RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 OR51Q1Q8NH59 317 aa12.21□□□□□ -0.45
COL5A1-206ENST00000465877 UTP15Q8TED0 518 aaKnown RBP12.21□□□□□ -0.45
COL5A1-206ENST00000465877 CREB3L4Q8TEY5 395 aa12.21□□□□□ -0.45
COL5A1-206ENST00000465877 MZB1Q8WU39 189 aa12.21□□□□□ -0.45
COL5A1-206ENST00000465877 CCT6BQ92526 530 aa12.21□□□□□ -0.45
COL5A1-206ENST00000465877 GAL3ST3Q96A11 431 aa12.21□□□□□ -0.45
COL5A1-206ENST00000465877 SEC16BQ96JE7 1060 aa12.21□□□□□ -0.45
COL5A1-206ENST00000465877 MESP1Q9BRJ9 268 aa12.21□□□□□ -0.45
COL5A1-206ENST00000465877 RBCK1Q9BYM8 510 aa12.21□□□□□ -0.45
COL5A1-206ENST00000465877 AICDAQ9GZX7 198 aa12.21□□□□□ -0.45
COL5A1-206ENST00000465877 LRRC14BA6NHZ5 514 aa12.2□□□□□ -0.46
COL5A1-206ENST00000465877 K7EM74 188 aa12.2□□□□□ -0.46
COL5A1-206ENST00000465877 MASP2O00187 686 aa12.2□□□□□ -0.46
COL5A1-206ENST00000465877 JRKO75564 520 aa12.2□□□□□ -0.46
COL5A1-206ENST00000465877 SIX3O95343 332 aaPredicted RBP12.2□□□□□ -0.46
COL5A1-206ENST00000465877 BMP10O95393 424 aa12.2□□□□□ -0.46
COL5A1-206ENST00000465877 B3GALT4O96024 378 aa12.2□□□□□ -0.46
COL5A1-206ENST00000465877 PDGFAP04085 211 aa12.2□□□□□ -0.46
COL5A1-206ENST00000465877 SHBGP04278 402 aa12.2□□□□□ -0.46
COL5A1-206ENST00000465877 HEXBP07686 556 aa12.2□□□□□ -0.46
COL5A1-206ENST00000465877 SERPINA6P08185 405 aa12.2□□□□□ -0.46
COL5A1-206ENST00000465877 RBP1P09455 135 aa12.2□□□□□ -0.46
COL5A1-206ENST00000465877 EPB42P16452 691 aa12.2□□□□□ -0.46
COL5A1-206ENST00000465877 HNRNPH1P31943 449 aaKnown RBP12.2□□□□□ -0.46
COL5A1-206ENST00000465877 HNF4AP41235 474 aa12.2□□□□□ -0.46
COL5A1-206ENST00000465877 CCL11P51671 97 aa12.2□□□□□ -0.46
COL5A1-206ENST00000465877 PGDP52209 483 aa12.2□□□□□ -0.46
COL5A1-206ENST00000465877 RAB8AP61006 207 aa12.2□□□□□ -0.46
COL5A1-206ENST00000465877 STXBP1P61764 594 aaKnown RBP12.2□□□□□ -0.46
COL5A1-206ENST00000465877 OLR1P78380 273 aa12.2□□□□□ -0.46
COL5A1-206ENST00000465877 EEF1A2Q05639 463 aaKnown RBP12.2□□□□□ -0.46
COL5A1-206ENST00000465877 LAPTM5Q13571 262 aa12.2□□□□□ -0.46
COL5A1-206ENST00000465877 TBCCQ15814 346 aa12.2□□□□□ -0.46
COL5A1-206ENST00000465877 MINDY4Q4G0A6 757 aa12.2□□□□□ -0.46
COL5A1-206ENST00000465877 MFSD4BQ5TF39 518 aa12.2□□□□□ -0.46
COL5A1-206ENST00000465877 NIPAL1Q6NVV3 410 aa12.2□□□□□ -0.46
COL5A1-206ENST00000465877 KIRREL2Q6UWL6 708 aa12.2□□□□□ -0.46
COL5A1-206ENST00000465877 VN1R5Q7Z5H4 357 aa12.2□□□□□ -0.46
COL5A1-206ENST00000465877 LAPTM4BQ86VI4 370 aa12.2□□□□□ -0.46
COL5A1-206ENST00000465877 SHISA5Q8N114 240 aa12.2□□□□□ -0.46
COL5A1-206ENST00000465877 GALNT16Q8N428 558 aa12.2□□□□□ -0.46
COL5A1-206ENST00000465877 TEX9Q8N6V9 391 aa12.2□□□□□ -0.46
COL5A1-206ENST00000465877 FDCSPQ8NFU4 85 aa12.2□□□□□ -0.46
COL5A1-206ENST00000465877 OR11G2Q8NGC1 345 aa12.2□□□□□ -0.46
COL5A1-206ENST00000465877 OR5T3Q8NGG3 340 aa12.2□□□□□ -0.46
COL5A1-206ENST00000465877 C8orf44Q96CB5 159 aa12.2□□□□□ -0.46
COL5A1-206ENST00000465877 SCYL1Q96KG9 808 aa12.2□□□□□ -0.46
COL5A1-206ENST00000465877 NUDT9Q9BW91 350 aa12.2□□□□□ -0.46
COL5A1-206ENST00000465877 MRPL46Q9H2W6 279 aaKnown RBP12.2□□□□□ -0.46
COL5A1-206ENST00000465877 NT5DC2Q9H857 520 aa12.2□□□□□ -0.46
COL5A1-206ENST00000465877 GPR83Q9NYM4 423 aa12.2□□□□□ -0.46
COL5A1-206ENST00000465877 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.2□□□□□ -0.46
COL5A1-206ENST00000465877 TBK1Q9UHD2 729 aa12.2□□□□□ -0.46
COL5A1-206ENST00000465877 TMCO1Q9UM00 188 aa12.2□□□□□ -0.46
COL5A1-206ENST00000465877 G3BP2Q9UN86 482 aaKnown RBP12.2□□□□□ -0.46
COL5A1-206ENST00000465877 ANGPTL3Q9Y5C1 460 aa12.2□□□□□ -0.46
COL5A1-206ENST00000465877 V9GYY5 206 aaPredicted RBP12.2□□□□□ -0.46
COL5A1-206ENST00000465877 TENM4Q6N022 2769 aa12.2□□□□□ -0.46
COL5A1-206ENST00000465877 A0A1W2PQ72 361 aa12.19□□□□□ -0.46
COL5A1-206ENST00000465877 ANKDD1BA6NHY2 528 aa12.19□□□□□ -0.46
COL5A1-206ENST00000465877 A6NL46 340 aa12.19□□□□□ -0.46
COL5A1-206ENST00000465877 B8ZZF3 427 aa12.19□□□□□ -0.46
COL5A1-206ENST00000465877 E2F3O00716 465 aa12.19□□□□□ -0.46
COL5A1-206ENST00000465877 PCDH17O14917 1159 aa12.19□□□□□ -0.46
COL5A1-206ENST00000465877 SMIM24O75264 130 aa12.19□□□□□ -0.46
COL5A1-206ENST00000465877 CLEC3AO75596 197 aa12.19□□□□□ -0.46
COL5A1-206ENST00000465877 WFS1O76024 890 aa12.19□□□□□ -0.46
COL5A1-206ENST00000465877 TBX6O95947 436 aaPredicted RBP12.19□□□□□ -0.46
COL5A1-206ENST00000465877 CYC1P08574 325 aa12.19□□□□□ -0.46
COL5A1-206ENST00000465877 COX6A1P12074 109 aa12.19□□□□□ -0.46
COL5A1-206ENST00000465877 PIK3CGP48736 1102 aa12.19□□□□□ -0.46
COL5A1-206ENST00000465877 EMP2P54851 167 aa12.19□□□□□ -0.46
COL5A1-206ENST00000465877 RAPSNQ13702 412 aa12.19□□□□□ -0.46
COL5A1-206ENST00000465877 GTF2H2Q13888 395 aa12.19□□□□□ -0.46
COL5A1-206ENST00000465877 PCBP2Q15366 365 aaKnown RBP eCLIP12.19□□□□□ -0.46
COL5A1-206ENST00000465877 FAAH2Q6GMR7 532 aa12.19□□□□□ -0.46
COL5A1-206ENST00000465877 GRHL2Q6ISB3 625 aa12.19□□□□□ -0.46
COL5A1-206ENST00000465877 GTF2H2CQ6P1K8 395 aa12.19□□□□□ -0.46
COL5A1-206ENST00000465877 TIFABQ6ZNK6 161 aa12.19□□□□□ -0.46
COL5A1-206ENST00000465877 ASB18Q6ZVZ8 466 aa12.19□□□□□ -0.46
COL5A1-206ENST00000465877 PRICKLE2Q7Z3G6 844 aa12.19□□□□□ -0.46
COL5A1-206ENST00000465877 PTRH1Q86Y79 214 aaKnown RBP12.19□□□□□ -0.46
COL5A1-206ENST00000465877 CNPY4Q8N129 248 aa12.19□□□□□ -0.46
COL5A1-206ENST00000465877 MS4A6EQ96DS6 147 aa12.19□□□□□ -0.46
COL5A1-206ENST00000465877 PEX11GQ96HA9 241 aa12.19□□□□□ -0.46
COL5A1-206ENST00000465877 VPS50Q96JG6 964 aa12.19□□□□□ -0.46
COL5A1-206ENST00000465877 OR1F2PQ96R84 312 aa12.19□□□□□ -0.46
COL5A1-206ENST00000465877 MRPL57Q9BQC6 102 aaKnown RBP12.19□□□□□ -0.46
COL5A1-206ENST00000465877 CCDC77Q9BR77 488 aa12.19□□□□□ -0.46
COL5A1-206ENST00000465877 VN1R1Q9GZP7 353 aa12.19□□□□□ -0.46
COL5A1-206ENST00000465877 KLHL31Q9H511 634 aa12.19□□□□□ -0.46
COL5A1-206ENST00000465877 MLXIPLQ9NP71 852 aa12.19□□□□□ -0.46
COL5A1-206ENST00000465877 MKL2Q9ULH7 1088 aa12.19□□□□□ -0.46
COL5A1-206ENST00000465877 TNPO3Q9Y5L0 923 aaKnown RBP12.19□□□□□ -0.46
COL5A1-206ENST00000465877 HEMK1Q9Y5R4 338 aaPredicted RBP12.19□□□□□ -0.46
COL5A1-206ENST00000465877 HELZ2Q9BYK8 2649 aaKnown RBP12.18□□□□□ -0.46
COL5A1-206ENST00000465877 A0A0G2JN53 185 aa12.18□□□□□ -0.46
COL5A1-206ENST00000465877 LRIT2A6NDA9 550 aa12.18□□□□□ -0.46
COL5A1-206ENST00000465877 SMIM23A6NLE4 172 aa12.18□□□□□ -0.46
COL5A1-206ENST00000465877 STX16-NPEPL1H3BU86 382 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms