RNA–Protein interactions for RNA: ENST00000631619.1

CCNL1-226, Transcript of cyclin L1, humanhuman

TSL 5

Gene CCNL1, Length 2,457 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-226ENST00000631619 UQCRHLA0A096LP55 91 aa21.76■■□□□ 1.07
CCNL1-226ENST00000631619 UQCRHP07919 91 aa21.76■■□□□ 1.07
CCNL1-226ENST00000631619 CSPP1Q1MSJ5 1256 aa21.76■■□□□ 1.07
CCNL1-226ENST00000631619 SSH3Q8TE77 659 aa21.76■■□□□ 1.07
CCNL1-226ENST00000631619 MCM5P33992 734 aa21.75■■□□□ 1.07
CCNL1-226ENST00000631619 C14orf37Q86TY3 774 aa21.75■■□□□ 1.07
CCNL1-226ENST00000631619 TMX3Q96JJ7 454 aa21.75■■□□□ 1.07
CCNL1-226ENST00000631619 SRCIN1Q9C0H9 1055 aa21.75■■□□□ 1.07
CCNL1-226ENST00000631619 ZKSCAN5Q9Y2L8 839 aa21.75■■□□□ 1.07
CCNL1-226ENST00000631619 NCLP19338 710 aaKnown RBP21.74■■□□□ 1.07
CCNL1-226ENST00000631619 XPCQ01831 940 aaPredicted RBP21.74■■□□□ 1.07
CCNL1-226ENST00000631619 IL1RAPL2Q9NP60 686 aa21.74■■□□□ 1.07
CCNL1-226ENST00000631619 ANO2Q9NQ90 1003 aa21.74■■□□□ 1.07
CCNL1-226ENST00000631619 DYNC1I1O14576 645 aa21.73■■□□□ 1.07
CCNL1-226ENST00000631619 MED1Q15648 1581 aaPredicted RBP21.73■■□□□ 1.07
CCNL1-226ENST00000631619 NBPF6Q5VWK0 638 aa21.73■■□□□ 1.07
CCNL1-226ENST00000631619 IP6K1Q92551 441 aa21.73■■□□□ 1.07
CCNL1-226ENST00000631619 NBPF4Q96M43 638 aa21.73■■□□□ 1.07
CCNL1-226ENST00000631619 PHF8Q9UPP1 1060 aa21.73■■□□□ 1.07
CCNL1-226ENST00000631619 AOX1Q06278 1338 aa21.73■■□□□ 1.07
CCNL1-226ENST00000631619 LGR6Q9HBX8 967 aa21.72■■□□□ 1.07
CCNL1-226ENST00000631619 PRIM1P49642 420 aaKnown RBP21.72■■□□□ 1.07
CCNL1-226ENST00000631619 ANAPC15P60006 121 aa21.72■■□□□ 1.07
CCNL1-226ENST00000631619 EIF4A1P60842 406 aaKnown RBP21.72■■□□□ 1.07
CCNL1-226ENST00000631619 PPP1R42Q7Z4L9 355 aa21.72■■□□□ 1.07
CCNL1-226ENST00000631619 CHAMP1Q96JM3 812 aa21.72■■□□□ 1.07
CCNL1-226ENST00000631619 IL25Q9H293 177 aa21.72■■□□□ 1.07
CCNL1-226ENST00000631619 NFAT5O94916 1531 aa21.72■■□□□ 1.07
CCNL1-226ENST00000631619 EIF2S2P20042 333 aaKnown RBP21.71■■□□□ 1.07
CCNL1-226ENST00000631619 MCCP23508 829 aa21.71■■□□□ 1.07
CCNL1-226ENST00000631619 POLA2Q14181 598 aa21.71■■□□□ 1.07
CCNL1-226ENST00000631619 PRPF40AO75400 957 aaKnown RBP21.71■■□□□ 1.07
CCNL1-226ENST00000631619 MCM2P49736 904 aa21.71■■□□□ 1.07
CCNL1-226ENST00000631619 NUTM1Q86Y26 1132 aa21.71■■□□□ 1.07
CCNL1-226ENST00000631619 KDM3BQ7LBC6 1761 aa21.71■■□□□ 1.07
CCNL1-226ENST00000631619 CUL4AQ13619 759 aa21.7■■□□□ 1.06
CCNL1-226ENST00000631619 IL17RAQ96F46 866 aa21.7■■□□□ 1.06
CCNL1-226ENST00000631619 RGPD2P0DJD1 1756 aa21.7■■□□□ 1.06
CCNL1-226ENST00000631619 GPT2Q8TD30 523 aa21.7■■□□□ 1.06
CCNL1-226ENST00000631619 SURF6O75683 361 aaKnown RBP21.69■■□□□ 1.06
CCNL1-226ENST00000631619 NBPF7P0C2Y1 421 aaPredicted RBP21.69■■□□□ 1.06
CCNL1-226ENST00000631619 SMAP1Q8IYB5 467 aaPredicted RBP21.69■■□□□ 1.06
CCNL1-226ENST00000631619 CHPF2Q9P2E5 772 aa21.69■■□□□ 1.06
CCNL1-226ENST00000631619 KCNQ3O43525 872 aa21.68■■□□□ 1.06
CCNL1-226ENST00000631619 RAB11FIP3O75154 756 aa21.68■■□□□ 1.06
CCNL1-226ENST00000631619 CCDC39Q9UFE4 941 aa21.68■■□□□ 1.06
CCNL1-226ENST00000631619 CHD2O14647 1828 aaKnown RBP21.68■■□□□ 1.06
CCNL1-226ENST00000631619 SASS6Q6UVJ0 657 aa21.68■■□□□ 1.06
CCNL1-226ENST00000631619 RHPN1Q8TCX5 695 aa21.68■■□□□ 1.06
CCNL1-226ENST00000631619 RBM33Q96EV2 1170 aaKnown RBP21.68■■□□□ 1.06
CCNL1-226ENST00000631619 BEND3Q5T5X7 828 aa21.67■■□□□ 1.06
CCNL1-226ENST00000631619 PI4K2BQ8TCG2 481 aa21.67■■□□□ 1.06
CCNL1-226ENST00000631619 PI4KAP2A4QPH2 592 aa21.67■■□□□ 1.06
CCNL1-226ENST00000631619 SRGAP3O43295 1099 aa21.67■■□□□ 1.06
CCNL1-226ENST00000631619 HOXB7P09629 217 aa21.67■■□□□ 1.06
CCNL1-226ENST00000631619 FOXD4L5Q5VV16 416 aaPredicted RBP21.67■■□□□ 1.06
CCNL1-226ENST00000631619 PI4KAP1Q8N8J0 262 aa21.67■■□□□ 1.06
CCNL1-226ENST00000631619 FOXD4L4Q8WXT5 416 aaPredicted RBP21.67■■□□□ 1.06
CCNL1-226ENST00000631619 UPF3BQ9BZI7 483 aaKnown RBP21.67■■□□□ 1.06
CCNL1-226ENST00000631619 LRSAM1Q6UWE0 723 aa21.66■■□□□ 1.06
CCNL1-226ENST00000631619 NOL8Q76FK4 1167 aaKnown RBP21.66■■□□□ 1.06
CCNL1-226ENST00000631619 BRD1O95696 1058 aa21.66■■□□□ 1.06
CCNL1-226ENST00000631619 DNAAF4Q8WXU2 420 aa21.66■■□□□ 1.06
CCNL1-226ENST00000631619 LMO7Q8WWI1 1683 aa21.65■■□□□ 1.06
CCNL1-226ENST00000631619 MAP4K4O95819 1239 aaPredicted RBP21.65■■□□□ 1.06
CCNL1-226ENST00000631619 INTS4Q96HW7 963 aaKnown RBP21.65■■□□□ 1.06
CCNL1-226ENST00000631619 RBM27Q9P2N5 1060 aaKnown RBP21.65■■□□□ 1.06
CCNL1-226ENST00000631619 ANXA1P04083 346 aa21.65■■□□□ 1.06
CCNL1-226ENST00000631619 HSPA4P34932 840 aa21.64■■□□□ 1.05
CCNL1-226ENST00000631619 LRRC59Q96AG4 307 aaKnown RBP21.64■■□□□ 1.05
CCNL1-226ENST00000631619 EPB41L2O43491 1005 aaKnown RBP21.64■■□□□ 1.05
CCNL1-226ENST00000631619 KIF1BPQ96EK5 621 aa21.64■■□□□ 1.05
CCNL1-226ENST00000631619 NSFL1CQ9UNZ2 370 aaKnown RBP21.64■■□□□ 1.05
CCNL1-226ENST00000631619 ADCY9O60503 1353 aa21.63■■□□□ 1.05
CCNL1-226ENST00000631619 ZBTB7CA1YPR0 619 aa21.63■■□□□ 1.05
CCNL1-226ENST00000631619 ZNF530Q6P9A1 599 aaPredicted RBP21.62■■□□□ 1.05
CCNL1-226ENST00000631619 TMEM63CQ9P1W3 806 aa21.62■■□□□ 1.05
CCNL1-226ENST00000631619 PHRF1Q9P1Y6 1649 aaKnown RBP21.62■■□□□ 1.05
CCNL1-226ENST00000631619 BTBD11A6QL63 1104 aa21.62■■□□□ 1.05
CCNL1-226ENST00000631619 TEFQ10587 303 aa21.62■■□□□ 1.05
CCNL1-226ENST00000631619 AKAP4Q5JQC9 854 aa21.62■■□□□ 1.05
CCNL1-226ENST00000631619 MPRIPQ6WCQ1 1025 aa21.62■■□□□ 1.05
CCNL1-226ENST00000631619 SGSM2O43147 1006 aa21.61■■□□□ 1.05
CCNL1-226ENST00000631619 PSME1Q06323 249 aa21.61■■□□□ 1.05
CCNL1-226ENST00000631619 ESCO1Q5FWF5 840 aa21.61■■□□□ 1.05
CCNL1-226ENST00000631619 KCNH5Q8NCM2 988 aa21.61■■□□□ 1.05
CCNL1-226ENST00000631619 SYCE3A1L190 88 aa21.6■■□□□ 1.05
CCNL1-226ENST00000631619 RAD50Q92878 1312 aa21.6■■□□□ 1.05
CCNL1-226ENST00000631619 CRYBG1Q9Y4K1 1723 aa21.59■■□□□ 1.05
CCNL1-226ENST00000631619 CHMP4AQ9BY43 222 aa21.59■■□□□ 1.05
CCNL1-226ENST00000631619 PXDNQ92626 1479 aa21.59■■□□□ 1.05
CCNL1-226ENST00000631619 MBD3O95983 291 aa21.58■■□□□ 1.05
CCNL1-226ENST00000631619 PLEKHO1Q53GL0 409 aaPredicted RBP21.58■■□□□ 1.05
CCNL1-226ENST00000631619 CNTROBQ8N137 903 aa21.57■■□□□ 1.04
CCNL1-226ENST00000631619 LSG1Q9H089 658 aaKnown RBP21.57■■□□□ 1.04
CCNL1-226ENST00000631619 DBF4Q9UBU7 674 aaPredicted RBP21.57■■□□□ 1.04
CCNL1-226ENST00000631619 ADGRL3Q9HAR2 1447 aa21.57■■□□□ 1.04
CCNL1-226ENST00000631619 RNMTO43148 476 aaKnown RBP21.57■■□□□ 1.04
CCNL1-226ENST00000631619 HSP90AB4PQ58FF6 505 aa21.57■■□□□ 1.04
CCNL1-226ENST00000631619 USP42Q9H9J4 1324 aaKnown RBP21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms