RNA–Protein interactions for RNA: ENST00000612303.1

NEAT1-204, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 3 BASIC

Gene NEAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-204ENST00000612303 DDX21Q9NR30 783 aaKnown RBP eCLIP16.93■□□□□ 0.3
NEAT1-204ENST00000612303 HYPKQ9NX55 129 aa16.93■□□□□ 0.3
NEAT1-204ENST00000612303 C5P01031 1676 aa16.93■□□□□ 0.3
NEAT1-204ENST00000612303 A0A0G2JS52 829 aa16.92■□□□□ 0.3
NEAT1-204ENST00000612303 MYT1Q01538 1121 aa16.92■□□□□ 0.3
NEAT1-204ENST00000612303 INTS3Q68E01 1043 aaKnown RBP16.92■□□□□ 0.3
NEAT1-204ENST00000612303 CCDC136Q96JN2 1154 aa16.92■□□□□ 0.3
NEAT1-204ENST00000612303 CHPF2Q9P2E5 772 aa16.92■□□□□ 0.3
NEAT1-204ENST00000612303 ASAP1Q9ULH1 1129 aa16.92■□□□□ 0.3
NEAT1-204ENST00000612303 RGS12O14924 1447 aa16.91■□□□□ 0.3
NEAT1-204ENST00000612303 PRAMEF22A3QJZ6 481 aa16.91■□□□□ 0.3
NEAT1-204ENST00000612303 SEPT12Q8IYM1 358 aa16.91■□□□□ 0.3
NEAT1-204ENST00000612303 USP16Q9Y5T5 823 aa16.91■□□□□ 0.3
NEAT1-204ENST00000612303 ITPRIPQ8IWB1 547 aa16.9■□□□□ 0.3
NEAT1-204ENST00000612303 SYTL4Q96C24 671 aaPredicted RBP16.9■□□□□ 0.3
NEAT1-204ENST00000612303 PTCD1O75127 700 aaKnown RBP16.89■□□□□ 0.29
NEAT1-204ENST00000612303 RBM6P78332 1123 aaKnown RBP16.89■□□□□ 0.29
NEAT1-204ENST00000612303 FKBP5Q13451 457 aaPredicted RBP16.89■□□□□ 0.29
NEAT1-204ENST00000612303 PDIA6Q15084 440 aa16.89■□□□□ 0.29
NEAT1-204ENST00000612303 B4GALNT3Q6L9W6 998 aa16.89■□□□□ 0.29
NEAT1-204ENST00000612303 SMARCC1Q92922 1105 aaPredicted RBP16.89■□□□□ 0.29
NEAT1-204ENST00000612303 CCT4P50991 539 aaKnown RBP16.88■□□□□ 0.29
NEAT1-204ENST00000612303 PHAXQ9H814 394 aaKnown RBP16.88■□□□□ 0.29
NEAT1-204ENST00000612303 PXDNLA1KZ92 1463 aa16.87■□□□□ 0.29
NEAT1-204ENST00000612303 ZBTB7BO15156 539 aaPredicted RBP16.87■□□□□ 0.29
NEAT1-204ENST00000612303 ACSBG1Q96GR2 724 aa16.87■□□□□ 0.29
NEAT1-204ENST00000612303 ZBTB40Q9NUA8 1239 aa16.87■□□□□ 0.29
NEAT1-204ENST00000612303 STARD3NLO95772 234 aa16.86■□□□□ 0.29
NEAT1-204ENST00000612303 DDX58O95786 925 aaKnown RBP16.86■□□□□ 0.29
NEAT1-204ENST00000612303 PROSER3Q2NL68 480 aa16.86■□□□□ 0.29
NEAT1-204ENST00000612303 N4BP2Q86UW6 1770 aaPredicted RBP16.86■□□□□ 0.29
NEAT1-204ENST00000612303 KSR2Q6VAB6 950 aa16.85■□□□□ 0.29
NEAT1-204ENST00000612303 LRP10Q7Z4F1 713 aa16.85■□□□□ 0.29
NEAT1-204ENST00000612303 RBM42Q9BTD8 480 aaKnown RBP16.85■□□□□ 0.29
NEAT1-204ENST00000612303 NHSQ6T4R5 1651 aa16.85■□□□□ 0.29
NEAT1-204ENST00000612303 SBF2Q86WG5 1849 aa16.84■□□□□ 0.29
NEAT1-204ENST00000612303 F6X3S4 739 aa16.84■□□□□ 0.29
NEAT1-204ENST00000612303 ANXA1P04083 346 aa16.84■□□□□ 0.29
NEAT1-204ENST00000612303 CICQ96RK0 1608 aaPredicted RBP16.84■□□□□ 0.29
NEAT1-204ENST00000612303 ZNF831Q5JPB2 1677 aa16.84■□□□□ 0.29
NEAT1-204ENST00000612303 KCNQ2O43526 872 aa16.83■□□□□ 0.28
NEAT1-204ENST00000612303 DNAJC10Q8IXB1 793 aa16.83■□□□□ 0.28
NEAT1-204ENST00000612303 DNAAF4Q8WXU2 420 aa16.83■□□□□ 0.28
NEAT1-204ENST00000612303 BRWD3Q6RI45 1802 aa16.82■□□□□ 0.28
NEAT1-204ENST00000612303 ATP10DQ9P241 1426 aa16.82■□□□□ 0.28
NEAT1-204ENST00000612303 PI4KAP2A4QPH2 592 aa16.82■□□□□ 0.28
NEAT1-204ENST00000612303 NBPF26B4DH59 902 aa16.82■□□□□ 0.28
NEAT1-204ENST00000612303 NBPF14Q5TI25 921 aa16.82■□□□□ 0.28
NEAT1-204ENST00000612303 NBPF10Q6P3W6 841 aaKnown RBP16.82■□□□□ 0.28
NEAT1-204ENST00000612303 SLC4A10Q6U841 1118 aa16.82■□□□□ 0.28
NEAT1-204ENST00000612303 FAM196AQ6ZSG2 479 aa16.82■□□□□ 0.28
NEAT1-204ENST00000612303 COPS6Q7L5N1 327 aa16.82■□□□□ 0.28
NEAT1-204ENST00000612303 KRT27Q7Z3Y8 459 aa16.82■□□□□ 0.28
NEAT1-204ENST00000612303 NBPF15Q8N660 670 aa16.82■□□□□ 0.28
NEAT1-204ENST00000612303 PI4KAP1Q8N8J0 262 aa16.82■□□□□ 0.28
NEAT1-204ENST00000612303 SLC4A9Q96Q91 983 aa16.82■□□□□ 0.28
NEAT1-204ENST00000612303 ADCY9O60503 1353 aa16.81■□□□□ 0.28
NEAT1-204ENST00000612303 PALLDQ8WX93 1383 aa16.81■□□□□ 0.28
NEAT1-204ENST00000612303 IBTKQ9P2D0 1353 aaPredicted RBP16.81■□□□□ 0.28
NEAT1-204ENST00000612303 LOC102724428A0A0B4J2F2 783 aa16.81■□□□□ 0.28
NEAT1-204ENST00000612303 A1BGP04217 495 aa16.81■□□□□ 0.28
NEAT1-204ENST00000612303 CYP19A1P11511 503 aaPredicted RBP16.81■□□□□ 0.28
NEAT1-204ENST00000612303 MYL6BP14649 208 aa16.81■□□□□ 0.28
NEAT1-204ENST00000612303 RXRBP28702 533 aa16.81■□□□□ 0.28
NEAT1-204ENST00000612303 SIK1P57059 783 aa16.81■□□□□ 0.28
NEAT1-204ENST00000612303 XAGE3Q8WTP9 111 aa16.81■□□□□ 0.28
NEAT1-204ENST00000612303 PCDHB15Q9Y5E8 787 aa16.81■□□□□ 0.28
NEAT1-204ENST00000612303 TJP1Q07157 1748 aa16.8■□□□□ 0.28
NEAT1-204ENST00000612303 ALDH1L1O75891 902 aa16.8■□□□□ 0.28
NEAT1-204ENST00000612303 ANKRD13DQ6ZTN6 518 aa16.8■□□□□ 0.28
NEAT1-204ENST00000612303 CENPQQ7L2Z9 268 aaPredicted RBP16.8■□□□□ 0.28
NEAT1-204ENST00000612303 BTAF1O14981 1849 aa16.8■□□□□ 0.28
NEAT1-204ENST00000612303 KDM2BQ8NHM5 1336 aa16.79■□□□□ 0.28
NEAT1-204ENST00000612303 BEND3Q5T5X7 828 aa16.79■□□□□ 0.28
NEAT1-204ENST00000612303 PLBD2Q8NHP8 589 aa16.79■□□□□ 0.28
NEAT1-204ENST00000612303 SRCIN1Q9C0H9 1055 aa16.79■□□□□ 0.28
NEAT1-204ENST00000612303 BCL11BQ9C0K0 894 aaPredicted RBP16.79■□□□□ 0.28
NEAT1-204ENST00000612303 RWDD1Q9H446 243 aaPredicted RBP16.79■□□□□ 0.28
NEAT1-204ENST00000612303 MAP3K2Q9Y2U5 619 aa16.79■□□□□ 0.28
NEAT1-204ENST00000612303 GNAI3P08754 354 aa16.78■□□□□ 0.28
NEAT1-204ENST00000612303 ATP6V1AP38606 617 aa16.78■□□□□ 0.28
NEAT1-204ENST00000612303 AIMP1Q12904 312 aaKnown RBP16.78■□□□□ 0.28
NEAT1-204ENST00000612303 RIC3Q7Z5B4 369 aa16.78■□□□□ 0.28
NEAT1-204ENST00000612303 HDAC1Q13547 482 aaPredicted RBP16.77■□□□□ 0.28
NEAT1-204ENST00000612303 LINS1Q8NG48 757 aa16.77■□□□□ 0.28
NEAT1-204ENST00000612303 METTL22Q9BUU2 404 aaPredicted RBP16.77■□□□□ 0.28
NEAT1-204ENST00000612303 RGS17Q9UGC6 210 aaPredicted RBP16.77■□□□□ 0.28
NEAT1-204ENST00000612303 IL6STP40189 918 aaPredicted RBP16.76■□□□□ 0.27
NEAT1-204ENST00000612303 NEXNQ0ZGT2 675 aa16.76■□□□□ 0.27
NEAT1-204ENST00000612303 FAM182BQ5T319 152 aa16.76■□□□□ 0.27
NEAT1-204ENST00000612303 PELP1Q8IZL8 1130 aaKnown RBP16.76■□□□□ 0.27
NEAT1-204ENST00000612303 HDAC5Q9UQL6 1122 aa16.76■□□□□ 0.27
NEAT1-204ENST00000612303 RREB1Q92766 1687 aa16.75■□□□□ 0.27
NEAT1-204ENST00000612303 PIP4K2AP48426 406 aaPredicted RBP16.75■□□□□ 0.27
NEAT1-204ENST00000612303 RPAP2Q8IXW5 612 aaPredicted RBP16.75■□□□□ 0.27
NEAT1-204ENST00000612303 MEIS3Q99687 375 aa16.75■□□□□ 0.27
NEAT1-204ENST00000612303 USP44Q9H0E7 712 aa16.75■□□□□ 0.27
NEAT1-204ENST00000612303 LY75O60449 1722 aa16.74■□□□□ 0.27
NEAT1-204ENST00000612303 IGHDP01880 384 aa16.74■□□□□ 0.27
NEAT1-204ENST00000612303 GNAI2P04899 355 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 180.7 ms