RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 IFNL2Q8IZJ0 200 aa13.07□□□□□ -0.32
CTCFL-220ENST00000608858 ERFEQ4G0M1 354 aa13.06□□□□□ -0.32
CTCFL-220ENST00000608858 TTLL6Q8N841 843 aa13.06□□□□□ -0.32
CTCFL-220ENST00000608858 EMILIN1Q9Y6C2 1016 aa13.06□□□□□ -0.32
CTCFL-220ENST00000608858 TMEM88BA6NKF7 163 aa13.05□□□□□ -0.32
CTCFL-220ENST00000608858 CRKLP46109 303 aaKnown RBP13.05□□□□□ -0.32
CTCFL-220ENST00000608858 RGS19P49795 217 aa13.05□□□□□ -0.32
CTCFL-220ENST00000608858 USPL1Q5W0Q7 1092 aa13.05□□□□□ -0.32
CTCFL-220ENST00000608858 C2CD5Q86YS7 1000 aa13.05□□□□□ -0.32
CTCFL-220ENST00000608858 TSKSQ9UJT2 592 aa13.05□□□□□ -0.32
CTCFL-220ENST00000608858 CLEC11AQ9Y240 323 aa13.05□□□□□ -0.32
CTCFL-220ENST00000608858 ZC3H4Q9UPT8 1303 aaKnown RBP13.05□□□□□ -0.32
CTCFL-220ENST00000608858 INSRP06213 1382 aa13.05□□□□□ -0.32
CTCFL-220ENST00000608858 C21orf2O43822 256 aa13.04□□□□□ -0.32
CTCFL-220ENST00000608858 GRM1Q13255 1194 aa13.04□□□□□ -0.32
CTCFL-220ENST00000608858 DEFB115Q30KQ5 88 aa13.04□□□□□ -0.32
CTCFL-220ENST00000608858 EAPPQ56P03 285 aaPredicted RBP13.04□□□□□ -0.32
CTCFL-220ENST00000608858 ZNF622Q969S3 477 aaKnown RBP eCLIP13.04□□□□□ -0.323e-23■□□□□ 9.7
CTCFL-220ENST00000608858 CNTNAP4Q9C0A0 1308 aa13.04□□□□□ -0.32
CTCFL-220ENST00000608858 ABCB7O75027 752 aa13.03□□□□□ -0.32
CTCFL-220ENST00000608858 ZPR1O75312 459 aa13.03□□□□□ -0.32
CTCFL-220ENST00000608858 CCDC24Q8N4L8 307 aa13.03□□□□□ -0.32
CTCFL-220ENST00000608858 EYA1Q99502 592 aa13.03□□□□□ -0.32
CTCFL-220ENST00000608858 USP42Q9H9J4 1324 aaKnown RBP13.03□□□□□ -0.32
CTCFL-220ENST00000608858 RTL1A6NKG5 1358 aa13.03□□□□□ -0.32
CTCFL-220ENST00000608858 KDM6AO15550 1401 aaPredicted RBP13.03□□□□□ -0.32
CTCFL-220ENST00000608858 MYH14Q7Z406 1995 aaKnown RBP13.02□□□□□ -0.32
CTCFL-220ENST00000608858 H0YIN7 160 aa13.02□□□□□ -0.33
CTCFL-220ENST00000608858 ITGBL1O95965 494 aaPredicted RBP13.02□□□□□ -0.33
CTCFL-220ENST00000608858 PASKQ96RG2 1323 aa13.02□□□□□ -0.33
CTCFL-220ENST00000608858 SERPINB2P05120 415 aa13.01□□□□□ -0.33
CTCFL-220ENST00000608858 CABP4P57796 275 aa13.01□□□□□ -0.33
CTCFL-220ENST00000608858 NFIXQ14938 502 aa13.01□□□□□ -0.33
CTCFL-220ENST00000608858 INTS5Q6P9B9 1019 aaKnown RBP13.01□□□□□ -0.33
CTCFL-220ENST00000608858 BICDL1Q6ZP65 573 aa13.01□□□□□ -0.33
CTCFL-220ENST00000608858 WDR33Q9C0J8 1336 aaKnown RBP13.01□□□□□ -0.33
CTCFL-220ENST00000608858 KDRP35968 1356 aa13□□□□□ -0.33
CTCFL-220ENST00000608858 MAP2K1Q02750 393 aaPredicted RBP13□□□□□ -0.33
CTCFL-220ENST00000608858 PAXIP1Q6ZW49 1069 aaPredicted RBP13□□□□□ -0.33
CTCFL-220ENST00000608858 ABT1Q9ULW3 272 aaKnown RBP13□□□□□ -0.33
CTCFL-220ENST00000608858 FLT4P35916 1363 aa12.99□□□□□ -0.33
CTCFL-220ENST00000608858 ERVV-2B6SEH9 535 aa12.99□□□□□ -0.33
CTCFL-220ENST00000608858 MAP1SQ66K74 1059 aaPredicted RBP12.99□□□□□ -0.33
CTCFL-220ENST00000608858 NFATC2IPQ8NCF5 419 aa12.99□□□□□ -0.33
CTCFL-220ENST00000608858 TAF1DQ9H5J8 278 aaPredicted RBP12.99□□□□□ -0.33
CTCFL-220ENST00000608858 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.99□□□□□ -0.33
CTCFL-220ENST00000608858 FMR1Q06787 632 aaKnown RBP eCLIP12.98□□□□□ -0.339e-8■■□□□ 14.3
CTCFL-220ENST00000608858 LDHDQ86WU2 507 aa12.98□□□□□ -0.33
CTCFL-220ENST00000608858 TIAM2Q8IVF5 1701 aa12.97□□□□□ -0.33
CTCFL-220ENST00000608858 ST20-MTHFSA0A0A6YYL1 179 aa12.97□□□□□ -0.33
CTCFL-220ENST00000608858 CNTROBQ8N137 903 aa12.97□□□□□ -0.33
CTCFL-220ENST00000608858 PUS7Q96PZ0 661 aaKnown RBP12.97□□□□□ -0.33
CTCFL-220ENST00000608858 BEGAINQ9BUH8 593 aa12.97□□□□□ -0.33
CTCFL-220ENST00000608858 TNRC18O15417 2968 aaPredicted RBP12.96□□□□□ -0.33
CTCFL-220ENST00000608858 DNAJC10Q8IXB1 793 aa12.96□□□□□ -0.33
CTCFL-220ENST00000608858 MCOLN1Q9GZU1 580 aa12.96□□□□□ -0.33
CTCFL-220ENST00000608858 VIRMAQ69YN4 1812 aaKnown RBP12.96□□□□□ -0.33
CTCFL-220ENST00000608858 RASSF10A6NK89 507 aa12.95□□□□□ -0.34
CTCFL-220ENST00000608858 MTHFSP49914 203 aa12.95□□□□□ -0.34
CTCFL-220ENST00000608858 CYP4F22Q6NT55 531 aa12.95□□□□□ -0.34
CTCFL-220ENST00000608858 BCL2L12Q9HB09 334 aa12.95□□□□□ -0.34
CTCFL-220ENST00000608858 CARMIL3Q8ND23 1372 aa12.94□□□□□ -0.34
CTCFL-220ENST00000608858 IQCA1LA6NCM1 817 aa12.94□□□□□ -0.34
CTCFL-220ENST00000608858 TNNT2P45379 298 aaPredicted RBP12.94□□□□□ -0.34
CTCFL-220ENST00000608858 GPR101Q96P66 508 aaPredicted RBP12.94□□□□□ -0.34
CTCFL-220ENST00000608858 TESK2Q96S53 571 aa12.94□□□□□ -0.34
CTCFL-220ENST00000608858 TONSLQ96HA7 1378 aa12.94□□□□□ -0.34
CTCFL-220ENST00000608858 COL5A3P25940 1745 aaPredicted RBP12.93□□□□□ -0.34
CTCFL-220ENST00000608858 AFDNP55196 1824 aaKnown RBP12.93□□□□□ -0.34
CTCFL-220ENST00000608858 AOC2O75106 756 aa12.93□□□□□ -0.34
CTCFL-220ENST00000608858 ZNF530Q6P9A1 599 aaPredicted RBP12.93□□□□□ -0.34
CTCFL-220ENST00000608858 CAPNS2Q96L46 248 aa12.93□□□□□ -0.34
CTCFL-220ENST00000608858 TAOK3Q9H2K8 898 aa12.93□□□□□ -0.34
CTCFL-220ENST00000608858 NARFQ9UHQ1 456 aa12.93□□□□□ -0.34
CTCFL-220ENST00000608858 WASHC2AQ641Q2 1341 aa12.92□□□□□ -0.34
CTCFL-220ENST00000608858 CANXP27824 592 aaKnown RBP12.92□□□□□ -0.34
CTCFL-220ENST00000608858 EPHX2P34913 555 aa12.92□□□□□ -0.34
CTCFL-220ENST00000608858 DGKZQ13574 1117 aa12.92□□□□□ -0.34
CTCFL-220ENST00000608858 PLEKHO1Q53GL0 409 aaPredicted RBP12.92□□□□□ -0.34
CTCFL-220ENST00000608858 CARD14Q9BXL6 1004 aa12.92□□□□□ -0.34
CTCFL-220ENST00000608858 HACL1Q9UJ83 578 aa12.92□□□□□ -0.34
CTCFL-220ENST00000608858 HSP90AB1P08238 724 aaKnown RBP12.91□□□□□ -0.34
CTCFL-220ENST00000608858 EIF4A2Q14240 407 aaKnown RBP12.91□□□□□ -0.34
CTCFL-220ENST00000608858 CASP8AP2Q9UKL3 1982 aa12.9□□□□□ -0.34
CTCFL-220ENST00000608858 SOS1Q07889 1333 aaPredicted RBP12.9□□□□□ -0.34
CTCFL-220ENST00000608858 CYP19A1P11511 503 aaPredicted RBP12.9□□□□□ -0.34
CTCFL-220ENST00000608858 SOX10P56693 466 aa12.9□□□□□ -0.34
CTCFL-220ENST00000608858 SLC39A6Q13433 755 aa12.9□□□□□ -0.34
CTCFL-220ENST00000608858 RNF123Q5XPI4 1314 aa12.89□□□□□ -0.35
CTCFL-220ENST00000608858 ZNF541Q9H0D2 1346 aa12.89□□□□□ -0.35
CTCFL-220ENST00000608858 ZBTB22O15209 634 aa12.89□□□□□ -0.35
CTCFL-220ENST00000608858 PDE6BP35913 854 aa12.89□□□□□ -0.35
CTCFL-220ENST00000608858 TBC1D9BQ66K14 1250 aa12.89□□□□□ -0.35
CTCFL-220ENST00000608858 OLFM4Q6UX06 510 aa12.89□□□□□ -0.35
CTCFL-220ENST00000608858 DDX21Q9NR30 783 aaKnown RBP eCLIP12.89□□□□□ -0.35
CTCFL-220ENST00000608858 ZNF277Q9NRM2 450 aaPredicted RBP12.89□□□□□ -0.35
CTCFL-220ENST00000608858 POLKQ9UBT6 870 aa12.89□□□□□ -0.35
CTCFL-220ENST00000608858 ZBTB1Q9Y2K1 713 aa12.89□□□□□ -0.35
CTCFL-220ENST00000608858 DICER1Q9UPY3 1922 aaKnown RBP12.89□□□□□ -0.35
CTCFL-220ENST00000608858 TRAF5O00463 557 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms