP92A6NM28 416 aa1.52□□□□□ -2.17
CCDC93-209ENST00000488908 A8MU76 341 aa1.52□□□□□ -2.17
CCDC93-209ENST00000488908 TRIM49D1C9J1S8 452 aa1.52□□□□□ -2.17
CCDC93-209ENST00000488908 PTGES3LE9PB15 166 aa1.52□□□□□ -2.17
CCDC93-209ENST00000488908 F5H0A9 414 aaPredicted RBP1.52□□□□□ -2.17
CCDC93-209ENST00000488908 ADAMDEC1O15204 470 aa1.52□□□□□ -2.17
CCDC93-209ENST00000488908 WISP3O95389 354 aaPredicted RBP1.52□□□□□ -2.17
CCDC93-209ENST00000488908 F3P13726 295 aa1.52□□□□□ -2.17
CCDC93-209ENST00000488908 CPN1P15169 458 aa1.52□□□□□ -2.17
CCDC93-209ENST00000488908 RPS2P15880 293 aaKnown RBP1.52□□□□□ -2.17
CCDC93-209ENST00000488908 MAPK4P31152 587 aa1.52□□□□□ -2.17
CCDC93-209ENST00000488908 MAN1A1P33908 653 aa1.52□□□□□ -2.17
CCDC93-209ENST00000488908 FEN1P39748 380 aaKnown RBP1.52□□□□□ -2.17
CCDC93-209ENST00000488908 SLC25A1P53007 311 aa1.52□□□□□ -2.17
CCDC93-209ENST00000488908 G3BP1Q13283 466 aaKnown RBP eCLIP1.52□□□□□ -2.17
CCDC93-209ENST00000488908 KRT32Q14532 448 aa1.52□□□□□ -2.17
CCDC93-209ENST00000488908 SNAPC1Q16533 368 aa1.52□□□□□ -2.17
CCDC93-209ENST00000488908 CBWD6Q4V339 395 aa1.52□□□□□ -2.17
CCDC93-209ENST00000488908 CBWD3Q5JTY5 395 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms