RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 TCERG1LQ5VWI1 586 aa18.9■□□□□ 0.62
CACNA1A-258ENST00000638029 STARD3NLO95772 234 aa18.9■□□□□ 0.62
CACNA1A-258ENST00000638029 CBFA2T2O43439 604 aa18.89■□□□□ 0.62
CACNA1A-258ENST00000638029 TDRD12Q587J7 1177 aaKnown RBP18.89■□□□□ 0.62
CACNA1A-258ENST00000638029 ZNF530Q6P9A1 599 aaPredicted RBP18.89■□□□□ 0.61
CACNA1A-258ENST00000638029 CCT4P50991 539 aaKnown RBP18.89■□□□□ 0.61
CACNA1A-258ENST00000638029 AKNAD1Q5T1N1 836 aa18.89■□□□□ 0.61
CACNA1A-258ENST00000638029 CDKL5O76039 1030 aa18.89■□□□□ 0.61
CACNA1A-258ENST00000638029 MYO1BO43795 1136 aa18.89■□□□□ 0.61
CACNA1A-258ENST00000638029 PRAM1Q96QH2 718 aa18.89■□□□□ 0.61
CACNA1A-258ENST00000638029 NDC80O14777 642 aa18.89■□□□□ 0.61
CACNA1A-258ENST00000638029 SPATA32Q96LK8 384 aa18.89■□□□□ 0.61
CACNA1A-258ENST00000638029 ZNF287Q9HBT7 754 aa18.89■□□□□ 0.61
CACNA1A-258ENST00000638029 CLGNO14967 610 aa18.88■□□□□ 0.61
CACNA1A-258ENST00000638029 CSPG5O95196 566 aa18.88■□□□□ 0.61
CACNA1A-258ENST00000638029 ISM2Q6H9L7 571 aa18.88■□□□□ 0.61
CACNA1A-258ENST00000638029 SETD1BQ9UPS6 1966 aaKnown RBP18.88■□□□□ 0.61
CACNA1A-258ENST00000638029 ADAMTS8Q9UP79 889 aa18.88■□□□□ 0.61
CACNA1A-258ENST00000638029 BCAR3O75815 825 aa18.88■□□□□ 0.61
CACNA1A-258ENST00000638029 TPD52P55327 224 aaPredicted RBP18.87■□□□□ 0.61
CACNA1A-258ENST00000638029 SULT6B1Q6IMI4 303 aa18.87■□□□□ 0.61
CACNA1A-258ENST00000638029 UPF3BQ9BZI7 483 aaKnown RBP18.87■□□□□ 0.61
CACNA1A-258ENST00000638029 A0A1W2PRG0 241 aa18.87■□□□□ 0.61
CACNA1A-258ENST00000638029 FLIIQ13045 1269 aa18.87■□□□□ 0.61
CACNA1A-258ENST00000638029 CCDC63Q8NA47 563 aa18.87■□□□□ 0.61
CACNA1A-258ENST00000638029 GCC1Q96CN9 775 aa18.87■□□□□ 0.61
CACNA1A-258ENST00000638029 CFAP65Q6ZU64 1925 aaKnown RBP18.87■□□□□ 0.61
CACNA1A-258ENST00000638029 GJC1P36383 396 aa18.86■□□□□ 0.61
CACNA1A-258ENST00000638029 TCP11L2Q8N4U5 519 aa18.86■□□□□ 0.61
CACNA1A-258ENST00000638029 SLU7O95391 586 aaKnown RBP18.86■□□□□ 0.61
CACNA1A-258ENST00000638029 NUP88Q99567 741 aaPredicted RBP18.86■□□□□ 0.61
CACNA1A-258ENST00000638029 GTF2A1P52655 376 aaPredicted RBP18.86■□□□□ 0.61
CACNA1A-258ENST00000638029 KRT85P78386 507 aa18.86■□□□□ 0.61
CACNA1A-258ENST00000638029 FERMT1Q9BQL6 677 aa18.86■□□□□ 0.61
CACNA1A-258ENST00000638029 BEGAINQ9BUH8 593 aa18.86■□□□□ 0.61
CACNA1A-258ENST00000638029 EHMT1Q9H9B1 1298 aa18.86■□□□□ 0.61
CACNA1A-258ENST00000638029 DAAM2Q86T65 1068 aa18.85■□□□□ 0.61
CACNA1A-258ENST00000638029 HAUS7Q99871 368 aa18.85■□□□□ 0.61
CACNA1A-258ENST00000638029 TMOD3Q9NYL9 352 aa18.85■□□□□ 0.61
CACNA1A-258ENST00000638029 NAP1L3Q99457 506 aaPredicted RBP18.85■□□□□ 0.61
CACNA1A-258ENST00000638029 MPHOSPH6Q99547 160 aaKnown RBP18.85■□□□□ 0.61
CACNA1A-258ENST00000638029 CDK19Q9BWU1 502 aa18.85■□□□□ 0.61
CACNA1A-258ENST00000638029 CCDC7Q96M83 1385 aa18.85■□□□□ 0.61
CACNA1A-258ENST00000638029 SATB1Q01826 763 aa18.85■□□□□ 0.61
CACNA1A-258ENST00000638029 TMEM110-MUSTN1A8MSY1 372 aa18.84■□□□□ 0.61
CACNA1A-258ENST00000638029 CEP126Q9P2H0 1117 aa18.84■□□□□ 0.61
CACNA1A-258ENST00000638029 ZNF710Q8N1W2 664 aa18.84■□□□□ 0.61
CACNA1A-258ENST00000638029 JAKMIP1Q96N16 626 aaKnown RBP18.84■□□□□ 0.61
CACNA1A-258ENST00000638029 MRVI1Q9Y6F6 885 aa18.84■□□□□ 0.61
CACNA1A-258ENST00000638029 EXOSC9Q06265 439 aaKnown RBP18.84■□□□□ 0.61
CACNA1A-258ENST00000638029 FSD2A1L4K1 749 aa18.84■□□□□ 0.61
CACNA1A-258ENST00000638029 MIS18AQ9NYP9 233 aa18.84■□□□□ 0.61
CACNA1A-258ENST00000638029 SPOUT1Q5T280 376 aaKnown RBP18.84■□□□□ 0.61
CACNA1A-258ENST00000638029 GRPEL1Q9HAV7 217 aa18.84■□□□□ 0.61
CACNA1A-258ENST00000638029 SUPT6HQ7KZ85 1726 aaKnown RBP18.83■□□□□ 0.61
CACNA1A-258ENST00000638029 MAATS1Q7Z4T9 603 aa18.83■□□□□ 0.61
CACNA1A-258ENST00000638029 FKBP15Q5T1M5 1219 aa18.83■□□□□ 0.61
CACNA1A-258ENST00000638029 IKBKGQ9Y6K9 419 aa18.83■□□□□ 0.61
CACNA1A-258ENST00000638029 PNISRQ8TF01 805 aaKnown RBP18.83■□□□□ 0.6
CACNA1A-258ENST00000638029 TRMT1Q9NXH9 659 aaKnown RBP18.83■□□□□ 0.6
CACNA1A-258ENST00000638029 GPTP24298 496 aa18.82■□□□□ 0.6
CACNA1A-258ENST00000638029 NOP9Q86U38 636 aaKnown RBP18.82■□□□□ 0.6
CACNA1A-258ENST00000638029 WDR33Q9C0J8 1336 aaKnown RBP18.82■□□□□ 0.6
CACNA1A-258ENST00000638029 PHACTR2O75167 634 aa18.82■□□□□ 0.6
CACNA1A-258ENST00000638029 BLOC1S2Q6QNY1 142 aa18.82■□□□□ 0.6
CACNA1A-258ENST00000638029 RFC4P35249 363 aa18.82■□□□□ 0.6
CACNA1A-258ENST00000638029 SRCIN1Q9C0H9 1055 aa18.82■□□□□ 0.6
CACNA1A-258ENST00000638029 IMMTQ16891 758 aaKnown RBP18.82■□□□□ 0.6
CACNA1A-258ENST00000638029 BRD4O60885 1362 aaPredicted RBP18.82■□□□□ 0.6
CACNA1A-258ENST00000638029 PDZRN3Q9UPQ7 1066 aa18.81■□□□□ 0.6
CACNA1A-258ENST00000638029 CEP131Q9UPN4 1083 aa18.81■□□□□ 0.6
CACNA1A-258ENST00000638029 TSR2Q969E8 191 aaKnown RBP18.81■□□□□ 0.6
CACNA1A-258ENST00000638029 ZNF644Q9H582 1327 aaPredicted RBP18.81■□□□□ 0.6
CACNA1A-258ENST00000638029 NAPBQ9H115 298 aa18.81■□□□□ 0.6
CACNA1A-258ENST00000638029 CTNNA3Q9UI47 895 aa18.81■□□□□ 0.6
CACNA1A-258ENST00000638029 GTF2F1P35269 517 aaKnown RBP eCLIP18.8■□□□□ 0.6
CACNA1A-258ENST00000638029 SP4Q02446 784 aa18.8■□□□□ 0.6
CACNA1A-258ENST00000638029 KIF4BQ2VIQ3 1234 aa18.8■□□□□ 0.6
CACNA1A-258ENST00000638029 VPS36Q86VN1 386 aa18.8■□□□□ 0.6
CACNA1A-258ENST00000638029 LARP6Q9BRS8 491 aaKnown RBP18.8■□□□□ 0.6
CACNA1A-258ENST00000638029 URI1O94763 535 aaPredicted RBP18.8■□□□□ 0.6
CACNA1A-258ENST00000638029 PDRG1Q9NUG6 133 aa18.8■□□□□ 0.6
CACNA1A-258ENST00000638029 CALCOCO1Q9P1Z2 691 aa18.8■□□□□ 0.6
CACNA1A-258ENST00000638029 PPFIA3O75145 1194 aa18.8■□□□□ 0.6
CACNA1A-258ENST00000638029 ZBTB21Q9ULJ3 1066 aa18.8■□□□□ 0.6
CACNA1A-258ENST00000638029 CASTP20810 708 aaKnown RBP18.8■□□□□ 0.6
CACNA1A-258ENST00000638029 RRS1Q15050 365 aaKnown RBP18.8■□□□□ 0.6
CACNA1A-258ENST00000638029 TMEM266Q2M3C6 531 aa18.8■□□□□ 0.6
CACNA1A-258ENST00000638029 THEMISQ8N1K5 641 aaPredicted RBP18.8■□□□□ 0.6
CACNA1A-258ENST00000638029 ALS2CR12Q96Q35 445 aa18.79■□□□□ 0.6
CACNA1A-258ENST00000638029 IL1RAPL2Q9NP60 686 aa18.79■□□□□ 0.6
CACNA1A-258ENST00000638029 SRGAP3O43295 1099 aa18.79■□□□□ 0.6
CACNA1A-258ENST00000638029 NAA25Q14CX7 972 aa18.79■□□□□ 0.6
CACNA1A-258ENST00000638029 WASF1Q92558 559 aa18.79■□□□□ 0.6
CACNA1A-258ENST00000638029 LRRC45Q96CN5 670 aa18.79■□□□□ 0.6
CACNA1A-258ENST00000638029 SCAPERQ9BY12 1400 aa18.79■□□□□ 0.6
CACNA1A-258ENST00000638029 BAG4O95429 457 aaKnown RBP18.78■□□□□ 0.6
CACNA1A-258ENST00000638029 ERCC3P19447 782 aa18.78■□□□□ 0.6
CACNA1A-258ENST00000638029 PPP2R5CQ13362 524 aa18.78■□□□□ 0.6
CACNA1A-258ENST00000638029 VEZTQ9HBM0 779 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms