RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 RSL24D1Q9UHA3 163 aaKnown RBP4.24□□□□□ -1.73
HMGB1P16-201ENST00000447155 STX8Q9UNK0 236 aa4.24□□□□□ -1.73
HMGB1P16-201ENST00000447155 PRELID1Q9Y255 219 aa4.24□□□□□ -1.73
HMGB1P16-201ENST00000447155 FER1L6Q2WGJ9 1857 aa4.24□□□□□ -1.73
HMGB1P16-201ENST00000447155 ASTN2O75129 1339 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 ADAMTS13Q76LX8 1427 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 TRBC2A0A5B9 178 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 TRIM49BA6NDI0 452 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 H7C0S8 307 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 ZNF701M0R085 212 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 ZNF263O14978 683 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 GPAA1O43292 621 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 PRAMEF11O60813 436 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 ENTPD5O75356 428 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 CREG1O75629 220 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 PSMD10O75832 226 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 IDH1O75874 414 aaKnown RBP4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 STAM2O75886 525 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 KRT36O76013 467 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 CIAO1O76071 339 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 BCL10O95999 233 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 SHBGP04278 402 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 ALPLP05186 524 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 APOA4P06727 396 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 NGFRP08138 427 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 ABHD2P08910 425 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 ZCCHC18P0CG32 403 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 HSPA8P11142 646 aaKnown RBP4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 DAOP14920 347 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 UQCRBP14927 111 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 ETS2P15036 469 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 CDH3P22223 829 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 NT5C2P49902 561 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 RAP1GDS1P52306 607 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 PPP5CP53041 499 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 HAND2P61296 217 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 SNRPEP62304 92 aaKnown RBP4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 PPIDQ08752 370 aaKnown RBP4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 ALCAMQ13740 583 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 HNRNPDQ14103 355 aaKnown RBP4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 GIT2Q14161 759 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 TNIP1Q15025 636 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 SNAPC1Q16533 368 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 PDK4Q16654 411 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 TNFAIP8L3Q5GJ75 292 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 C1orf146Q5VVC0 180 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 IL23RQ5VWK5 629 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 FAM91A1Q658Y4 838 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 FAM109BQ6ICB4 259 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 KRT80Q6KB66 452 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 DHRS4L2Q6PKH6 230 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 ZNF704Q6ZNC4 412 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 DENND5BQ6ZUT9 1274 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 CREB3L2Q70SY1 520 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 GET4Q7L5D6 327 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 CHST3Q7LGC8 479 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 PLPPR4Q7Z2D5 763 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 TMEM126BQ8IUX1 230 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 ERI1Q8IV48 349 aaKnown RBP4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 RBMXL3Q8N7X1 1067 aaKnown RBP4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 FAM133AQ8N9E0 248 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 RAB3IL1Q8TBN0 382 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 ACMSDQ8TDX5 336 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 STARD8Q92502 1023 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 ESR2Q92731 530 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 NEUROG1Q92886 237 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 ZNF479Q96JC4 524 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 RAB34Q9BZG1 259 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 FAM96AQ9H5X1 160 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 LY9Q9HBG7 655 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 GIN1Q9NXP7 522 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 TMOD2Q9NZR1 351 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 GNPTGQ9UJJ9 305 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 TFR2Q9UP52 801 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 VDAC3Q9Y277 283 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 ITM2BQ9Y287 266 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 PCDHAC2Q9Y5I4 1007 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 IKBKGQ9Y6K9 419 aa4.23□□□□□ -1.73
HMGB1P16-201ENST00000447155 NAV1Q8NEY1 1877 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 PAPPAQ13219 1627 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 GSTTP1A0A1W2PQM5 241 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 SYCE1LA8MT33 242 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 A8MXE2 369 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 GOLGA8MH3BSY2 632 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 BOLA2-SMG1P6H3BVE0 249 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 I3L4J1 428 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 TM9SF1O15321 606 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 MAGEB2O15479 319 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 BUD23O43709 281 aaKnown RBP4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 EDF1O60869 148 aaKnown RBP4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 TBX10O75333 385 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 TRMUO75648 421 aaKnown RBP4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 FGGP02679 453 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 PLEKP08567 350 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 H2AFZP0C0S5 128 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 GSTT2P0CG29 244 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 GSTT2BP0CG30 244 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 PCP11498 1178 aaKnown RBP4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 ANPEPP15144 967 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms