RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 CEP68Q76N32 757 aa21.67■■□□□ 1.06
CDX1-201ENST00000231656 OR7A2PQ8NGA2 310 aa21.67■■□□□ 1.06
CDX1-201ENST00000231656 OR10A6Q8NH74 314 aa21.67■■□□□ 1.06
CDX1-201ENST00000231656 PPWD1Q96BP3 646 aaKnown RBP21.67■■□□□ 1.06
CDX1-201ENST00000231656 ZC3H10Q96K80 434 aaKnown RBP21.67■■□□□ 1.06
CDX1-201ENST00000231656 NSMCE2Q96MF7 247 aa21.67■■□□□ 1.06
CDX1-201ENST00000231656 REXO4Q9GZR2 422 aaKnown RBP21.67■■□□□ 1.06
CDX1-201ENST00000231656 COQ10BQ9H8M1 238 aa21.67■■□□□ 1.06
CDX1-201ENST00000231656 AGPAT4Q9NRZ5 378 aa21.67■■□□□ 1.06
CDX1-201ENST00000231656 SIRT5Q9NXA8 310 aa21.67■■□□□ 1.06
CDX1-201ENST00000231656 SPATA7Q9P0W8 599 aa21.67■■□□□ 1.06
CDX1-201ENST00000231656 ANAPC2Q9UJX6 822 aa21.67■■□□□ 1.06
CDX1-201ENST00000231656 TSC22D4Q9Y3Q8 395 aa21.67■■□□□ 1.06
CDX1-201ENST00000231656 A0A1B0GVT2 93 aa21.66■■□□□ 1.06
CDX1-201ENST00000231656 SH3BGRLO75368 114 aa21.66■■□□□ 1.06
CDX1-201ENST00000231656 CDH1P12830 882 aa21.66■■□□□ 1.06
CDX1-201ENST00000231656 TIA1P31483 386 aaKnown RBP eCLIP21.66■■□□□ 1.06
CDX1-201ENST00000231656 HSD17B2P37059 387 aa21.66■■□□□ 1.06
CDX1-201ENST00000231656 SLC19A1P41440 591 aa21.66■■□□□ 1.06
CDX1-201ENST00000231656 MED21Q13503 144 aa21.66■■□□□ 1.06
CDX1-201ENST00000231656 ELOCQ15369 112 aa21.66■■□□□ 1.06
CDX1-201ENST00000231656 ANGPT1Q15389 498 aa21.66■■□□□ 1.06
CDX1-201ENST00000231656 GALNT18Q6P9A2 607 aa21.66■■□□□ 1.06
CDX1-201ENST00000231656 C2orf73Q8N5S3 287 aaPredicted RBP21.66■■□□□ 1.06
CDX1-201ENST00000231656 ZBTB44Q8NCP5 570 aa21.66■■□□□ 1.06
CDX1-201ENST00000231656 OR2T12Q8NG77 320 aa21.66■■□□□ 1.06
CDX1-201ENST00000231656 OR8J2Q8NGG1 315 aa21.66■■□□□ 1.06
CDX1-201ENST00000231656 OR52E1Q8NGJ3 308 aa21.66■■□□□ 1.06
CDX1-201ENST00000231656 KAT8Q9H7Z6 458 aaKnown RBP21.66■■□□□ 1.06
CDX1-201ENST00000231656 RAB26Q9ULW5 256 aa21.66■■□□□ 1.06
CDX1-201ENST00000231656 KMT2EQ8IZD2 1858 aa21.66■■□□□ 1.06
CDX1-201ENST00000231656 TMEM131Q92545 1883 aa21.66■■□□□ 1.06
CDX1-201ENST00000231656 MAGEA13PA6NCF6 341 aa21.66■■□□□ 1.06
CDX1-201ENST00000231656 H0YJX3 145 aa21.66■■□□□ 1.06
CDX1-201ENST00000231656 DENRO43583 198 aaKnown RBP21.66■■□□□ 1.06
CDX1-201ENST00000231656 SCN2BO60939 215 aa21.66■■□□□ 1.06
CDX1-201ENST00000231656 NDUFS1P28331 727 aa21.66■■□□□ 1.06
CDX1-201ENST00000231656 ASMTP46597 345 aa21.66■■□□□ 1.06
CDX1-201ENST00000231656 HNRNPKP61978 463 aaKnown RBP eCLIP21.66■■□□□ 1.06
CDX1-201ENST00000231656 MEF2AQ02078 507 aaPredicted RBP21.66■■□□□ 1.06
CDX1-201ENST00000231656 CALHM3Q86XJ0 350 aa21.66■■□□□ 1.06
CDX1-201ENST00000231656 FAM129CQ86XR2 697 aa21.66■■□□□ 1.06
CDX1-201ENST00000231656 TMEM132CQ8N3T6 1108 aa21.66■■□□□ 1.06
CDX1-201ENST00000231656 GALNT4Q8N4A0 578 aa21.66■■□□□ 1.06
CDX1-201ENST00000231656 GPR156Q8NFN8 814 aa21.66■■□□□ 1.06
CDX1-201ENST00000231656 PATE1Q8WXA2 126 aa21.66■■□□□ 1.06
CDX1-201ENST00000231656 CXorf40BQ96DE9 158 aa21.66■■□□□ 1.06
CDX1-201ENST00000231656 VCXQ9H320 206 aa21.66■■□□□ 1.06
CDX1-201ENST00000231656 KIR3DX1Q9H7L2 352 aa21.66■■□□□ 1.06
CDX1-201ENST00000231656 MYO15AQ9UKN7 3530 aa21.66■■□□□ 1.06
CDX1-201ENST00000231656 ANXA6P08133 673 aa21.65■■□□□ 1.06
CDX1-201ENST00000231656 ANXA4P09525 319 aaPredicted RBP21.65■■□□□ 1.06
CDX1-201ENST00000231656 TRPC1P48995 793 aa21.65■■□□□ 1.06
CDX1-201ENST00000231656 GZMMP51124 257 aa21.65■■□□□ 1.06
CDX1-201ENST00000231656 POLE2P56282 527 aa21.65■■□□□ 1.06
CDX1-201ENST00000231656 DUOXA1Q1HG43 343 aa21.65■■□□□ 1.06
CDX1-201ENST00000231656 NAGSQ8N159 534 aa21.65■■□□□ 1.06
CDX1-201ENST00000231656 RAB42Q8N4Z0 105 aa21.65■■□□□ 1.06
CDX1-201ENST00000231656 ZNF740Q8NDX6 193 aa21.65■■□□□ 1.06
CDX1-201ENST00000231656 FAM46DQ8NEK8 389 aa21.65■■□□□ 1.06
CDX1-201ENST00000231656 TNIP2Q8NFZ5 429 aa21.65■■□□□ 1.06
CDX1-201ENST00000231656 LMX1AQ8TE12 382 aa21.65■■□□□ 1.06
CDX1-201ENST00000231656 STARD8Q92502 1023 aa21.65■■□□□ 1.06
CDX1-201ENST00000231656 UBE2E3Q969T4 207 aa21.65■■□□□ 1.06
CDX1-201ENST00000231656 AURKBQ96GD4 344 aaPredicted RBP21.65■■□□□ 1.06
CDX1-201ENST00000231656 GBP5Q96PP8 586 aa21.65■■□□□ 1.06
CDX1-201ENST00000231656 GORASP2Q9H8Y8 452 aa21.65■■□□□ 1.06
CDX1-201ENST00000231656 SPASTQ9UBP0 616 aa21.65■■□□□ 1.06
CDX1-201ENST00000231656 SUSD2Q9UGT4 822 aa21.65■■□□□ 1.06
CDX1-201ENST00000231656 CABIN1Q9Y6J0 2220 aa21.65■■□□□ 1.06
CDX1-201ENST00000231656 SCAMP2O15127 329 aaKnown RBP21.64■■□□□ 1.06
CDX1-201ENST00000231656 GSNP06396 782 aa21.64■■□□□ 1.06
CDX1-201ENST00000231656 UBTFL6P0CB48 400 aaPredicted RBP21.64■■□□□ 1.06
CDX1-201ENST00000231656 FCGR1AP12314 374 aa21.64■■□□□ 1.06
CDX1-201ENST00000231656 COX7A2P14406 83 aa21.64■■□□□ 1.06
CDX1-201ENST00000231656 FASP25445 335 aa21.64■■□□□ 1.06
CDX1-201ENST00000231656 PIK3CBP42338 1070 aa21.64■■□□□ 1.06
CDX1-201ENST00000231656 HSPA13P48723 471 aa21.64■■□□□ 1.06
CDX1-201ENST00000231656 RAB28P51157 221 aa21.64■■□□□ 1.06
CDX1-201ENST00000231656 SFTPA2Q8IWL1 248 aa21.64■■□□□ 1.06
CDX1-201ENST00000231656 LINC01555Q8NAE3 123 aa21.64■■□□□ 1.06
CDX1-201ENST00000231656 PIGKQ92643 395 aa21.64■■□□□ 1.06
CDX1-201ENST00000231656 MIEF2Q96C03 454 aa21.64■■□□□ 1.06
CDX1-201ENST00000231656 XKR8Q9H6D3 395 aa21.64■■□□□ 1.06
CDX1-201ENST00000231656 ERVMER34-1Q9H9K5 563 aa21.64■■□□□ 1.06
CDX1-201ENST00000231656 FAM120CQ9NX05 1096 aaKnown RBP21.64■■□□□ 1.06
CDX1-201ENST00000231656 SNX11Q9Y5W9 270 aa21.64■■□□□ 1.06
CDX1-201ENST00000231656 AK5Q9Y6K8 562 aa21.64■■□□□ 1.06
CDX1-201ENST00000231656 FAM86C2PA6NEL3 165 aa21.64■■□□□ 1.05
CDX1-201ENST00000231656 OR5K4A6NMS3 321 aa21.64■■□□□ 1.05
CDX1-201ENST00000231656 FAM220BPB1ANY3 271 aa21.64■■□□□ 1.05
CDX1-201ENST00000231656 RFXANKO14593 260 aa21.64■■□□□ 1.05
CDX1-201ENST00000231656 PCDH7O60245 1069 aa21.64■■□□□ 1.05
CDX1-201ENST00000231656 LYNP07948 512 aa21.64■■□□□ 1.05
CDX1-201ENST00000231656 CTSKP43235 329 aa21.64■■□□□ 1.05
CDX1-201ENST00000231656 TMEM154Q6P9G4 183 aa21.64■■□□□ 1.05
CDX1-201ENST00000231656 VN1R5Q7Z5H4 357 aa21.64■■□□□ 1.05
CDX1-201ENST00000231656 CAMKMTQ7Z624 323 aa21.64■■□□□ 1.05
CDX1-201ENST00000231656 C10orf111Q8N326 155 aa21.64■■□□□ 1.05
CDX1-201ENST00000231656 CDC26Q8NHZ8 85 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms