RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 BRD3Q15059 726 aa4.59□□□□□ -1.67
R3HDM1-220ENST00000628915 SLC4A8Q2Y0W8 1093 aa4.59□□□□□ -1.67
R3HDM1-220ENST00000628915 HS1BP3Q53T59 392 aa4.59□□□□□ -1.67
R3HDM1-220ENST00000628915 BTN2A1Q7KYR7 527 aa4.59□□□□□ -1.67
R3HDM1-220ENST00000628915 ZNF396Q96N95 335 aaPredicted RBP4.59□□□□□ -1.67
R3HDM1-220ENST00000628915 CHPF2Q9P2E5 772 aa4.59□□□□□ -1.67
R3HDM1-220ENST00000628915 ITM2BQ9Y287 266 aa4.59□□□□□ -1.67
R3HDM1-220ENST00000628915 ZSCAN20P17040 1043 aaPredicted RBP4.59□□□□□ -1.68
R3HDM1-220ENST00000628915 NKX1-1Q15270 411 aaPredicted RBP4.59□□□□□ -1.68
R3HDM1-220ENST00000628915 CCDC184Q52MB2 194 aa4.59□□□□□ -1.68
R3HDM1-220ENST00000628915 KANK4Q5T7N3 995 aaPredicted RBP4.59□□□□□ -1.68
R3HDM1-220ENST00000628915 DCAF8Q5TAQ9 597 aa4.59□□□□□ -1.68
R3HDM1-220ENST00000628915 DDX12PQ92771 950 aa4.59□□□□□ -1.68
R3HDM1-220ENST00000628915 RMDN2Q96LZ7 410 aa4.59□□□□□ -1.68
R3HDM1-220ENST00000628915 MAF1Q9H063 256 aa4.59□□□□□ -1.68
R3HDM1-220ENST00000628915 UTP6Q9NYH9 597 aaKnown RBP4.59□□□□□ -1.68
R3HDM1-220ENST00000628915 RAD54L2Q9Y4B4 1467 aa4.59□□□□□ -1.68
R3HDM1-220ENST00000628915 KDM5CP41229 1560 aa4.59□□□□□ -1.68
R3HDM1-220ENST00000628915 NAT2P11245 290 aa4.58□□□□□ -1.68
R3HDM1-220ENST00000628915 TCF3P15923 654 aa4.58□□□□□ -1.68
R3HDM1-220ENST00000628915 BDNFP23560 247 aa4.58□□□□□ -1.68
R3HDM1-220ENST00000628915 MCM4P33991 863 aa4.58□□□□□ -1.68
R3HDM1-220ENST00000628915 CDR1P51861 262 aa4.58□□□□□ -1.68
R3HDM1-220ENST00000628915 RIPK4P57078 832 aa4.58□□□□□ -1.68
R3HDM1-220ENST00000628915 SKOR2Q2VWA4 1001 aaPredicted RBP4.58□□□□□ -1.68
R3HDM1-220ENST00000628915 FLCNQ8NFG4 579 aa4.58□□□□□ -1.68
R3HDM1-220ENST00000628915 ARPC5LQ9BPX5 153 aa4.58□□□□□ -1.68
R3HDM1-220ENST00000628915 PANK2Q9BZ23 570 aa4.58□□□□□ -1.68
R3HDM1-220ENST00000628915 UBAP1Q9NZ09 502 aa4.58□□□□□ -1.68
R3HDM1-220ENST00000628915 SFMBT1Q9UHJ3 866 aa4.58□□□□□ -1.68
R3HDM1-220ENST00000628915 CCDC194A0A1B0GVG4 234 aa4.58□□□□□ -1.68
R3HDM1-220ENST00000628915 KIAA0754O94854 1291 aa4.58□□□□□ -1.68
R3HDM1-220ENST00000628915 FOSL1P15407 271 aa4.58□□□□□ -1.68
R3HDM1-220ENST00000628915 NFXL1Q6ZNB6 911 aa4.58□□□□□ -1.68
R3HDM1-220ENST00000628915 RNF214Q8ND24 703 aa4.58□□□□□ -1.68
R3HDM1-220ENST00000628915 C17orf50Q8WW18 174 aa4.58□□□□□ -1.68
R3HDM1-220ENST00000628915 SPOCK2Q92563 424 aa4.58□□□□□ -1.68
R3HDM1-220ENST00000628915 UBXN4Q92575 508 aa4.58□□□□□ -1.68
R3HDM1-220ENST00000628915 SYAP1Q96A49 352 aaPredicted RBP4.58□□□□□ -1.68
R3HDM1-220ENST00000628915 RAPGEF6Q8TEU7 1601 aa4.58□□□□□ -1.68
R3HDM1-220ENST00000628915 MAP3K1Q13233 1512 aa4.58□□□□□ -1.68
R3HDM1-220ENST00000628915 RRM1P23921 792 aa4.58□□□□□ -1.68
R3HDM1-220ENST00000628915 RBBP5Q15291 538 aaKnown RBP4.58□□□□□ -1.68
R3HDM1-220ENST00000628915 DNAJC21Q5F1R6 531 aaKnown RBP4.58□□□□□ -1.68
R3HDM1-220ENST00000628915 LMBRD2Q68DH5 695 aaPredicted RBP4.58□□□□□ -1.68
R3HDM1-220ENST00000628915 JMYQ8N9B5 988 aa4.58□□□□□ -1.68
R3HDM1-220ENST00000628915 SGIP1Q9BQI5 828 aa4.58□□□□□ -1.68
R3HDM1-220ENST00000628915 MED4Q9NPJ6 270 aa4.58□□□□□ -1.68
R3HDM1-220ENST00000628915 V9GYY5 206 aaPredicted RBP4.58□□□□□ -1.68
R3HDM1-220ENST00000628915 ARHGEF40Q8TER5 1519 aa4.58□□□□□ -1.68
R3HDM1-220ENST00000628915 IQSEC2Q5JU85 1478 aa4.58□□□□□ -1.68
R3HDM1-220ENST00000628915 KIF27Q86VH2 1401 aa4.58□□□□□ -1.68
R3HDM1-220ENST00000628915 FER1L4A9Z1Z3 1794 aa4.58□□□□□ -1.68
R3HDM1-220ENST00000628915 EXOC5O00471 708 aa4.58□□□□□ -1.68
R3HDM1-220ENST00000628915 RWDD1Q9H446 243 aaPredicted RBP4.58□□□□□ -1.68
R3HDM1-220ENST00000628915 PAXBP1Q9Y5B6 917 aa4.58□□□□□ -1.68
R3HDM1-220ENST00000628915 EPRSP07814 1512 aaKnown RBP4.57□□□□□ -1.68
R3HDM1-220ENST00000628915 NEO1Q92859 1461 aa4.57□□□□□ -1.68
R3HDM1-220ENST00000628915 CCDC7Q96M83 1385 aa4.57□□□□□ -1.68
R3HDM1-220ENST00000628915 KDM6BO15054 1643 aa4.57□□□□□ -1.68
R3HDM1-220ENST00000628915 ECEL1O95672 775 aa4.57□□□□□ -1.68
R3HDM1-220ENST00000628915 CLEC4GQ6UXB4 293 aa4.57□□□□□ -1.68
R3HDM1-220ENST00000628915 CCDC65Q8IXS2 484 aa4.57□□□□□ -1.68
R3HDM1-220ENST00000628915 VMP1Q96GC9 406 aa4.57□□□□□ -1.68
R3HDM1-220ENST00000628915 CDCA7Q9BWT1 371 aaPredicted RBP4.57□□□□□ -1.68
R3HDM1-220ENST00000628915 FAM117AQ9C073 453 aa4.57□□□□□ -1.68
R3HDM1-220ENST00000628915 AMOTL2Q9Y2J4 779 aa4.57□□□□□ -1.68
R3HDM1-220ENST00000628915 TEX14Q8IWB6 1497 aa4.57□□□□□ -1.68
R3HDM1-220ENST00000628915 TTC37Q6PGP7 1564 aa4.57□□□□□ -1.68
R3HDM1-220ENST00000628915 HIP1RO75146 1068 aa4.57□□□□□ -1.68
R3HDM1-220ENST00000628915 FAM200BP0CF97 657 aa4.57□□□□□ -1.68
R3HDM1-220ENST00000628915 MCM5P33992 734 aa4.57□□□□□ -1.68
R3HDM1-220ENST00000628915 TOMM20Q15388 145 aa4.57□□□□□ -1.68
R3HDM1-220ENST00000628915 ZNF394Q53GI3 561 aa4.57□□□□□ -1.68
R3HDM1-220ENST00000628915 ARMC9Q7Z3E5 817 aa4.57□□□□□ -1.68
R3HDM1-220ENST00000628915 MAGI2Q86UL8 1455 aa4.57□□□□□ -1.68
R3HDM1-220ENST00000628915 NUBP1P53384 320 aa4.57□□□□□ -1.68
R3HDM1-220ENST00000628915 TRDNQ13061 729 aa4.57□□□□□ -1.68
R3HDM1-220ENST00000628915 UVSSAQ2YD98 709 aa4.57□□□□□ -1.68
R3HDM1-220ENST00000628915 C8orf34Q49A92 452 aa4.57□□□□□ -1.68
R3HDM1-220ENST00000628915 FAM114A1Q8IWE2 563 aa4.57□□□□□ -1.68
R3HDM1-220ENST00000628915 PRPF38AQ8NAV1 312 aaKnown RBP4.57□□□□□ -1.68
R3HDM1-220ENST00000628915 PHC3Q8NDX5 983 aa4.57□□□□□ -1.68
R3HDM1-220ENST00000628915 UHMK1Q8TAS1 419 aaKnown RBP4.57□□□□□ -1.68
R3HDM1-220ENST00000628915 ANKRD24Q8TF21 1146 aa4.57□□□□□ -1.68
R3HDM1-220ENST00000628915 TBC1D31Q96DN5 1066 aa4.57□□□□□ -1.68
R3HDM1-220ENST00000628915 RBM33Q96EV2 1170 aaKnown RBP4.57□□□□□ -1.68
R3HDM1-220ENST00000628915 CHMP5Q9NZZ3 219 aa4.57□□□□□ -1.68
R3HDM1-220ENST00000628915 MAST1Q9Y2H9 1570 aa4.57□□□□□ -1.68
R3HDM1-220ENST00000628915 ERBB4Q15303 1308 aa4.56□□□□□ -1.68
R3HDM1-220ENST00000628915 ITSN2Q9NZM3 1697 aa4.56□□□□□ -1.68
R3HDM1-220ENST00000628915 CCDC196A0A1B0GTZ2 297 aa4.56□□□□□ -1.68
R3HDM1-220ENST00000628915 PABPN1LA6NDY0 278 aaKnown RBP4.56□□□□□ -1.68
R3HDM1-220ENST00000628915 NEBLO76041 1014 aa4.56□□□□□ -1.68
R3HDM1-220ENST00000628915 USP8P40818 1118 aa4.56□□□□□ -1.68
R3HDM1-220ENST00000628915 APLP1P51693 650 aa4.56□□□□□ -1.68
R3HDM1-220ENST00000628915 ZSCAN26Q16670 478 aa4.56□□□□□ -1.68
R3HDM1-220ENST00000628915 KLHL10Q6JEL2 608 aa4.56□□□□□ -1.68
R3HDM1-220ENST00000628915 SASS6Q6UVJ0 657 aa4.56□□□□□ -1.68
R3HDM1-220ENST00000628915 BARGINQ6ZT62 677 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms