RNA–Protein interactions for RNA: ENST00000608107.1

ITGB5-211, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-211ENST00000608107 CACNA1FO60840 1977 aa13.24□□□□□ -0.29
ITGB5-211ENST00000608107 ANXA1P04083 346 aa13.24□□□□□ -0.29
ITGB5-211ENST00000608107 BAG6P46379 1132 aa13.24□□□□□ -0.29
ITGB5-211ENST00000608107 SMIM5Q71RC9 77 aa13.24□□□□□ -0.29
ITGB5-211ENST00000608107 CCDC125Q86Z20 511 aa13.24□□□□□ -0.29
ITGB5-211ENST00000608107 RREB1Q92766 1687 aa13.24□□□□□ -0.29
ITGB5-211ENST00000608107 C4BP0C0L5 1744 aa13.23□□□□□ -0.29
ITGB5-211ENST00000608107 NUP188Q5SRE5 1749 aa13.23□□□□□ -0.29
ITGB5-211ENST00000608107 PROSER3Q2NL68 480 aa13.23□□□□□ -0.29
ITGB5-211ENST00000608107 HDGFL1Q5TGJ6 251 aa13.23□□□□□ -0.29
ITGB5-211ENST00000608107 NBPF26B4DH59 902 aa13.22□□□□□ -0.29
ITGB5-211ENST00000608107 HOXB7P09629 217 aa13.22□□□□□ -0.29
ITGB5-211ENST00000608107 CRKLP46109 303 aaKnown RBP13.22□□□□□ -0.29
ITGB5-211ENST00000608107 SLC27A3Q5K4L6 730 aa13.22□□□□□ -0.29
ITGB5-211ENST00000608107 NBPF14Q5TI25 921 aa13.22□□□□□ -0.29
ITGB5-211ENST00000608107 NBPF10Q6P3W6 841 aaKnown RBP13.22□□□□□ -0.29
ITGB5-211ENST00000608107 INTS5Q6P9B9 1019 aaKnown RBP13.22□□□□□ -0.29
ITGB5-211ENST00000608107 NBPF15Q8N660 670 aa13.22□□□□□ -0.29
ITGB5-211ENST00000608107 BCL2L13Q9BXK5 485 aa13.22□□□□□ -0.29
ITGB5-211ENST00000608107 CHPF2Q9P2E5 772 aa13.22□□□□□ -0.29
ITGB5-211ENST00000608107 TUBGCP6Q96RT7 1819 aa13.22□□□□□ -0.29
ITGB5-211ENST00000608107 UBR3Q6ZT12 1888 aa13.21□□□□□ -0.29
ITGB5-211ENST00000608107 STARD3NLO95772 234 aa13.21□□□□□ -0.29
ITGB5-211ENST00000608107 RARSP54136 660 aaKnown RBP13.21□□□□□ -0.29
ITGB5-211ENST00000608107 PDIA6Q15084 440 aa13.21□□□□□ -0.29
ITGB5-211ENST00000608107 AMIGO3Q86WK7 504 aa13.21□□□□□ -0.29
ITGB5-211ENST00000608107 SSH1Q8WYL5 1049 aa13.21□□□□□ -0.29
ITGB5-211ENST00000608107 TEX13AQ9BXU3 409 aaPredicted RBP13.21□□□□□ -0.29
ITGB5-211ENST00000608107 ZBTB1Q9Y2K1 713 aa13.21□□□□□ -0.29
ITGB5-211ENST00000608107 SOS1Q07889 1333 aaPredicted RBP13.2□□□□□ -0.3
ITGB5-211ENST00000608107 BCAR3O75815 825 aa13.2□□□□□ -0.3
ITGB5-211ENST00000608107 MYL6BP14649 208 aa13.2□□□□□ -0.3
ITGB5-211ENST00000608107 CANXP27824 592 aaKnown RBP13.2□□□□□ -0.3
ITGB5-211ENST00000608107 CCDC30Q5VVM6 783 aa13.2□□□□□ -0.3
ITGB5-211ENST00000608107 G2E3Q7L622 706 aa13.2□□□□□ -0.3
ITGB5-211ENST00000608107 CCDC87Q9NVE4 849 aa13.2□□□□□ -0.3
ITGB5-211ENST00000608107 CT47B1P0C2W7 299 aaPredicted RBP13.19□□□□□ -0.3
ITGB5-211ENST00000608107 ZNF827Q17R98 1081 aa13.19□□□□□ -0.3
ITGB5-211ENST00000608107 LRP10Q7Z4F1 713 aa13.19□□□□□ -0.3
ITGB5-211ENST00000608107 ANO8Q9HCE9 1232 aaPredicted RBP13.19□□□□□ -0.3
ITGB5-211ENST00000608107 RCAN3Q9UKA8 241 aa13.19□□□□□ -0.3
ITGB5-211ENST00000608107 CNTNAP4Q9C0A0 1308 aa13.18□□□□□ -0.3
ITGB5-211ENST00000608107 SLC4A2P04920 1241 aa13.18□□□□□ -0.3
ITGB5-211ENST00000608107 RC3H1Q5TC82 1133 aaKnown RBP13.18□□□□□ -0.3
ITGB5-211ENST00000608107 MRPL50Q8N5N7 158 aaKnown RBP13.18□□□□□ -0.3
ITGB5-211ENST00000608107 PHAXQ9H814 394 aaKnown RBP13.18□□□□□ -0.3
ITGB5-211ENST00000608107 DDX21Q9NR30 783 aaKnown RBP eCLIP13.18□□□□□ -0.3
ITGB5-211ENST00000608107 GNPATO15228 680 aa13.17□□□□□ -0.3
ITGB5-211ENST00000608107 AKT1S1Q96B36 256 aa13.17□□□□□ -0.3
ITGB5-211ENST00000608107 STK31Q9BXU1 1019 aa13.17□□□□□ -0.3
ITGB5-211ENST00000608107 SMC4Q9NTJ3 1288 aa13.17□□□□□ -0.3
ITGB5-211ENST00000608107 DBF4Q9UBU7 674 aaPredicted RBP13.17□□□□□ -0.3
ITGB5-211ENST00000608107 ZNF330Q9Y3S2 320 aaPredicted RBP13.17□□□□□ -0.3
ITGB5-211ENST00000608107 RPS6KA4O75676 772 aa13.16□□□□□ -0.3
ITGB5-211ENST00000608107 EIF5P55010 431 aaKnown RBP13.16□□□□□ -0.3
ITGB5-211ENST00000608107 AIMP1Q12904 312 aaKnown RBP13.16□□□□□ -0.3
ITGB5-211ENST00000608107 ALDH1L2Q3SY69 923 aa13.16□□□□□ -0.3
ITGB5-211ENST00000608107 TTLL7Q6ZT98 887 aa13.16□□□□□ -0.3
ITGB5-211ENST00000608107 AK7Q96M32 723 aa13.16□□□□□ -0.3
ITGB5-211ENST00000608107 C4AP0C0L4 1744 aa13.16□□□□□ -0.3
ITGB5-211ENST00000608107 ERBB4Q15303 1308 aa13.15□□□□□ -0.3
ITGB5-211ENST00000608107 PHF14O94880 888 aa13.15□□□□□ -0.3
ITGB5-211ENST00000608107 COPS6Q7L5N1 327 aa13.15□□□□□ -0.3
ITGB5-211ENST00000608107 XAGE3Q8WTP9 111 aa13.15□□□□□ -0.3
ITGB5-211ENST00000608107 ZNF428Q96B54 188 aa13.15□□□□□ -0.3
ITGB5-211ENST00000608107 TNNQ9UQP3 1299 aa13.15□□□□□ -0.3
ITGB5-211ENST00000608107 NUP98P52948 1817 aa13.14□□□□□ -0.31
ITGB5-211ENST00000608107 IL6STP40189 918 aaPredicted RBP13.14□□□□□ -0.31
ITGB5-211ENST00000608107 ARXQ96QS3 562 aa13.14□□□□□ -0.31
ITGB5-211ENST00000608107 HYPKQ9NX55 129 aa13.14□□□□□ -0.31
ITGB5-211ENST00000608107 NOB1Q9ULX3 412 aaKnown RBP13.14□□□□□ -0.31
ITGB5-211ENST00000608107 RTCBQ9Y3I0 505 aaKnown RBP13.14□□□□□ -0.31
ITGB5-211ENST00000608107 ARFGEF2Q9Y6D5 1785 aa13.13□□□□□ -0.31
ITGB5-211ENST00000608107 COL15A1P39059 1388 aa13.13□□□□□ -0.31
ITGB5-211ENST00000608107 PLIN1O60240 522 aa13.13□□□□□ -0.31
ITGB5-211ENST00000608107 FLIIQ13045 1269 aa13.13□□□□□ -0.31
ITGB5-211ENST00000608107 SLC15A2Q16348 729 aa13.13□□□□□ -0.31
ITGB5-211ENST00000608107 ARHGEF1Q92888 912 aaKnown RBP13.13□□□□□ -0.31
ITGB5-211ENST00000608107 STK32BQ9NY57 414 aa13.13□□□□□ -0.31
ITGB5-211ENST00000608107 TFCP2L1Q9NZI6 479 aa13.13□□□□□ -0.31
ITGB5-211ENST00000608107 TBC1D2BQ9UPU7 963 aa13.13□□□□□ -0.31
ITGB5-211ENST00000608107 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.12□□□□□ -0.31
ITGB5-211ENST00000608107 BRPF1P55201 1214 aaPredicted RBP13.12□□□□□ -0.31
ITGB5-211ENST00000608107 COL23A1Q86Y22 540 aaPredicted RBP13.12□□□□□ -0.31
ITGB5-211ENST00000608107 FRAT1Q92837 279 aaPredicted RBP13.12□□□□□ -0.31
ITGB5-211ENST00000608107 CHMP4AQ9BY43 222 aa13.12□□□□□ -0.31
ITGB5-211ENST00000608107 SRP68Q9UHB9 627 aaKnown RBP13.12□□□□□ -0.31
ITGB5-211ENST00000608107 QSER1Q2KHR3 1735 aa13.12□□□□□ -0.31
ITGB5-211ENST00000608107 BCORQ6W2J9 1755 aa13.12□□□□□ -0.31
ITGB5-211ENST00000608107 PNPLA7Q6ZV29 1317 aa13.12□□□□□ -0.31
ITGB5-211ENST00000608107 F6X3S4 739 aa13.11□□□□□ -0.31
ITGB5-211ENST00000608107 CENPBP07199 599 aaPredicted RBP13.11□□□□□ -0.31
ITGB5-211ENST00000608107 FKBP5Q13451 457 aaPredicted RBP13.11□□□□□ -0.31
ITGB5-211ENST00000608107 TRAPPC3LQ5T215 181 aa13.11□□□□□ -0.31
ITGB5-211ENST00000608107 DZIP3Q86Y13 1208 aaKnown RBP13.11□□□□□ -0.31
ITGB5-211ENST00000608107 PDGFDQ9GZP0 370 aaPredicted RBP13.11□□□□□ -0.31
ITGB5-211ENST00000608107 ZBTB3Q9H5J0 574 aa13.11□□□□□ -0.31
ITGB5-211ENST00000608107 SUPT16HQ9Y5B9 1047 aaKnown RBP13.11□□□□□ -0.31
ITGB5-211ENST00000608107 ADCY9O60503 1353 aa13.1□□□□□ -0.31
ITGB5-211ENST00000608107 PI4KAP2A4QPH2 592 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms