RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 KRT27Q7Z3Y8 459 aa8.9□□□□□ -0.98
TCF4-249ENST00000625716 CCDC125Q86Z20 511 aa8.9□□□□□ -0.98
TCF4-249ENST00000625716 USP35Q9P2H5 1018 aa8.9□□□□□ -0.98
TCF4-249ENST00000625716 SSH2Q76I76 1423 aa8.89□□□□□ -0.99
TCF4-249ENST00000625716 TESPA1A2RU30 521 aaPredicted RBP8.89□□□□□ -0.99
TCF4-249ENST00000625716 PPP1R18Q6NYC8 613 aa8.89□□□□□ -0.99
TCF4-249ENST00000625716 PHRF1Q9P1Y6 1649 aaKnown RBP8.89□□□□□ -0.99
TCF4-249ENST00000625716 GLI3P10071 1580 aa8.89□□□□□ -0.99
TCF4-249ENST00000625716 CRYBG1Q9Y4K1 1723 aa8.88□□□□□ -0.99
TCF4-249ENST00000625716 SPATA31A1Q5TZJ5 1347 aa8.88□□□□□ -0.99
TCF4-249ENST00000625716 CSB-PGBD3P0DP91 1061 aa8.88□□□□□ -0.99
TCF4-249ENST00000625716 LARP1Q6PKG0 1096 aaKnown RBP8.88□□□□□ -0.99
TCF4-249ENST00000625716 NME9Q86XW9 330 aa8.88□□□□□ -0.99
TCF4-249ENST00000625716 TMEM134Q9H6X4 195 aa8.88□□□□□ -0.99
TCF4-249ENST00000625716 EDC4Q6P2E9 1401 aaKnown RBP8.88□□□□□ -0.99
TCF4-249ENST00000625716 A0A1W2PP64 1363 aa8.87□□□□□ -0.99
TCF4-249ENST00000625716 AATKQ6ZMQ8 1374 aa8.87□□□□□ -0.99
TCF4-249ENST00000625716 NRKQ7Z2Y5 1582 aa8.87□□□□□ -0.99
TCF4-249ENST00000625716 RCCD1A6NED2 376 aa8.87□□□□□ -0.99
TCF4-249ENST00000625716 FCHSD2O94868 740 aa8.87□□□□□ -0.99
TCF4-249ENST00000625716 DNAJB2P25686 324 aa8.87□□□□□ -0.99
TCF4-249ENST00000625716 COPS2P61201 443 aa8.87□□□□□ -0.99
TCF4-249ENST00000625716 EIF4G2P78344 907 aaKnown RBP eCLIP8.87□□□□□ -0.992e-7■■■■■ 31.9
TCF4-249ENST00000625716 PDE3BQ13370 1112 aa8.87□□□□□ -0.99
TCF4-249ENST00000625716 RBM26Q5T8P6 1007 aaKnown RBP8.87□□□□□ -0.99
TCF4-249ENST00000625716 TOM1L2Q6ZVM7 507 aa8.87□□□□□ -0.99
TCF4-249ENST00000625716 TCP11L2Q8N4U5 519 aa8.87□□□□□ -0.99
TCF4-249ENST00000625716 POLR3GLQ9BT43 218 aa8.87□□□□□ -0.99
TCF4-249ENST00000625716 THRAP3Q9Y2W1 955 aaKnown RBP8.87□□□□□ -0.99
TCF4-249ENST00000625716 AKAP12Q02952 1782 aa8.86□□□□□ -0.99
TCF4-249ENST00000625716 SLIT3O75094 1523 aa8.86□□□□□ -0.99
TCF4-249ENST00000625716 NRAPQ86VF7 1730 aa8.86□□□□□ -0.99
TCF4-249ENST00000625716 BARGINQ6ZT62 677 aa8.86□□□□□ -0.99
TCF4-249ENST00000625716 ARHGEF25Q86VW2 580 aa8.86□□□□□ -0.99
TCF4-249ENST00000625716 RBM46Q8TBY0 533 aaKnown RBP8.86□□□□□ -0.99
TCF4-249ENST00000625716 COG3Q96JB2 828 aa8.86□□□□□ -0.99
TCF4-249ENST00000625716 USP31Q70CQ4 1352 aa8.86□□□□□ -0.99
TCF4-249ENST00000625716 PIK3C2AO00443 1686 aa8.85□□□□□ -0.99
TCF4-249ENST00000625716 CAMTA1Q9Y6Y1 1673 aa8.85□□□□□ -0.99
TCF4-249ENST00000625716 CD163L1Q9NR16 1453 aa8.85□□□□□ -0.99
TCF4-249ENST00000625716 CRB1P82279 1406 aa8.85□□□□□ -0.99
TCF4-249ENST00000625716 ANKRD36BQ8N2N9 1353 aa8.85□□□□□ -0.99
TCF4-249ENST00000625716 COL5A2P05997 1499 aaPredicted RBP8.84□□□□□ -0.99
TCF4-249ENST00000625716 GPR37O15354 613 aa8.84□□□□□ -0.99
TCF4-249ENST00000625716 SLC10A3P09131 477 aa8.84□□□□□ -0.99
TCF4-249ENST00000625716 FECHP22830 423 aa8.84□□□□□ -0.99
TCF4-249ENST00000625716 BLMP54132 1417 aaPredicted RBP8.84□□□□□ -0.99
TCF4-249ENST00000625716 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.84□□□□□ -0.99
TCF4-249ENST00000625716 WDR17Q8IZU2 1322 aa8.83□□□□□ -1
TCF4-249ENST00000625716 MON2Q7Z3U7 1717 aa8.83□□□□□ -1
TCF4-249ENST00000625716 HSPA5P11021 654 aaKnown RBP8.83□□□□□ -1
TCF4-249ENST00000625716 BAG6P46379 1132 aa8.83□□□□□ -1
TCF4-249ENST00000625716 FAM182BQ5T319 152 aa8.83□□□□□ -1
TCF4-249ENST00000625716 FAM196AQ6ZSG2 479 aa8.83□□□□□ -1
TCF4-249ENST00000625716 PXYLP1Q8TE99 480 aa8.83□□□□□ -1
TCF4-249ENST00000625716 NECTIN2Q92692 538 aa8.83□□□□□ -1
TCF4-249ENST00000625716 CDCA7Q9BWT1 371 aaPredicted RBP8.83□□□□□ -1
TCF4-249ENST00000625716 PRKD2Q9BZL6 878 aa8.83□□□□□ -1
TCF4-249ENST00000625716 LMO7Q8WWI1 1683 aa8.82□□□□□ -1
TCF4-249ENST00000625716 C11orf95C9JLR9 678 aaPredicted RBP8.82□□□□□ -1
TCF4-249ENST00000625716 LCE2BO14633 110 aa8.82□□□□□ -1
TCF4-249ENST00000625716 ZPR1O75312 459 aa8.82□□□□□ -1
TCF4-249ENST00000625716 AMPHP49418 695 aa8.82□□□□□ -1
TCF4-249ENST00000625716 DDB1Q16531 1140 aa8.82□□□□□ -1
TCF4-249ENST00000625716 BLOC1S3Q6QNY0 202 aa8.82□□□□□ -1
TCF4-249ENST00000625716 NLRP2Q9NX02 1062 aa8.82□□□□□ -1
TCF4-249ENST00000625716 ANKRD24Q8TF21 1146 aa8.81□□□□□ -1
TCF4-249ENST00000625716 CARD10Q9BWT7 1032 aa8.81□□□□□ -1
TCF4-249ENST00000625716 GGNBP2Q9H3C7 697 aa8.81□□□□□ -1
TCF4-249ENST00000625716 BRWD3Q6RI45 1802 aa8.81□□□□□ -1
TCF4-249ENST00000625716 NFAT5O94916 1531 aa8.8□□□□□ -1
TCF4-249ENST00000625716 EXOC5O00471 708 aa8.8□□□□□ -1
TCF4-249ENST00000625716 FYB1O15117 783 aa8.8□□□□□ -1
TCF4-249ENST00000625716 HIC1Q14526 733 aa8.8□□□□□ -1
TCF4-249ENST00000625716 DEFB132Q7Z7B7 95 aa8.8□□□□□ -1
TCF4-249ENST00000625716 IP6K1Q92551 441 aa8.8□□□□□ -1
TCF4-249ENST00000625716 LTV1Q96GA3 475 aaPredicted RBP8.8□□□□□ -1
TCF4-249ENST00000625716 PCDHB3Q9Y5E6 796 aa8.8□□□□□ -1
TCF4-249ENST00000625716 CCDC7Q96M83 1385 aa8.8□□□□□ -1
TCF4-249ENST00000625716 THSD7AQ9UPZ6 1657 aa8.8□□□□□ -1
TCF4-249ENST00000625716 OVOS2A0A0J9YW53 1432 aa8.8□□□□□ -1
TCF4-249ENST00000625716 OVOS2Q6IE36 1432 aa8.8□□□□□ -1
TCF4-249ENST00000625716 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.79□□□□□ -1
TCF4-249ENST00000625716 ACTN4O43707 911 aaKnown RBP8.79□□□□□ -1
TCF4-249ENST00000625716 TRIM37O94972 964 aa8.79□□□□□ -1
TCF4-249ENST00000625716 SLC4A3P48751 1232 aa8.79□□□□□ -1
TCF4-249ENST00000625716 ABCC6O95255 1503 aa8.79□□□□□ -1
TCF4-249ENST00000625716 CGNL1Q0VF96 1302 aa8.79□□□□□ -1
TCF4-249ENST00000625716 APBA3O96018 575 aa8.78□□□□□ -1
TCF4-249ENST00000625716 METTL3Q86U44 580 aaKnown RBP8.78□□□□□ -1
TCF4-249ENST00000625716 EMID1Q96A84 441 aaPredicted RBP8.78□□□□□ -1
TCF4-249ENST00000625716 CARD14Q9BXL6 1004 aa8.78□□□□□ -1
TCF4-249ENST00000625716 V9GY48 417 aaPredicted RBP8.78□□□□□ -1
TCF4-249ENST00000625716 COL18A1P39060 1754 aa8.78□□□□□ -1
TCF4-249ENST00000625716 NSD3Q9BZ95 1437 aa8.78□□□□□ -1
TCF4-249ENST00000625716 MAP3K19Q56UN5 1328 aa8.78□□□□□ -1
TCF4-249ENST00000625716 OATP04181 439 aa8.77□□□□□ -1.01
TCF4-249ENST00000625716 CFHP08603 1231 aa8.77□□□□□ -1.01
TCF4-249ENST00000625716 IL2RBP14784 551 aa8.77□□□□□ -1.01
TCF4-249ENST00000625716 FBLN1P23142 703 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms