RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 PITHD1Q9GZP4 211 aaPredicted RBP16.71■□□□□ 0.27
HDDC3-201ENST00000330334 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.71■□□□□ 0.27
HDDC3-201ENST00000330334 SPNS1Q9H2V7 528 aa16.71■□□□□ 0.27
HDDC3-201ENST00000330334 SMYD2Q9NRG4 433 aa16.71■□□□□ 0.27
HDDC3-201ENST00000330334 COPG2Q9UBF2 871 aa16.71■□□□□ 0.27
HDDC3-201ENST00000330334 PCDHGB6Q9Y5F9 930 aa16.71■□□□□ 0.27
HDDC3-201ENST00000330334 IGHV3-20A0A0C4DH32 117 aa16.7■□□□□ 0.26
HDDC3-201ENST00000330334 NPEPPSL1A6NEC2 478 aa16.7■□□□□ 0.26
HDDC3-201ENST00000330334 OR2W5A6NFC9 320 aa16.7■□□□□ 0.26
HDDC3-201ENST00000330334 CHST10O43529 356 aa16.7■□□□□ 0.26
HDDC3-201ENST00000330334 UQCRHP07919 91 aa16.7■□□□□ 0.26
HDDC3-201ENST00000330334 GNAZP19086 355 aa16.7■□□□□ 0.26
HDDC3-201ENST00000330334 GSTM2P28161 218 aa16.7■□□□□ 0.26
HDDC3-201ENST00000330334 GGT5P36269 586 aa16.7■□□□□ 0.26
HDDC3-201ENST00000330334 SLC6A12P48065 614 aa16.7■□□□□ 0.26
HDDC3-201ENST00000330334 SLC12A2P55011 1212 aa16.7■□□□□ 0.26
HDDC3-201ENST00000330334 HYAL2Q12891 473 aa16.7■□□□□ 0.26
HDDC3-201ENST00000330334 ZNF460Q14592 562 aa16.7■□□□□ 0.26
HDDC3-201ENST00000330334 TSNQ15631 228 aaKnown RBP16.7■□□□□ 0.26
HDDC3-201ENST00000330334 ACER2Q5QJU3 275 aa16.7■□□□□ 0.26
HDDC3-201ENST00000330334 TCAIMQ8N3R3 496 aa16.7■□□□□ 0.26
HDDC3-201ENST00000330334 TTLQ8NG68 377 aa16.7■□□□□ 0.26
HDDC3-201ENST00000330334 OR5T3Q8NGG3 340 aa16.7■□□□□ 0.26
HDDC3-201ENST00000330334 SUN3Q8TAQ9 357 aa16.7■□□□□ 0.26
HDDC3-201ENST00000330334 TAAR6Q96RI8 345 aa16.7■□□□□ 0.26
HDDC3-201ENST00000330334 LPAR4Q99677 370 aa16.7■□□□□ 0.26
HDDC3-201ENST00000330334 EGFL8Q99944 293 aa16.7■□□□□ 0.26
HDDC3-201ENST00000330334 GRHL1Q9NZI5 618 aa16.7■□□□□ 0.26
HDDC3-201ENST00000330334 TXNDC16Q9P2K2 825 aa16.7■□□□□ 0.26
HDDC3-201ENST00000330334 MTO1Q9Y2Z2 717 aaKnown RBP16.7■□□□□ 0.26
HDDC3-201ENST00000330334 CENPEQ02224 2701 aa16.69■□□□□ 0.26
HDDC3-201ENST00000330334 TEX15Q9BXT5 2789 aa16.69■□□□□ 0.26
HDDC3-201ENST00000330334 TCRBV9S1A1TA0A576 114 aa16.69■□□□□ 0.26
HDDC3-201ENST00000330334 ZNF860A6NHJ4 632 aa16.69■□□□□ 0.26
HDDC3-201ENST00000330334 RAD51CO43502 376 aa16.69■□□□□ 0.26
HDDC3-201ENST00000330334 PRAMEF2O60811 474 aa16.69■□□□□ 0.26
HDDC3-201ENST00000330334 H2AFYO75367 372 aaKnown RBP16.69■□□□□ 0.26
HDDC3-201ENST00000330334 CRYABP02511 175 aaKnown RBP16.69■□□□□ 0.26
HDDC3-201ENST00000330334 SERPIND1P05546 499 aa16.69■□□□□ 0.26
HDDC3-201ENST00000330334 STSP08842 583 aa16.69■□□□□ 0.26
HDDC3-201ENST00000330334 ZNF888P0CJ79 500 aaPredicted RBP16.69■□□□□ 0.26
HDDC3-201ENST00000330334 C1GALT1C1LP0DN25 315 aa16.69■□□□□ 0.26
HDDC3-201ENST00000330334 SSTR1P30872 391 aa16.69■□□□□ 0.26
HDDC3-201ENST00000330334 CAV1Q03135 178 aa16.69■□□□□ 0.26
HDDC3-201ENST00000330334 ZNF33BQ06732 778 aa16.69■□□□□ 0.26
HDDC3-201ENST00000330334 ACTN3Q08043 901 aaPredicted RBP16.69■□□□□ 0.26
HDDC3-201ENST00000330334 TGFBIQ15582 683 aa16.69■□□□□ 0.26
HDDC3-201ENST00000330334 SFT2D3Q587I9 215 aa16.69■□□□□ 0.26
HDDC3-201ENST00000330334 PAPD4Q6PIY7 484 aaKnown RBP16.69■□□□□ 0.26
HDDC3-201ENST00000330334 SLCO4C1Q6ZQN7 724 aa16.69■□□□□ 0.26
HDDC3-201ENST00000330334 QSOX2Q6ZRP7 698 aa16.69■□□□□ 0.26
HDDC3-201ENST00000330334 C3orf62Q6ZUJ4 267 aa16.69■□□□□ 0.26
HDDC3-201ENST00000330334 FRA10AC1Q70Z53 315 aa16.69■□□□□ 0.26
HDDC3-201ENST00000330334 MAMDC2Q7Z304 686 aaPredicted RBP16.69■□□□□ 0.26
HDDC3-201ENST00000330334 TMPRSS11BQ86T26 416 aa16.69■□□□□ 0.26
HDDC3-201ENST00000330334 LGI4Q8N135 537 aa16.69■□□□□ 0.26
HDDC3-201ENST00000330334 CREB3L4Q8TEY5 395 aa16.69■□□□□ 0.26
HDDC3-201ENST00000330334 NR4A3Q92570 626 aa16.69■□□□□ 0.26
HDDC3-201ENST00000330334 GPR22Q99680 433 aa16.69■□□□□ 0.26
HDDC3-201ENST00000330334 NT5DC2Q9H857 520 aa16.69■□□□□ 0.26
HDDC3-201ENST00000330334 SAYSD1Q9NPB0 183 aa16.69■□□□□ 0.26
HDDC3-201ENST00000330334 GPRC5BQ9NZH0 403 aa16.69■□□□□ 0.26
HDDC3-201ENST00000330334 ABI3Q9P2A4 366 aa16.69■□□□□ 0.26
HDDC3-201ENST00000330334 SCN2AQ99250 2005 aa16.69■□□□□ 0.26
HDDC3-201ENST00000330334 SCN3AQ9NY46 2000 aa16.69■□□□□ 0.26
HDDC3-201ENST00000330334 NBPF19A0A087WUL8 3843 aa16.68■□□□□ 0.26
HDDC3-201ENST00000330334 FAM159BA6NKW6 160 aa16.68■□□□□ 0.26
HDDC3-201ENST00000330334 A8MUI8 341 aa16.68■□□□□ 0.26
HDDC3-201ENST00000330334 CXorf49A8MYA2 514 aaPredicted RBP16.68■□□□□ 0.26
HDDC3-201ENST00000330334 PRMT3O60678 531 aa16.68■□□□□ 0.26
HDDC3-201ENST00000330334 DNAJB6O75190 326 aa16.68■□□□□ 0.26
HDDC3-201ENST00000330334 C1QAP02745 245 aa16.68■□□□□ 0.26
HDDC3-201ENST00000330334 GP5P40197 560 aa16.68■□□□□ 0.26
HDDC3-201ENST00000330334 TDGF1P3P51864 188 aa16.68■□□□□ 0.26
HDDC3-201ENST00000330334 ATP6V0D1P61421 351 aa16.68■□□□□ 0.26
HDDC3-201ENST00000330334 ETF1P62495 437 aaKnown RBP16.68■□□□□ 0.26
HDDC3-201ENST00000330334 MRPS25P82663 173 aaKnown RBP16.68■□□□□ 0.26
HDDC3-201ENST00000330334 USP10Q14694 798 aaKnown RBP16.68■□□□□ 0.26
HDDC3-201ENST00000330334 RBBP5Q15291 538 aaKnown RBP16.68■□□□□ 0.26
HDDC3-201ENST00000330334 MEP1AQ16819 746 aa16.68■□□□□ 0.26
HDDC3-201ENST00000330334 TMIGD1Q6UXZ0 262 aa16.68■□□□□ 0.26
HDDC3-201ENST00000330334 UBXN10Q96LJ8 280 aa16.68■□□□□ 0.26
HDDC3-201ENST00000330334 MAGEB10Q96LZ2 347 aaPredicted RBP16.68■□□□□ 0.26
HDDC3-201ENST00000330334 RBBP8Q99708 897 aa16.68■□□□□ 0.26
HDDC3-201ENST00000330334 DPH5Q9H2P9 285 aa16.68■□□□□ 0.26
HDDC3-201ENST00000330334 EHD1Q9H4M9 534 aa16.68■□□□□ 0.26
HDDC3-201ENST00000330334 CNOT10Q9H9A5 744 aaKnown RBP16.68■□□□□ 0.26
HDDC3-201ENST00000330334 KCNK13Q9HB14 408 aa16.68■□□□□ 0.26
HDDC3-201ENST00000330334 UTP11Q9Y3A2 253 aaKnown RBP16.68■□□□□ 0.26
HDDC3-201ENST00000330334 SVILO95425 2214 aa16.68■□□□□ 0.26
HDDC3-201ENST00000330334 A0A1B0GUH1 482 aa16.67■□□□□ 0.26
HDDC3-201ENST00000330334 CTAGE15A4D2H0 777 aa16.67■□□□□ 0.26
HDDC3-201ENST00000330334 CDC123O75794 336 aaPredicted RBP16.67■□□□□ 0.26
HDDC3-201ENST00000330334 PIAS1O75925 651 aa16.67■□□□□ 0.26
HDDC3-201ENST00000330334 WDR47O94967 919 aa16.67■□□□□ 0.26
HDDC3-201ENST00000330334 RASAL1O95294 804 aa16.67■□□□□ 0.26
HDDC3-201ENST00000330334 RNH1P13489 461 aaKnown RBP16.67■□□□□ 0.26
HDDC3-201ENST00000330334 STMN1P16949 149 aa16.67■□□□□ 0.26
HDDC3-201ENST00000330334 CASQ1P31415 396 aa16.67■□□□□ 0.26
HDDC3-201ENST00000330334 GDF5P43026 501 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms