RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 KRT75O95678 551 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 HIST1H2AGP0C0S8 130 aaPredicted RBP11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 HIST1H2ADP20671 130 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 SOX3P41225 446 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 DEFA1P59665 94 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 DEFA3P59666 94 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 IRF8Q02556 426 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 ABRQ12979 859 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 CDH18Q13634 790 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 BAK1Q16611 211 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 MICAQ29983 383 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 XKR6Q5GH73 641 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 TRAF7Q6Q0C0 670 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 C17orf99Q6UX52 265 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 FBXO22Q8NEZ5 403 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 WDR36Q8NI36 951 aaKnown RBP11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 WDR20Q8TBZ3 569 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 CHAC2Q8WUX2 184 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 TRMT61AQ96FX7 289 aaKnown RBP11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 HIST1H2AHQ96KK5 128 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 CEP19Q96LK0 163 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 SAMD11Q96NU1 681 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 HIST1H2AJQ99878 128 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 TCF25Q9BQ70 676 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 SLC30A2Q9BRI3 323 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 H2AFJQ9BTM1 129 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 KLF16Q9BXK1 252 aaPredicted RBP11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 GPBP1L1Q9HC44 474 aaPredicted RBP11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 EXOSC4Q9NPD3 245 aaKnown RBP11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 ZDHHC3Q9NYG2 299 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 SH3BP4Q9P0V3 963 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 POFUT2Q9Y2G5 429 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 WBP11Q9Y2W2 641 aaKnown RBP11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 APOA1P02647 267 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 CKMT1AP12532 417 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 LHCGRP22888 699 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 CCND3P30281 292 aaPredicted RBP11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 PCGF2P35227 344 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 ETV6P41212 452 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 RFX2P48378 723 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 MVDP53602 400 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 ACSM2AQ08AH3 577 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 PTGES3Q15185 160 aaKnown RBP11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 CCSMST1Q4G0I0 132 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 FAM26DQ5JW98 314 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 CPTPQ5TA50 214 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 ACSM2BQ68CK6 577 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 WDR53Q7Z5U6 358 aaPredicted RBP11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 NPAS3Q8IXF0 933 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 OR4A15Q8NGL6 344 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 OR5AK3PQ8NH89 298 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 NFKBIDQ8NI38 313 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 TRNT1Q96Q11 434 aaKnown RBP11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 MCCC1Q96RQ3 725 aaPredicted RBP11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 FAM129BQ96TA1 746 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 MKLN1Q9UL63 735 aa11.28□□□□□ -0.6
PDZRN3-203ENST00000462146 WWP2O00308 870 aa11.27□□□□□ -0.6
PDZRN3-203ENST00000462146 TFECO14948 347 aaPredicted RBP11.27□□□□□ -0.6
PDZRN3-203ENST00000462146 ADAMDEC1O15204 470 aa11.27□□□□□ -0.6
PDZRN3-203ENST00000462146 ZNF821O75541 412 aaPredicted RBP11.27□□□□□ -0.6
PDZRN3-203ENST00000462146 C1SP09871 688 aa11.27□□□□□ -0.6
PDZRN3-203ENST00000462146 CBSLP0DN79 551 aa11.27□□□□□ -0.6
PDZRN3-203ENST00000462146 OR1D2P34982 312 aa11.27□□□□□ -0.6
PDZRN3-203ENST00000462146 CBSP35520 551 aa11.27□□□□□ -0.6
PDZRN3-203ENST00000462146 SOX6P35712 828 aa11.27□□□□□ -0.6
PDZRN3-203ENST00000462146 RPS19P39019 145 aaKnown RBP11.27□□□□□ -0.6
PDZRN3-203ENST00000462146 FEN1P39748 380 aaKnown RBP11.27□□□□□ -0.6
PDZRN3-203ENST00000462146 PXNP49023 591 aaPredicted RBP11.27□□□□□ -0.6
PDZRN3-203ENST00000462146 SLAMF1Q13291 335 aa11.27□□□□□ -0.6
PDZRN3-203ENST00000462146 TAB1Q15750 504 aa11.27□□□□□ -0.6
PDZRN3-203ENST00000462146 FBXO43Q4G163 708 aa11.27□□□□□ -0.6
PDZRN3-203ENST00000462146 LYPLAL1Q5VWZ2 237 aa11.27□□□□□ -0.6
PDZRN3-203ENST00000462146 TMC5Q6UXY8 1006 aa11.27□□□□□ -0.6
PDZRN3-203ENST00000462146 LAX1Q8IWV1 398 aa11.27□□□□□ -0.6
PDZRN3-203ENST00000462146 VOPP1Q96AW1 172 aa11.27□□□□□ -0.6
PDZRN3-203ENST00000462146 ST6GAL2Q96JF0 529 aa11.27□□□□□ -0.6
PDZRN3-203ENST00000462146 TTYH2Q9BSA4 534 aa11.27□□□□□ -0.6
PDZRN3-203ENST00000462146 RETREG1Q9H6L5 497 aa11.27□□□□□ -0.6
PDZRN3-203ENST00000462146 SMURF1Q9HCE7 757 aa11.27□□□□□ -0.6
PDZRN3-203ENST00000462146 TRIM39Q9HCM9 518 aa11.27□□□□□ -0.6
PDZRN3-203ENST00000462146 TBC1D14Q9P2M4 693 aa11.27□□□□□ -0.6
PDZRN3-203ENST00000462146 EXO1Q9UQ84 846 aaKnown RBP11.27□□□□□ -0.6
PDZRN3-203ENST00000462146 KLK4Q9Y5K2 254 aa11.27□□□□□ -0.6
PDZRN3-203ENST00000462146 TMEM202A6NGA9 273 aa11.27□□□□□ -0.61
PDZRN3-203ENST00000462146 AGAP14A8MT82 685 aa11.27□□□□□ -0.61
PDZRN3-203ENST00000462146 NPIPB8E9PQR5 432 aa11.27□□□□□ -0.61
PDZRN3-203ENST00000462146 CA12O43570 354 aa11.27□□□□□ -0.61
PDZRN3-203ENST00000462146 DPM1O60762 260 aa11.27□□□□□ -0.61
PDZRN3-203ENST00000462146 IGFBP1P08833 259 aaPredicted RBP11.27□□□□□ -0.61
PDZRN3-203ENST00000462146 IDSP22304 550 aa11.27□□□□□ -0.61
PDZRN3-203ENST00000462146 POU1F1P28069 291 aa11.27□□□□□ -0.61
PDZRN3-203ENST00000462146 STK19P49842 368 aaPredicted RBP11.27□□□□□ -0.61
PDZRN3-203ENST00000462146 CCL23P55773 120 aa11.27□□□□□ -0.61
PDZRN3-203ENST00000462146 PTSQ03393 145 aa11.27□□□□□ -0.61
PDZRN3-203ENST00000462146 CSTF3Q12996 717 aaKnown RBP11.27□□□□□ -0.61
PDZRN3-203ENST00000462146 GPR50Q13585 617 aa11.27□□□□□ -0.61
PDZRN3-203ENST00000462146 DOC2AQ14183 400 aa11.27□□□□□ -0.61
PDZRN3-203ENST00000462146 LEXMQ3ZCV2 418 aa11.27□□□□□ -0.61
PDZRN3-203ENST00000462146 GPR33Q49SQ1 333 aa11.27□□□□□ -0.61
PDZRN3-203ENST00000462146 DGKKQ5KSL6 1271 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms