RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 SH3BP4Q9P0V3 963 aa21.09■□□□□ 0.97
VSX1-205ENST00000429762 PCDHB14Q9Y5E9 798 aa21.09■□□□□ 0.97
VSX1-205ENST00000429762 PCDHGA4Q9Y5G9 962 aa21.09■□□□□ 0.97
VSX1-205ENST00000429762 AQP9O43315 295 aa21.08■□□□□ 0.97
VSX1-205ENST00000429762 CLEC3AO75596 197 aa21.08■□□□□ 0.97
VSX1-205ENST00000429762 CPSF4O95639 269 aaKnown RBP21.08■□□□□ 0.97
VSX1-205ENST00000429762 TDGF1P13385 188 aa21.08■□□□□ 0.97
VSX1-205ENST00000429762 SERPINB1P30740 379 aa21.08■□□□□ 0.97
VSX1-205ENST00000429762 CSTF1Q05048 431 aaKnown RBP21.08■□□□□ 0.97
VSX1-205ENST00000429762 HYAL2Q12891 473 aa21.08■□□□□ 0.97
VSX1-205ENST00000429762 ZIC1Q15915 447 aa21.08■□□□□ 0.97
VSX1-205ENST00000429762 TJAP1Q5JTD0 557 aa21.08■□□□□ 0.97
VSX1-205ENST00000429762 TOR1AIP1Q5JTV8 583 aa21.08■□□□□ 0.97
VSX1-205ENST00000429762 CPTPQ5TA50 214 aa21.08■□□□□ 0.97
VSX1-205ENST00000429762 FCRL6Q6DN72 434 aa21.08■□□□□ 0.97
VSX1-205ENST00000429762 TMEM132CQ8N3T6 1108 aa21.08■□□□□ 0.97
VSX1-205ENST00000429762 MFSD9Q8NBP5 474 aa21.08■□□□□ 0.97
VSX1-205ENST00000429762 PUM2Q8TB72 1066 aaKnown RBP eCLIP21.08■□□□□ 0.97
VSX1-205ENST00000429762 SLC22A18Q96BI1 424 aa21.08■□□□□ 0.97
VSX1-205ENST00000429762 ITCHQ96J02 903 aa21.08■□□□□ 0.97
VSX1-205ENST00000429762 C17orf62Q9BQA9 187 aa21.08■□□□□ 0.97
VSX1-205ENST00000429762 DUSP26Q9BV47 211 aa21.08■□□□□ 0.97
VSX1-205ENST00000429762 TWSG1Q9GZX9 223 aa21.08■□□□□ 0.97
VSX1-205ENST00000429762 RMND5AQ9H871 391 aa21.08■□□□□ 0.97
VSX1-205ENST00000429762 PRMT8Q9NR22 394 aaPredicted RBP21.08■□□□□ 0.97
VSX1-205ENST00000429762 LRIT2A6NDA9 550 aa21.08■□□□□ 0.96
VSX1-205ENST00000429762 SEMA3DO95025 777 aa21.08■□□□□ 0.96
VSX1-205ENST00000429762 BAG2O95816 211 aa21.08■□□□□ 0.96
VSX1-205ENST00000429762 NPPAP01160 153 aa21.08■□□□□ 0.96
VSX1-205ENST00000429762 ATP6V1B2P21281 511 aa21.08■□□□□ 0.96
VSX1-205ENST00000429762 AFF3P51826 1226 aaKnown RBP21.08■□□□□ 0.96
VSX1-205ENST00000429762 C21orf58P58505 322 aa21.08■□□□□ 0.96
VSX1-205ENST00000429762 SRSF11Q05519 484 aaKnown RBP21.08■□□□□ 0.96
VSX1-205ENST00000429762 FAM71E1Q6IPT2 247 aa21.08■□□□□ 0.96
VSX1-205ENST00000429762 SPATA24Q86W54 205 aa21.08■□□□□ 0.96
VSX1-205ENST00000429762 ARL14Q8N4G2 192 aa21.08■□□□□ 0.96
VSX1-205ENST00000429762 ZFPM2Q8WW38 1151 aa21.08■□□□□ 0.96
VSX1-205ENST00000429762 JADE3Q92613 823 aa21.08■□□□□ 0.96
VSX1-205ENST00000429762 ANKRD27Q96NW4 1050 aa21.08■□□□□ 0.96
VSX1-205ENST00000429762 TEFMQ96QE5 360 aaKnown RBP21.08■□□□□ 0.96
VSX1-205ENST00000429762 KCNH6Q9H252 994 aa21.08■□□□□ 0.96
VSX1-205ENST00000429762 ALG2Q9H553 416 aa21.08■□□□□ 0.96
VSX1-205ENST00000429762 MYNNQ9NPC7 610 aa21.08■□□□□ 0.96
VSX1-205ENST00000429762 AHSPQ9NZD4 102 aa21.08■□□□□ 0.96
VSX1-205ENST00000429762 AP1M2Q9Y6Q5 423 aa21.08■□□□□ 0.96
VSX1-205ENST00000429762 LAMA1P25391 3075 aa21.08■□□□□ 0.96
VSX1-205ENST00000429762 LAMTOR5O43504 91 aa21.07■□□□□ 0.96
VSX1-205ENST00000429762 CTSVO60911 334 aa21.07■□□□□ 0.96
VSX1-205ENST00000429762 SCN2BO60939 215 aa21.07■□□□□ 0.96
VSX1-205ENST00000429762 NCK1P16333 377 aa21.07■□□□□ 0.96
VSX1-205ENST00000429762 FAM180BQ6P0A1 224 aa21.07■□□□□ 0.96
VSX1-205ENST00000429762 SPESP1Q6UW49 350 aa21.07■□□□□ 0.96
VSX1-205ENST00000429762 MAML2Q8IZL2 1156 aaPredicted RBP21.07■□□□□ 0.96
VSX1-205ENST00000429762 TMEM131Q92545 1883 aa21.07■□□□□ 0.96
VSX1-205ENST00000429762 RGMAQ96B86 450 aa21.07■□□□□ 0.96
VSX1-205ENST00000429762 KCTD14Q9BQ13 255 aaPredicted RBP21.07■□□□□ 0.96
VSX1-205ENST00000429762 REEP4Q9H6H4 257 aa21.07■□□□□ 0.96
VSX1-205ENST00000429762 TMEM74BQ9NUR3 256 aa21.07■□□□□ 0.96
VSX1-205ENST00000429762 ERVK-11Q9UQG0 969 aa21.07■□□□□ 0.96
VSX1-205ENST00000429762 MAN2B2Q9Y2E5 1009 aa21.07■□□□□ 0.96
VSX1-205ENST00000429762 A0A096LPI6 279 aa21.06■□□□□ 0.96
VSX1-205ENST00000429762 A0A0J9YVX5 310 aa21.06■□□□□ 0.96
VSX1-205ENST00000429762 C2orf74A8MZ97 194 aa21.06■□□□□ 0.96
VSX1-205ENST00000429762 RFXANKO14593 260 aa21.06■□□□□ 0.96
VSX1-205ENST00000429762 TMPRSS11DO60235 418 aa21.06■□□□□ 0.96
VSX1-205ENST00000429762 NOBOXO60393 691 aa21.06■□□□□ 0.96
VSX1-205ENST00000429762 HSD17B1P14061 328 aa21.06■□□□□ 0.96
VSX1-205ENST00000429762 MAPK12P53778 367 aa21.06■□□□□ 0.96
VSX1-205ENST00000429762 OR4D2P58180 307 aa21.06■□□□□ 0.96
VSX1-205ENST00000429762 HNRNPKP61978 463 aaKnown RBP eCLIP21.06■□□□□ 0.96
VSX1-205ENST00000429762 SNRPNP63162 240 aaKnown RBP21.06■□□□□ 0.96
VSX1-205ENST00000429762 LYSMD4Q5XG99 296 aa21.06■□□□□ 0.96
VSX1-205ENST00000429762 FBXO42Q6P3S6 717 aa21.06■□□□□ 0.96
VSX1-205ENST00000429762 FIGLAQ6QHK4 219 aa21.06■□□□□ 0.96
VSX1-205ENST00000429762 MAMSTRQ6ZN01 415 aa21.06■□□□□ 0.96
VSX1-205ENST00000429762 ZNF793Q6ZN11 406 aa21.06■□□□□ 0.96
VSX1-205ENST00000429762 TTLQ8NG68 377 aa21.06■□□□□ 0.96
VSX1-205ENST00000429762 CIDECQ96AQ7 238 aaPredicted RBP21.06■□□□□ 0.96
VSX1-205ENST00000429762 ABCG4Q9H172 646 aa21.06■□□□□ 0.96
VSX1-205ENST00000429762 SNX11Q9Y5W9 270 aa21.06■□□□□ 0.96
VSX1-205ENST00000429762 TRBV5-3A0A0A0MS03 114 aa21.06■□□□□ 0.96
VSX1-205ENST00000429762 SH3BP5O60239 455 aa21.06■□□□□ 0.96
VSX1-205ENST00000429762 ANP32DO95626 131 aa21.06■□□□□ 0.96
VSX1-205ENST00000429762 FURINP09958 794 aa21.06■□□□□ 0.96
VSX1-205ENST00000429762 ANPEPP15144 967 aa21.06■□□□□ 0.96
VSX1-205ENST00000429762 PTPN6P29350 595 aa21.06■□□□□ 0.96
VSX1-205ENST00000429762 DUOXA1Q1HG43 343 aa21.06■□□□□ 0.96
VSX1-205ENST00000429762 DPY19L1Q2PZI1 675 aa21.06■□□□□ 0.96
VSX1-205ENST00000429762 RUNDC3AQ59EK9 446 aa21.06■□□□□ 0.96
VSX1-205ENST00000429762 RNF111Q6ZNA4 994 aa21.06■□□□□ 0.96
VSX1-205ENST00000429762 VN1R4Q7Z5H5 301 aa21.06■□□□□ 0.96
VSX1-205ENST00000429762 WDR5BQ86VZ2 330 aa21.06■□□□□ 0.96
VSX1-205ENST00000429762 TBC1D19Q8N5T2 526 aa21.06■□□□□ 0.96
VSX1-205ENST00000429762 OR8J2Q8NGG1 315 aa21.06■□□□□ 0.96
VSX1-205ENST00000429762 MS4A6EQ96DS6 147 aa21.06■□□□□ 0.96
VSX1-205ENST00000429762 THUMPD3Q9BV44 507 aaKnown RBP21.06■□□□□ 0.96
VSX1-205ENST00000429762 FSCN3Q9NQT6 498 aa21.06■□□□□ 0.96
VSX1-205ENST00000429762 ATP6V1HQ9UI12 483 aa21.06■□□□□ 0.96
VSX1-205ENST00000429762 C15orf38-AP3S2A0A0A6YYH1 394 aa21.05■□□□□ 0.96
VSX1-205ENST00000429762 OR2A25A4D2G3 310 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms