RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 RGS22Q8NE09 1264 aa22.27■■□□□ 1.16
CACNA1A-257ENST00000638009 TDO2P48775 406 aa22.27■■□□□ 1.16
CACNA1A-257ENST00000638009 CNTLNQ9NXG0 1405 aa22.27■■□□□ 1.15
CACNA1A-257ENST00000638009 SURF6O75683 361 aaKnown RBP22.26■■□□□ 1.15
CACNA1A-257ENST00000638009 KANK3Q6NY19 840 aa22.26■■□□□ 1.15
CACNA1A-257ENST00000638009 CCDC50Q8IVM0 306 aa22.26■■□□□ 1.15
CACNA1A-257ENST00000638009 IFT74Q96LB3 600 aa22.26■■□□□ 1.15
CACNA1A-257ENST00000638009 CFAP65Q6ZU64 1925 aaKnown RBP22.26■■□□□ 1.15
CACNA1A-257ENST00000638009 NCAPGQ9BPX3 1015 aa22.25■■□□□ 1.15
CACNA1A-257ENST00000638009 CBX1P83916 185 aa22.25■■□□□ 1.15
CACNA1A-257ENST00000638009 VCXQ9H320 206 aa22.25■■□□□ 1.15
CACNA1A-257ENST00000638009 CCDC121Q6ZUS5 278 aa22.25■■□□□ 1.15
CACNA1A-257ENST00000638009 NECTIN2Q92692 538 aa22.25■■□□□ 1.15
CACNA1A-257ENST00000638009 PRKRIP1Q9H875 184 aaPredicted RBP22.25■■□□□ 1.15
CACNA1A-257ENST00000638009 SPDYE4A6NLX3 237 aa22.24■■□□□ 1.15
CACNA1A-257ENST00000638009 TBC1D5Q92609 795 aa22.24■■□□□ 1.15
CACNA1A-257ENST00000638009 ATP2A2P16615 1042 aaKnown RBP22.24■■□□□ 1.15
CACNA1A-257ENST00000638009 GTF2F1P35269 517 aaKnown RBP eCLIP22.24■■□□□ 1.15
CACNA1A-257ENST00000638009 CACNA2D3Q8IZS8 1091 aa22.24■■□□□ 1.15
CACNA1A-257ENST00000638009 GAS2L2Q8NHY3 880 aa22.24■■□□□ 1.15
CACNA1A-257ENST00000638009 CASQ2O14958 399 aaPredicted RBP22.24■■□□□ 1.15
CACNA1A-257ENST00000638009 FMNL3Q8IVF7 1028 aa22.24■■□□□ 1.15
CACNA1A-257ENST00000638009 BRPF3Q9ULD4 1205 aa22.24■■□□□ 1.15
CACNA1A-257ENST00000638009 NDC80O14777 642 aa22.24■■□□□ 1.15
CACNA1A-257ENST00000638009 STMN2Q93045 179 aa22.24■■□□□ 1.15
CACNA1A-257ENST00000638009 CASTP20810 708 aaKnown RBP22.24■■□□□ 1.15
CACNA1A-257ENST00000638009 ARID4AP29374 1257 aaPredicted RBP22.24■■□□□ 1.15
CACNA1A-257ENST00000638009 ATP11AP98196 1134 aa22.24■■□□□ 1.15
CACNA1A-257ENST00000638009 TTC31Q49AM3 519 aaPredicted RBP22.24■■□□□ 1.15
CACNA1A-257ENST00000638009 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.24■■□□□ 1.15
CACNA1A-257ENST00000638009 HYPKQ9NX55 129 aa22.24■■□□□ 1.15
CACNA1A-257ENST00000638009 A0A087WZG4 1122 aa22.23■■□□□ 1.15
CACNA1A-257ENST00000638009 HMGB3O15347 200 aaKnown RBP22.23■■□□□ 1.15
CACNA1A-257ENST00000638009 ZNF853P0CG23 659 aa22.23■■□□□ 1.15
CACNA1A-257ENST00000638009 VIMP08670 466 aaKnown RBP22.23■■□□□ 1.15
CACNA1A-257ENST00000638009 EBAG9O00559 213 aa22.23■■□□□ 1.15
CACNA1A-257ENST00000638009 MVPQ14764 893 aaKnown RBP22.23■■□□□ 1.15
CACNA1A-257ENST00000638009 JADE2Q9NQC1 790 aa22.23■■□□□ 1.15
CACNA1A-257ENST00000638009 APAF1O14727 1248 aa22.23■■□□□ 1.15
CACNA1A-257ENST00000638009 LACTBP83111 547 aaPredicted RBP22.23■■□□□ 1.15
CACNA1A-257ENST00000638009 BRD4O60885 1362 aaPredicted RBP22.22■■□□□ 1.15
CACNA1A-257ENST00000638009 PIP4K2BP78356 416 aa22.22■■□□□ 1.15
CACNA1A-257ENST00000638009 TTC36A6NLP5 189 aa22.22■■□□□ 1.15
CACNA1A-257ENST00000638009 C10orf67Q8IYJ2 551 aa22.22■■□□□ 1.15
CACNA1A-257ENST00000638009 EPSTI1Q96J88 318 aa22.22■■□□□ 1.15
CACNA1A-257ENST00000638009 RBM28Q9NW13 759 aaKnown RBP22.22■■□□□ 1.15
CACNA1A-257ENST00000638009 RAB3IPQ96QF0 476 aaPredicted RBP22.22■■□□□ 1.15
CACNA1A-257ENST00000638009 LRRC27Q9C0I9 530 aa22.22■■□□□ 1.15
CACNA1A-257ENST00000638009 RABGAP1Q9Y3P9 1069 aa22.22■■□□□ 1.15
CACNA1A-257ENST00000638009 SATB1Q01826 763 aa22.22■■□□□ 1.15
CACNA1A-257ENST00000638009 GBP6Q6ZN66 633 aa22.22■■□□□ 1.15
CACNA1A-257ENST00000638009 POLA1P09884 1462 aaPredicted RBP22.22■■□□□ 1.15
CACNA1A-257ENST00000638009 MGEA5O60502 916 aa22.22■■□□□ 1.15
CACNA1A-257ENST00000638009 ARL1P40616 181 aaPredicted RBP22.22■■□□□ 1.15
CACNA1A-257ENST00000638009 PDE3AQ14432 1141 aa22.22■■□□□ 1.15
CACNA1A-257ENST00000638009 NUP133Q8WUM0 1156 aa22.22■■□□□ 1.15
CACNA1A-257ENST00000638009 TRAK1Q9UPV9 953 aa22.22■■□□□ 1.15
CACNA1A-257ENST00000638009 MPHOSPH8Q99549 860 aa22.21■■□□□ 1.15
CACNA1A-257ENST00000638009 L3MBTL2Q969R5 705 aa22.21■■□□□ 1.15
CACNA1A-257ENST00000638009 PRC1O43663 620 aa22.21■■□□□ 1.15
CACNA1A-257ENST00000638009 SF3B2Q13435 895 aaKnown RBP22.21■■□□□ 1.15
CACNA1A-257ENST00000638009 TDRD12Q587J7 1177 aaKnown RBP22.21■■□□□ 1.15
CACNA1A-257ENST00000638009 APBB1IPQ7Z5R6 666 aaPredicted RBP22.21■■□□□ 1.15
CACNA1A-257ENST00000638009 SRRTQ9BXP5 876 aaKnown RBP22.21■■□□□ 1.15
CACNA1A-257ENST00000638009 ST20-MTHFSA0A0A6YYL1 179 aa22.2■■□□□ 1.15
CACNA1A-257ENST00000638009 SEPT14Q6ZU15 432 aa22.2■■□□□ 1.15
CACNA1A-257ENST00000638009 NUF2Q9BZD4 464 aa22.2■■□□□ 1.14
CACNA1A-257ENST00000638009 TNNT1P13805 278 aa22.2■■□□□ 1.14
CACNA1A-257ENST00000638009 OTUD6BQ8N6M0 293 aa22.2■■□□□ 1.14
CACNA1A-257ENST00000638009 B4GALNT4Q76KP1 1039 aa22.2■■□□□ 1.14
CACNA1A-257ENST00000638009 TRIM7Q9C029 511 aa22.2■■□□□ 1.14
CACNA1A-257ENST00000638009 MPHOSPH6Q99547 160 aaKnown RBP22.2■■□□□ 1.14
CACNA1A-257ENST00000638009 GAS8O95995 478 aa22.2■■□□□ 1.14
CACNA1A-257ENST00000638009 ATP5DP30049 168 aa22.2■■□□□ 1.14
CACNA1A-257ENST00000638009 SETDB1Q15047 1291 aa22.2■■□□□ 1.14
CACNA1A-257ENST00000638009 AKAP2Q9Y2D5 859 aa22.2■■□□□ 1.14
CACNA1A-257ENST00000638009 TXNDC16Q9P2K2 825 aa22.2■■□□□ 1.14
CACNA1A-257ENST00000638009 STX1AQ16623 288 aa22.19■■□□□ 1.14
CACNA1A-257ENST00000638009 SCLT1Q96NL6 688 aa22.19■■□□□ 1.14
CACNA1A-257ENST00000638009 SH2B1Q9NRF2 756 aaPredicted RBP22.19■■□□□ 1.14
CACNA1A-257ENST00000638009 SNW1Q13573 536 aaKnown RBP22.19■■□□□ 1.14
CACNA1A-257ENST00000638009 CCDC12Q8WUD4 166 aaPredicted RBP22.19■■□□□ 1.14
CACNA1A-257ENST00000638009 SERPINA10Q9UK55 444 aa22.19■■□□□ 1.14
CACNA1A-257ENST00000638009 USP25Q9UHP3 1055 aa22.19■■□□□ 1.14
CACNA1A-257ENST00000638009 CTAGE1Q96RT6 745 aa22.19■■□□□ 1.14
CACNA1A-257ENST00000638009 LRSAM1Q6UWE0 723 aa22.18■■□□□ 1.14
CACNA1A-257ENST00000638009 IBSPP21815 317 aaPredicted RBP22.18■■□□□ 1.14
CACNA1A-257ENST00000638009 PPP4R3BQ5MIZ7 849 aa22.18■■□□□ 1.14
CACNA1A-257ENST00000638009 CUL5Q93034 780 aa22.18■■□□□ 1.14
CACNA1A-257ENST00000638009 CIB2O75838 187 aa22.18■■□□□ 1.14
CACNA1A-257ENST00000638009 MAP7Q14244 749 aa22.18■■□□□ 1.14
CACNA1A-257ENST00000638009 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.18■■□□□ 1.14
CACNA1A-257ENST00000638009 PRPF4BQ13523 1007 aaKnown RBP22.17■■□□□ 1.14
CACNA1A-257ENST00000638009 GABPB2Q8TAK5 448 aaPredicted RBP22.17■■□□□ 1.14
CACNA1A-257ENST00000638009 GBP1P32455 592 aa22.17■■□□□ 1.14
CACNA1A-257ENST00000638009 NOP2P46087 812 aaKnown RBP22.17■■□□□ 1.14
CACNA1A-257ENST00000638009 PDRG1Q9NUG6 133 aa22.17■■□□□ 1.14
CACNA1A-257ENST00000638009 LMNTD2Q8IXW0 634 aa22.17■■□□□ 1.14
CACNA1A-257ENST00000638009 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.17■■□□□ 1.14
CACNA1A-257ENST00000638009 PHLDB2Q86SQ0 1253 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms