RNA–Protein interactions for RNA: ENST00000640824.1

KCNMA1-290, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 4

Gene KCNMA1, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-290ENST00000640824 RIPK4P57078 832 aa11.56□□□□□ -0.56
KCNMA1-290ENST00000640824 CCDC146Q8IYE0 955 aa11.56□□□□□ -0.56
KCNMA1-290ENST00000640824 THUMPD2Q9BTF0 503 aaKnown RBP11.56□□□□□ -0.56
KCNMA1-290ENST00000640824 SRP68Q9UHB9 627 aaKnown RBP11.56□□□□□ -0.56
KCNMA1-290ENST00000640824 KCPQ6ZWJ8 1503 aa11.55□□□□□ -0.56
KCNMA1-290ENST00000640824 HEG1Q9ULI3 1381 aa11.55□□□□□ -0.56
KCNMA1-290ENST00000640824 DLG5Q8TDM6 1919 aa11.55□□□□□ -0.56
KCNMA1-290ENST00000640824 SIPA1L3O60292 1781 aaPredicted RBP11.55□□□□□ -0.56
KCNMA1-290ENST00000640824 MMP10P09238 476 aa11.55□□□□□ -0.56
KCNMA1-290ENST00000640824 GYS1P13807 737 aa11.55□□□□□ -0.56
KCNMA1-290ENST00000640824 TMPOP42166 694 aaKnown RBP11.55□□□□□ -0.56
KCNMA1-290ENST00000640824 ZBTB1Q9Y2K1 713 aa11.55□□□□□ -0.56
KCNMA1-290ENST00000640824 TJP1Q07157 1748 aa11.55□□□□□ -0.56
KCNMA1-290ENST00000640824 ZPR1O75312 459 aa11.54□□□□□ -0.56
KCNMA1-290ENST00000640824 A1BGP04217 495 aa11.54□□□□□ -0.56
KCNMA1-290ENST00000640824 NEUROD2Q15784 382 aa11.54□□□□□ -0.56
KCNMA1-290ENST00000640824 NLGN2Q8NFZ4 835 aa11.54□□□□□ -0.56
KCNMA1-290ENST00000640824 RUNDC1Q96C34 613 aa11.54□□□□□ -0.56
KCNMA1-290ENST00000640824 RRP7AQ9Y3A4 280 aaKnown RBP11.54□□□□□ -0.56
KCNMA1-290ENST00000640824 CD2APQ9Y5K6 639 aa11.54□□□□□ -0.56
KCNMA1-290ENST00000640824 USP16Q9Y5T5 823 aa11.54□□□□□ -0.56
KCNMA1-290ENST00000640824 SOS1Q07889 1333 aaPredicted RBP11.54□□□□□ -0.56
KCNMA1-290ENST00000640824 PRAMEF22A3QJZ6 481 aa11.53□□□□□ -0.56
KCNMA1-290ENST00000640824 SNRPA1P09661 255 aaKnown RBP11.53□□□□□ -0.56
KCNMA1-290ENST00000640824 FKBP8Q14318 412 aa11.53□□□□□ -0.56
KCNMA1-290ENST00000640824 GPR162Q16538 588 aa11.53□□□□□ -0.56
KCNMA1-290ENST00000640824 USPL1Q5W0Q7 1092 aa11.53□□□□□ -0.56
KCNMA1-290ENST00000640824 PNISRQ8TF01 805 aaKnown RBP11.53□□□□□ -0.56
KCNMA1-290ENST00000640824 UBR2Q8IWV8 1755 aa11.52□□□□□ -0.57
KCNMA1-290ENST00000640824 ANP32CO43423 234 aa11.52□□□□□ -0.57
KCNMA1-290ENST00000640824 EIF5P55010 431 aaKnown RBP11.52□□□□□ -0.57
KCNMA1-290ENST00000640824 CCDC184Q52MB2 194 aa11.52□□□□□ -0.57
KCNMA1-290ENST00000640824 PELP1Q8IZL8 1130 aaKnown RBP11.52□□□□□ -0.57
KCNMA1-290ENST00000640824 NARFQ9UHQ1 456 aa11.52□□□□□ -0.57
KCNMA1-290ENST00000640824 PARP3Q9Y6F1 533 aa11.52□□□□□ -0.57
KCNMA1-290ENST00000640824 USP42Q9H9J4 1324 aaKnown RBP11.52□□□□□ -0.57
KCNMA1-290ENST00000640824 A0A087WZG4 1122 aa11.51□□□□□ -0.57
KCNMA1-290ENST00000640824 TM4SF1P30408 202 aa11.51□□□□□ -0.57
KCNMA1-290ENST00000640824 ZNF330Q9Y3S2 320 aaPredicted RBP11.51□□□□□ -0.57
KCNMA1-290ENST00000640824 IL6STP40189 918 aaPredicted RBP11.5□□□□□ -0.57
KCNMA1-290ENST00000640824 PIP4K2AP48426 406 aaPredicted RBP11.5□□□□□ -0.57
KCNMA1-290ENST00000640824 EIF4A1P60842 406 aaKnown RBP11.5□□□□□ -0.57
KCNMA1-290ENST00000640824 LMOD3Q0VAK6 560 aa11.5□□□□□ -0.57
KCNMA1-290ENST00000640824 NPM2Q86SE8 214 aaKnown RBP11.5□□□□□ -0.57
KCNMA1-290ENST00000640824 TBC1D2BQ9UPU7 963 aa11.5□□□□□ -0.57
KCNMA1-290ENST00000640824 CICQ96RK0 1608 aaPredicted RBP11.49□□□□□ -0.57
KCNMA1-290ENST00000640824 BCL2L12Q9HB09 334 aa11.49□□□□□ -0.57
KCNMA1-290ENST00000640824 TSPYL4Q9UJ04 414 aa11.49□□□□□ -0.57
KCNMA1-290ENST00000640824 TRIM35Q9UPQ4 493 aa11.49□□□□□ -0.57
KCNMA1-290ENST00000640824 COL15A1P39059 1388 aa11.49□□□□□ -0.57
KCNMA1-290ENST00000640824 APAF1O14727 1248 aa11.48□□□□□ -0.57
KCNMA1-290ENST00000640824 GIGYF1O75420 1035 aaPredicted RBP11.48□□□□□ -0.57
KCNMA1-290ENST00000640824 DDR1Q08345 913 aa11.48□□□□□ -0.57
KCNMA1-290ENST00000640824 NFIXQ14938 502 aa11.48□□□□□ -0.57
KCNMA1-290ENST00000640824 LAS1LQ9Y4W2 734 aaKnown RBP11.48□□□□□ -0.57
KCNMA1-290ENST00000640824 C4AP0C0L4 1744 aa11.47□□□□□ -0.57
KCNMA1-290ENST00000640824 A0A0G2JLW4 131 aa11.47□□□□□ -0.57
KCNMA1-290ENST00000640824 NBPF26B4DH59 902 aa11.47□□□□□ -0.57
KCNMA1-290ENST00000640824 POLRMTO00411 1230 aaKnown RBP11.47□□□□□ -0.57
KCNMA1-290ENST00000640824 YBX3P16989 372 aaKnown RBP eCLIP11.47□□□□□ -0.57
KCNMA1-290ENST00000640824 YY1P25490 414 aa11.47□□□□□ -0.57
KCNMA1-290ENST00000640824 TGFB2P61812 414 aa11.47□□□□□ -0.57
KCNMA1-290ENST00000640824 NBPF10Q6P3W6 841 aaKnown RBP11.47□□□□□ -0.57
KCNMA1-290ENST00000640824 BICDL1Q6ZP65 573 aa11.47□□□□□ -0.57
KCNMA1-290ENST00000640824 NBPF15Q8N660 670 aa11.47□□□□□ -0.57
KCNMA1-290ENST00000640824 BABAM1Q9NWV8 329 aa11.47□□□□□ -0.57
KCNMA1-290ENST00000640824 WWC3Q9ULE0 1092 aa11.47□□□□□ -0.57
KCNMA1-290ENST00000640824 UTRNP46939 3433 aa11.47□□□□□ -0.57
KCNMA1-290ENST00000640824 GRIN3BO60391 1043 aa11.46□□□□□ -0.57
KCNMA1-290ENST00000640824 DZIP3Q86Y13 1208 aaKnown RBP11.46□□□□□ -0.57
KCNMA1-290ENST00000640824 NGEFQ8N5V2 710 aa11.46□□□□□ -0.57
KCNMA1-290ENST00000640824 MRS2Q9HD23 443 aa11.46□□□□□ -0.57
KCNMA1-290ENST00000640824 CHL1O00533 1208 aa11.45□□□□□ -0.58
KCNMA1-290ENST00000640824 CAMTA2O94983 1202 aa11.45□□□□□ -0.58
KCNMA1-290ENST00000640824 SERPINB2P05120 415 aa11.45□□□□□ -0.58
KCNMA1-290ENST00000640824 DPEP1P16444 411 aa11.45□□□□□ -0.58
KCNMA1-290ENST00000640824 EIF2S2P20042 333 aaKnown RBP11.45□□□□□ -0.58
KCNMA1-290ENST00000640824 TBC1D9BQ66K14 1250 aa11.45□□□□□ -0.58
KCNMA1-290ENST00000640824 GOLGB1Q14789 3259 aaKnown RBP11.45□□□□□ -0.58
KCNMA1-290ENST00000640824 SENP3-EIF4A1A0A087X0R7 540 aa11.44□□□□□ -0.58
KCNMA1-290ENST00000640824 SETDB2Q96T68 719 aa11.44□□□□□ -0.58
KCNMA1-290ENST00000640824 KDM3BQ7LBC6 1761 aa11.44□□□□□ -0.58
KCNMA1-290ENST00000640824 MYL6BP14649 208 aa11.43□□□□□ -0.58
KCNMA1-290ENST00000640824 KCNA3P22001 575 aa11.43□□□□□ -0.58
KCNMA1-290ENST00000640824 CHD4Q14839 1912 aa11.43□□□□□ -0.58
KCNMA1-290ENST00000640824 N4BP2Q86UW6 1770 aaPredicted RBP11.42□□□□□ -0.58
KCNMA1-290ENST00000640824 KRT24Q2M2I5 525 aa11.42□□□□□ -0.58
KCNMA1-290ENST00000640824 CLEC4GQ6UXB4 293 aa11.42□□□□□ -0.58
KCNMA1-290ENST00000640824 NECTIN2Q92692 538 aa11.42□□□□□ -0.58
KCNMA1-290ENST00000640824 CFAP44Q96MT7 982 aa11.42□□□□□ -0.58
KCNMA1-290ENST00000640824 BCS1LQ9Y276 419 aa11.42□□□□□ -0.58
KCNMA1-290ENST00000640824 C10orf71Q711Q0 1435 aa11.42□□□□□ -0.58
KCNMA1-290ENST00000640824 ZNF853P0CG23 659 aa11.41□□□□□ -0.58
KCNMA1-290ENST00000640824 CHRNA5P30532 468 aa11.41□□□□□ -0.58
KCNMA1-290ENST00000640824 HLFQ16534 295 aa11.41□□□□□ -0.58
KCNMA1-290ENST00000640824 TTLL7Q6ZT98 887 aa11.41□□□□□ -0.58
KCNMA1-290ENST00000640824 CCDC24Q8N4L8 307 aa11.41□□□□□ -0.58
KCNMA1-290ENST00000640824 RNF39Q9H2S5 420 aa11.41□□□□□ -0.58
KCNMA1-290ENST00000640824 PIM2Q9P1W9 311 aa11.41□□□□□ -0.58
KCNMA1-290ENST00000640824 AFDNP55196 1824 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms