RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-238	ENST00000637276	ZNF644	Q9H582	1327 aa	Predicted RBP	18.98	■□□□□ 0.63
CACNA1A-238	ENST00000637276	BIRC2	Q13490	618 aa		18.98	■□□□□ 0.63
CACNA1A-238	ENST00000637276	SKAP1	Q86WV1	359 aa		18.98	■□□□□ 0.63
CACNA1A-238	ENST00000637276		A0A1W2PRG0	241 aa		18.98	■□□□□ 0.63
CACNA1A-238	ENST00000637276	NAA25	Q14CX7	972 aa		18.98	■□□□□ 0.63
CACNA1A-238	ENST00000637276	GPRASP1	Q5JY77	1395 aa		18.98	■□□□□ 0.63
CACNA1A-238	ENST00000637276	ZNF444	Q8N0Y2	327 aa	Predicted RBP	18.97	■□□□□ 0.63
CACNA1A-238	ENST00000637276	CRACR2A	Q9BSW2	395 aa		18.97	■□□□□ 0.63
CACNA1A-238	ENST00000637276	CNTLN	Q9NXG0	1405 aa		18.97	■□□□□ 0.63
CACNA1A-238	ENST00000637276	ERCC3	P19447	782 aa		18.97	■□□□□ 0.63
CACNA1A-238	ENST00000637276	PIP4K2A	P48426	406 aa	Predicted RBP	18.97	■□□□□ 0.63
CACNA1A-238	ENST00000637276	MRRF	Q96E11	262 aa	Known RBP	18.97	■□□□□ 0.63
CACNA1A-238	ENST00000637276	ZNF530	Q6P9A1	599 aa	Predicted RBP	18.97	■□□□□ 0.63
CACNA1A-238	ENST00000637276	FAM160A1	Q05DH4	1040 aa		18.96	■□□□□ 0.63
CACNA1A-238	ENST00000637276	CCDC83	Q8IWF9	413 aa		18.96	■□□□□ 0.63
CACNA1A-238	ENST00000637276	GRPEL1	Q9HAV7	217 aa		18.96	■□□□□ 0.63
CACNA1A-238	ENST00000637276	GNAI3	P08754	354 aa		18.96	■□□□□ 0.63
CACNA1A-238	ENST00000637276	SYCE3	A1L190	88 aa		18.96	■□□□□ 0.63
CACNA1A-238	ENST00000637276	DNAI2	Q9GZS0	605 aa		18.96	■□□□□ 0.63
CACNA1A-238	ENST00000637276	AKNA	Q7Z591	1439 aa		18.96	■□□□□ 0.63
CACNA1A-238	ENST00000637276	ERLIN1	O75477	346 aa		18.96	■□□□□ 0.63
CACNA1A-238	ENST00000637276	PPP2R5D	Q14738	602 aa		18.95	■□□□□ 0.62
CACNA1A-238	ENST00000637276	ODF2L	Q9ULJ1	636 aa		18.95	■□□□□ 0.62
CACNA1A-238	ENST00000637276	DHX57	Q6P158	1386 aa	Known RBP	18.95	■□□□□ 0.62
CACNA1A-238	ENST00000637276	URI1	O94763	535 aa	Predicted RBP	18.95	■□□□□ 0.62
CACNA1A-238	ENST00000637276	SMG6	Q86US8	1419 aa	Known RBP	18.95	■□□□□ 0.62
CACNA1A-238	ENST00000637276	JMY	Q8N9B5	988 aa		18.95	■□□□□ 0.62
CACNA1A-238	ENST00000637276	ARID5A	Q03989	594 aa		18.95	■□□□□ 0.62
CACNA1A-238	ENST00000637276	SF3A3	Q12874	501 aa	Known RBP eCLIP	18.95	■□□□□ 0.62
CACNA1A-238	ENST00000637276	PICALM	Q13492	652 aa		18.95	■□□□□ 0.62
CACNA1A-238	ENST00000637276	CCDC65	Q8IXS2	484 aa		18.95	■□□□□ 0.62
CACNA1A-238	ENST00000637276	BOLA2	Q9H3K6	86 aa		18.95	■□□□□ 0.62
CACNA1A-238	ENST00000637276	KIF7	Q2M1P5	1343 aa		18.95	■□□□□ 0.62
CACNA1A-238	ENST00000637276	SATB1	Q01826	763 aa		18.95	■□□□□ 0.62
CACNA1A-238	ENST00000637276	UIMC1	Q96RL1	719 aa		18.94	■□□□□ 0.62
CACNA1A-238	ENST00000637276	PFDN4	Q9NQP4	134 aa		18.94	■□□□□ 0.62
CACNA1A-238	ENST00000637276	HIP1	O00291	1037 aa		18.94	■□□□□ 0.62
CACNA1A-238	ENST00000637276	RASA3	Q14644	834 aa		18.94	■□□□□ 0.62
CACNA1A-238	ENST00000637276	MYD88	Q99836	296 aa		18.94	■□□□□ 0.62
CACNA1A-238	ENST00000637276		K7ELQ4	463 aa	Predicted RBP	18.93	■□□□□ 0.62
CACNA1A-238	ENST00000637276	PDC	P20941	246 aa		18.93	■□□□□ 0.62
CACNA1A-238	ENST00000637276	SHTN1	A0MZ66	631 aa		18.93	■□□□□ 0.62
CACNA1A-238	ENST00000637276	HAUS7	Q99871	368 aa		18.93	■□□□□ 0.62
CACNA1A-238	ENST00000637276	SRGAP3	O43295	1099 aa		18.93	■□□□□ 0.62
CACNA1A-238	ENST00000637276	PRDM11	Q9NQV5	511 aa		18.93	■□□□□ 0.62
CACNA1A-238	ENST00000637276	KIF4B	Q2VIQ3	1234 aa		18.93	■□□□□ 0.62
CACNA1A-238	ENST00000637276	PRAM1	Q96QH2	718 aa		18.93	■□□□□ 0.62
CACNA1A-238	ENST00000637276	JAG2	Q9Y219	1238 aa		18.93	■□□□□ 0.62
CACNA1A-238	ENST00000637276	PKD2L1	Q9P0L9	805 aa		18.93	■□□□□ 0.62
CACNA1A-238	ENST00000637276	FKBP15	Q5T1M5	1219 aa		18.92	■□□□□ 0.62
CACNA1A-238	ENST00000637276	CBFA2T2	O43439	604 aa		18.92	■□□□□ 0.62
CACNA1A-238	ENST00000637276	MBD3	O95983	291 aa		18.92	■□□□□ 0.62
CACNA1A-238	ENST00000637276	IQCE	Q6IPM2	695 aa		18.92	■□□□□ 0.62
CACNA1A-238	ENST00000637276	CCDC175	P0C221	793 aa		18.92	■□□□□ 0.62
CACNA1A-238	ENST00000637276	IDE	P14735	1019 aa		18.92	■□□□□ 0.62
CACNA1A-238	ENST00000637276	KRT85	P78386	507 aa		18.92	■□□□□ 0.62
CACNA1A-238	ENST00000637276	GIGYF2	Q6Y7W6	1299 aa	Known RBP	18.92	■□□□□ 0.62
CACNA1A-238	ENST00000637276	CAVIN4	Q5BKX8	364 aa		18.92	■□□□□ 0.62
CACNA1A-238	ENST00000637276	CFAP70	Q5T0N1	1121 aa		18.91	■□□□□ 0.62
CACNA1A-238	ENST00000637276	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	18.91	■□□□□ 0.62
CACNA1A-238	ENST00000637276	ANKRD18B	A2A2Z9	1011 aa		18.91	■□□□□ 0.62
CACNA1A-238	ENST00000637276	GCOM1	H8Y6P7	765 aa	Predicted RBP	18.91	■□□□□ 0.62
CACNA1A-238	ENST00000637276	MYZAP	P0CAP1	466 aa		18.91	■□□□□ 0.62
CACNA1A-238	ENST00000637276	PHACTR2	O75167	634 aa		18.91	■□□□□ 0.62
CACNA1A-238	ENST00000637276	NUP62CL	Q9H1M0	184 aa		18.91	■□□□□ 0.62
CACNA1A-238	ENST00000637276	LRRC43	Q8N309	656 aa		18.91	■□□□□ 0.62
CACNA1A-238	ENST00000637276	ACSBG1	Q96GR2	724 aa		18.91	■□□□□ 0.62
CACNA1A-238	ENST00000637276	BLOC1S2	Q6QNY1	142 aa		18.9	■□□□□ 0.62
CACNA1A-238	ENST00000637276	GSTA5	Q7RTV2	222 aa		18.9	■□□□□ 0.62
CACNA1A-238	ENST00000637276	RAPGEF2	Q9Y4G8	1499 aa		18.9	■□□□□ 0.62
CACNA1A-238	ENST00000637276	MTIF2	P46199	727 aa	Known RBP	18.9	■□□□□ 0.62
CACNA1A-238	ENST00000637276	PPME1	Q9Y570	386 aa		18.9	■□□□□ 0.62
CACNA1A-238	ENST00000637276	GAS2L2	Q8NHY3	880 aa		18.9	■□□□□ 0.62
CACNA1A-238	ENST00000637276	NAP1L3	Q99457	506 aa	Predicted RBP	18.9	■□□□□ 0.62
CACNA1A-238	ENST00000637276	IKBKG	Q9Y6K9	419 aa		18.9	■□□□□ 0.62
CACNA1A-238	ENST00000637276	HAND2	P61296	217 aa		18.89	■□□□□ 0.62
CACNA1A-238	ENST00000637276	EEF2	P13639	858 aa	Known RBP	18.89	■□□□□ 0.61
CACNA1A-238	ENST00000637276	CCDC40	Q4G0X9	1142 aa		18.89	■□□□□ 0.61
CACNA1A-238	ENST00000637276	FSD2	A1L4K1	749 aa		18.89	■□□□□ 0.61
CACNA1A-238	ENST00000637276	CFAP57	Q96MR6	1250 aa		18.89	■□□□□ 0.61
CACNA1A-238	ENST00000637276	IMMT	Q16891	758 aa	Known RBP	18.89	■□□□□ 0.61
CACNA1A-238	ENST00000637276	GEN1	Q17RS7	908 aa		18.89	■□□□□ 0.61
CACNA1A-238	ENST00000637276	WIZ	O95785	1651 aa		18.89	■□□□□ 0.61
CACNA1A-238	ENST00000637276	MIA2	Q96PC5	1412 aa		18.89	■□□□□ 0.61
CACNA1A-238	ENST00000637276	CCDC8	Q9H0W5	538 aa	Predicted RBP	18.88	■□□□□ 0.61
CACNA1A-238	ENST00000637276	HGS	O14964	777 aa	Predicted RBP	18.88	■□□□□ 0.61
CACNA1A-238	ENST00000637276	TTC30B	Q8N4P2	665 aa		18.88	■□□□□ 0.61
CACNA1A-238	ENST00000637276	GABPA	Q06546	454 aa		18.88	■□□□□ 0.61
CACNA1A-238	ENST00000637276	HARS	P12081	509 aa	Known RBP	18.88	■□□□□ 0.61
CACNA1A-238	ENST00000637276	FOXD4	Q12950	439 aa	Predicted RBP	18.88	■□□□□ 0.61
CACNA1A-238	ENST00000637276	SLC12A5	Q9H2X9	1139 aa		18.88	■□□□□ 0.61
CACNA1A-238	ENST00000637276	VEZT	Q9HBM0	779 aa		18.88	■□□□□ 0.61
CACNA1A-238	ENST00000637276	SPG7	Q9UQ90	795 aa		18.88	■□□□□ 0.61
CACNA1A-238	ENST00000637276	MYC	P01106	439 aa	Predicted RBP	18.88	■□□□□ 0.61
CACNA1A-238	ENST00000637276	CCDC50	Q8IVM0	306 aa		18.88	■□□□□ 0.61
CACNA1A-238	ENST00000637276	PRKG1	Q13976	671 aa		18.87	■□□□□ 0.61
CACNA1A-238	ENST00000637276	KSR1	Q8IVT5	923 aa		18.87	■□□□□ 0.61
CACNA1A-238	ENST00000637276	SPATA17	Q96L03	361 aa		18.87	■□□□□ 0.61
CACNA1A-238	ENST00000637276	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	18.87	■□□□□ 0.61
CACNA1A-238	ENST00000637276	SEPT14	Q6ZU15	432 aa		18.87	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms