RNA–Protein interactions for RNA: ENST00000639167.1

NECAP1-216, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5 BASIC

Gene NECAP1, Length 2,197 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-216ENST00000639167 PALD1Q9ULE6 856 aa12.96□□□□□ -0.33
NECAP1-216ENST00000639167 NPHP4O75161 1426 aaPredicted RBP12.96□□□□□ -0.33
NECAP1-216ENST00000639167 KDM3BQ7LBC6 1761 aa12.96□□□□□ -0.34
NECAP1-216ENST00000639167 N4BP2Q86UW6 1770 aaPredicted RBP12.96□□□□□ -0.34
NECAP1-216ENST00000639167 PRAMEF22A3QJZ6 481 aa12.96□□□□□ -0.34
NECAP1-216ENST00000639167 POLA2Q14181 598 aa12.96□□□□□ -0.34
NECAP1-216ENST00000639167 RHPN1Q8TCX5 695 aa12.96□□□□□ -0.34
NECAP1-216ENST00000639167 GRPEL1Q9HAV7 217 aa12.96□□□□□ -0.34
NECAP1-216ENST00000639167 AXIN2Q9Y2T1 843 aa12.96□□□□□ -0.34
NECAP1-216ENST00000639167 TUBGCP6Q96RT7 1819 aa12.95□□□□□ -0.34
NECAP1-216ENST00000639167 GOLGA6L22H0YM25 854 aa12.95□□□□□ -0.34
NECAP1-216ENST00000639167 HOXB7P09629 217 aa12.95□□□□□ -0.34
NECAP1-216ENST00000639167 MRE11P49959 708 aa12.95□□□□□ -0.34
NECAP1-216ENST00000639167 NUCB2P80303 420 aa12.95□□□□□ -0.34
NECAP1-216ENST00000639167 AMOTQ4VCS5 1084 aa12.95□□□□□ -0.34
NECAP1-216ENST00000639167 MCTP1Q6DN14 999 aa12.95□□□□□ -0.34
NECAP1-216ENST00000639167 NOL8Q76FK4 1167 aaKnown RBP12.95□□□□□ -0.34
NECAP1-216ENST00000639167 GAS2L3Q86XJ1 694 aa12.95□□□□□ -0.34
NECAP1-216ENST00000639167 IL25Q9H293 177 aa12.95□□□□□ -0.34
NECAP1-216ENST00000639167 ZNF142P52746 1687 aaPredicted RBP12.95□□□□□ -0.34
NECAP1-216ENST00000639167 ADCY9O60503 1353 aa12.95□□□□□ -0.34
NECAP1-216ENST00000639167 PTMSP20962 102 aa12.94□□□□□ -0.34
NECAP1-216ENST00000639167 PROSER3Q2NL68 480 aa12.94□□□□□ -0.34
NECAP1-216ENST00000639167 FAM43AQ8N2R8 423 aa12.94□□□□□ -0.34
NECAP1-216ENST00000639167 FBXO3Q9UK99 471 aa12.94□□□□□ -0.34
NECAP1-216ENST00000639167 RAB11FIP3O75154 756 aa12.94□□□□□ -0.34
NECAP1-216ENST00000639167 CYP2E1P05181 493 aaPredicted RBP12.94□□□□□ -0.34
NECAP1-216ENST00000639167 MCCP23508 829 aa12.94□□□□□ -0.34
NECAP1-216ENST00000639167 CLEC17AQ6ZS10 378 aa12.94□□□□□ -0.34
NECAP1-216ENST00000639167 KRT28Q7Z3Y7 464 aa12.94□□□□□ -0.34
NECAP1-216ENST00000639167 LMO7Q8WWI1 1683 aa12.94□□□□□ -0.34
NECAP1-216ENST00000639167 PROSER2Q86WR7 435 aaPredicted RBP12.93□□□□□ -0.34
NECAP1-216ENST00000639167 UBE2Q2Q8WVN8 375 aa12.93□□□□□ -0.34
NECAP1-216ENST00000639167 MAP3K2Q9Y2U5 619 aa12.93□□□□□ -0.34
NECAP1-216ENST00000639167 DDX49Q9Y6V7 483 aaKnown RBP12.93□□□□□ -0.34
NECAP1-216ENST00000639167 ZC3H6P61129 1189 aaKnown RBP12.93□□□□□ -0.34
NECAP1-216ENST00000639167 FOXD4L5Q5VV16 416 aaPredicted RBP12.93□□□□□ -0.34
NECAP1-216ENST00000639167 FOXD4L4Q8WXT5 416 aaPredicted RBP12.93□□□□□ -0.34
NECAP1-216ENST00000639167 KIF1BPQ96EK5 621 aa12.93□□□□□ -0.34
NECAP1-216ENST00000639167 TMX3Q96JJ7 454 aa12.93□□□□□ -0.34
NECAP1-216ENST00000639167 CHAMP1Q96JM3 812 aa12.93□□□□□ -0.34
NECAP1-216ENST00000639167 CWC22Q9HCG8 908 aaKnown RBP12.93□□□□□ -0.34
NECAP1-216ENST00000639167 DBF4Q9UBU7 674 aaPredicted RBP12.93□□□□□ -0.34
NECAP1-216ENST00000639167 GIGYF1O75420 1035 aaPredicted RBP12.92□□□□□ -0.34
NECAP1-216ENST00000639167 OS9Q13438 667 aaPredicted RBP12.92□□□□□ -0.34
NECAP1-216ENST00000639167 PI4K2BQ8TCG2 481 aa12.92□□□□□ -0.34
NECAP1-216ENST00000639167 RRAGDQ9NQL2 400 aaPredicted RBP12.92□□□□□ -0.34
NECAP1-216ENST00000639167 ZDHHC9Q9Y397 364 aa12.92□□□□□ -0.34
NECAP1-216ENST00000639167 AOX1Q06278 1338 aa12.92□□□□□ -0.34
NECAP1-216ENST00000639167 SLIT3O75094 1523 aa12.91□□□□□ -0.34
NECAP1-216ENST00000639167 NCLP19338 710 aaKnown RBP12.91□□□□□ -0.34
NECAP1-216ENST00000639167 UPF3BQ9BZI7 483 aaKnown RBP12.91□□□□□ -0.34
NECAP1-216ENST00000639167 PHRF1Q9P1Y6 1649 aaKnown RBP12.91□□□□□ -0.34
NECAP1-216ENST00000639167 CWF19L2Q2TBE0 894 aaKnown RBP12.91□□□□□ -0.34
NECAP1-216ENST00000639167 CHMP4AQ9BY43 222 aa12.91□□□□□ -0.34
NECAP1-216ENST00000639167 C9orf78Q9NZ63 289 aaPredicted RBP12.91□□□□□ -0.34
NECAP1-216ENST00000639167 AIMP1Q12904 312 aaKnown RBP12.9□□□□□ -0.34
NECAP1-216ENST00000639167 KLHL40Q2TBA0 621 aa12.9□□□□□ -0.34
NECAP1-216ENST00000639167 NCAPD2Q15021 1401 aa12.9□□□□□ -0.34
NECAP1-216ENST00000639167 DDX17Q92841 729 aaKnown RBP12.9□□□□□ -0.34
NECAP1-216ENST00000639167 LMBRD1Q9NUN5 540 aa12.9□□□□□ -0.34
NECAP1-216ENST00000639167 PA2G4Q9UQ80 394 aaKnown RBP12.9□□□□□ -0.34
NECAP1-216ENST00000639167 ANAPC15P60006 121 aa12.89□□□□□ -0.35
NECAP1-216ENST00000639167 SLC39A6Q13433 755 aa12.89□□□□□ -0.35
NECAP1-216ENST00000639167 KSR2Q6VAB6 950 aa12.89□□□□□ -0.35
NECAP1-216ENST00000639167 ISY1Q9ULR0 285 aaKnown RBP12.89□□□□□ -0.35
NECAP1-216ENST00000639167 ADAMTSL3P82987 1691 aa12.89□□□□□ -0.35
NECAP1-216ENST00000639167 PRPF40AO75400 957 aaKnown RBP12.88□□□□□ -0.35
NECAP1-216ENST00000639167 PDIA4P13667 645 aaKnown RBP12.88□□□□□ -0.35
NECAP1-216ENST00000639167 HSP90AB4PQ58FF6 505 aa12.88□□□□□ -0.35
NECAP1-216ENST00000639167 CNTROBQ8N137 903 aa12.88□□□□□ -0.35
NECAP1-216ENST00000639167 NLRP2Q9NX02 1062 aa12.88□□□□□ -0.35
NECAP1-216ENST00000639167 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.88□□□□□ -0.35
NECAP1-216ENST00000639167 ERBB3P21860 1342 aa12.88□□□□□ -0.35
NECAP1-216ENST00000639167 C1orf167Q5SNV9 1468 aa12.88□□□□□ -0.35
NECAP1-216ENST00000639167 ALDH1L1O75891 902 aa12.87□□□□□ -0.35
NECAP1-216ENST00000639167 MCM2P49736 904 aa12.87□□□□□ -0.35
NECAP1-216ENST00000639167 CAVIN1Q6NZI2 390 aaKnown RBP12.87□□□□□ -0.35
NECAP1-216ENST00000639167 RGPD5Q99666 1765 aa12.87□□□□□ -0.35
NECAP1-216ENST00000639167 HEG1Q9ULI3 1381 aa12.87□□□□□ -0.35
NECAP1-216ENST00000639167 TRPM3Q9HCF6 1732 aaPredicted RBP12.87□□□□□ -0.35
NECAP1-216ENST00000639167 SGSM2O43147 1006 aa12.87□□□□□ -0.35
NECAP1-216ENST00000639167 HSPA4P34932 840 aa12.87□□□□□ -0.35
NECAP1-216ENST00000639167 CWC27Q6UX04 472 aaKnown RBP12.87□□□□□ -0.35
NECAP1-216ENST00000639167 MTX1Q13505 466 aa12.86□□□□□ -0.35
NECAP1-216ENST00000639167 CUL4AQ13619 759 aa12.86□□□□□ -0.35
NECAP1-216ENST00000639167 CLASRPQ8N2M8 674 aaKnown RBP12.86□□□□□ -0.35
NECAP1-216ENST00000639167 RAPGEF4Q8WZA2 1011 aa12.86□□□□□ -0.35
NECAP1-216ENST00000639167 SUCLG2Q96I99 432 aa12.86□□□□□ -0.35
NECAP1-216ENST00000639167 ANO8Q9HCE9 1232 aaPredicted RBP12.86□□□□□ -0.35
NECAP1-216ENST00000639167 HYPKQ9NX55 129 aa12.86□□□□□ -0.35
NECAP1-216ENST00000639167 SPG7Q9UQ90 795 aa12.86□□□□□ -0.35
NECAP1-216ENST00000639167 OVOS2A0A0G2JMS6 1433 aa12.86□□□□□ -0.35
NECAP1-216ENST00000639167 MYL6BP14649 208 aa12.86□□□□□ -0.35
NECAP1-216ENST00000639167 PDIA6Q15084 440 aa12.86□□□□□ -0.35
NECAP1-216ENST00000639167 C19orf44Q9H6X5 657 aa12.86□□□□□ -0.35
NECAP1-216ENST00000639167 RAD50Q92878 1312 aa12.85□□□□□ -0.35
NECAP1-216ENST00000639167 CABLES1Q8TDN4 633 aa12.85□□□□□ -0.35
NECAP1-216ENST00000639167 LSG1Q9H089 658 aaKnown RBP12.85□□□□□ -0.35
NECAP1-216ENST00000639167 DDX21Q9NR30 783 aaKnown RBP eCLIP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms