RNA–Protein interactions for RNA: ENST00000607494.5

LINC00458-206, long intergenic non-protein coding RNA 458, humanhuman

TSL 3 BASIC

Gene LINC00458, Length 849 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-206ENST00000607494 PLA2G4EQ3MJ16 856 aa11.15□□□□□ -0.62
LINC00458-206ENST00000607494 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.15□□□□□ -0.62
LINC00458-206ENST00000607494 LRRC4BQ9NT99 713 aa11.15□□□□□ -0.62
LINC00458-206ENST00000607494 CABP1Q9NZU7 370 aa11.15□□□□□ -0.62
LINC00458-206ENST00000607494 GGA1Q9UJY5 639 aa11.15□□□□□ -0.62
LINC00458-206ENST00000607494 A0A1W2PNR3 127 aa11.14□□□□□ -0.63
LINC00458-206ENST00000607494 USP17L5A8MUK1 530 aa11.14□□□□□ -0.63
LINC00458-206ENST00000607494 PSME1Q06323 249 aa11.14□□□□□ -0.63
LINC00458-206ENST00000607494 EDARADDQ8WWZ3 215 aa11.14□□□□□ -0.63
LINC00458-206ENST00000607494 ZNF358Q9NW07 568 aa11.14□□□□□ -0.63
LINC00458-206ENST00000607494 ARSJQ5FYB0 599 aaPredicted RBP11.13□□□□□ -0.63
LINC00458-206ENST00000607494 RRAGCQ9HB90 399 aa11.13□□□□□ -0.63
LINC00458-206ENST00000607494 GDF2Q9UK05 429 aaPredicted RBP11.13□□□□□ -0.63
LINC00458-206ENST00000607494 NOD1Q9Y239 953 aa11.13□□□□□ -0.63
LINC00458-206ENST00000607494 PCDHGC4Q9Y5F7 938 aa11.13□□□□□ -0.63
LINC00458-206ENST00000607494 CDK2AP1O14519 115 aa11.12□□□□□ -0.63
LINC00458-206ENST00000607494 CD33P20138 364 aa11.12□□□□□ -0.63
LINC00458-206ENST00000607494 TBCELQ5QJ74 424 aa11.12□□□□□ -0.63
LINC00458-206ENST00000607494 GOLGA6L1Q8N7Z2 621 aa11.12□□□□□ -0.63
LINC00458-206ENST00000607494 ZDHHC1Q8WTX9 485 aa11.12□□□□□ -0.63
LINC00458-206ENST00000607494 ATXN7O15265 892 aaPredicted RBP11.11□□□□□ -0.63
LINC00458-206ENST00000607494 HOXB4P17483 251 aaPredicted RBP11.11□□□□□ -0.63
LINC00458-206ENST00000607494 TXLNAP40222 546 aa11.11□□□□□ -0.63
LINC00458-206ENST00000607494 NBPF1Q3BBV0 1214 aa11.11□□□□□ -0.63
LINC00458-206ENST00000607494 SLCO4C1Q6ZQN7 724 aa11.11□□□□□ -0.63
LINC00458-206ENST00000607494 C1orf216Q8TAB5 229 aa11.11□□□□□ -0.63
LINC00458-206ENST00000607494 NEURL1BA8MQ27 555 aa11.1□□□□□ -0.63
LINC00458-206ENST00000607494 MAPTP10636 758 aaKnown RBP11.1□□□□□ -0.63
LINC00458-206ENST00000607494 FIGNL1Q6PIW4 674 aa11.1□□□□□ -0.63
LINC00458-206ENST00000607494 NLRP8Q86W28 1048 aa11.1□□□□□ -0.63
LINC00458-206ENST00000607494 UCN2Q96RP3 112 aa11.1□□□□□ -0.63
LINC00458-206ENST00000607494 ZIC5Q96T25 663 aa11.1□□□□□ -0.63
LINC00458-206ENST00000607494 KIAA1024Q9UPX6 916 aa11.1□□□□□ -0.63
LINC00458-206ENST00000607494 KHNYNO15037 678 aaKnown RBP11.09□□□□□ -0.63
LINC00458-206ENST00000607494 IGHA1P01876 353 aa11.09□□□□□ -0.63
LINC00458-206ENST00000607494 UBTFP17480 764 aaKnown RBP11.09□□□□□ -0.63
LINC00458-206ENST00000607494 FOXK2Q01167 660 aa11.09□□□□□ -0.63
LINC00458-206ENST00000607494 RAD21O60216 631 aa11.08□□□□□ -0.64
LINC00458-206ENST00000607494 TATP17735 454 aaPredicted RBP11.08□□□□□ -0.64
LINC00458-206ENST00000607494 AMPD1P23109 780 aa11.08□□□□□ -0.64
LINC00458-206ENST00000607494 COL8A1P27658 744 aa11.08□□□□□ -0.64
LINC00458-206ENST00000607494 EPHA4P54764 986 aa11.08□□□□□ -0.64
LINC00458-206ENST00000607494 TNP2Q05952 138 aa11.08□□□□□ -0.64
LINC00458-206ENST00000607494 SH3PXD2AQ5TCZ1 1133 aa11.08□□□□□ -0.64
LINC00458-206ENST00000607494 TNS4Q8IZW8 715 aa11.08□□□□□ -0.64
LINC00458-206ENST00000607494 NFATC2IPQ8NCF5 419 aa11.08□□□□□ -0.64
LINC00458-206ENST00000607494 ZDHHC3Q9NYG2 299 aa11.08□□□□□ -0.64
LINC00458-206ENST00000607494 SCHIP1Q9P0W5 487 aaPredicted RBP11.08□□□□□ -0.64
LINC00458-206ENST00000607494 WWC1Q8IX03 1113 aa11.07□□□□□ -0.64
LINC00458-206ENST00000607494 SPOCK3Q9BQ16 436 aa11.07□□□□□ -0.64
LINC00458-206ENST00000607494 SUV39H2Q9H5I1 410 aa11.07□□□□□ -0.64
LINC00458-206ENST00000607494 STRN4Q9NRL3 753 aa11.07□□□□□ -0.64
LINC00458-206ENST00000607494 KLF15Q9UIH9 416 aa11.07□□□□□ -0.64
LINC00458-206ENST00000607494 MKL2Q9ULH7 1088 aa11.07□□□□□ -0.64
LINC00458-206ENST00000607494 BACH1O14867 736 aa11.06□□□□□ -0.64
LINC00458-206ENST00000607494 EPXP11678 715 aa11.06□□□□□ -0.64
LINC00458-206ENST00000607494 SLC9A9Q8IVB4 645 aa11.06□□□□□ -0.64
LINC00458-206ENST00000607494 KRBA1A5PL33 1030 aa11.05□□□□□ -0.64
LINC00458-206ENST00000607494 USP17L3A6NCW0 530 aa11.05□□□□□ -0.64
LINC00458-206ENST00000607494 USP17L4A6NCW7 530 aa11.05□□□□□ -0.64
LINC00458-206ENST00000607494 PROCP04070 461 aa11.05□□□□□ -0.64
LINC00458-206ENST00000607494 ARAFP10398 606 aa11.05□□□□□ -0.64
LINC00458-206ENST00000607494 CLDN10P78369 228 aa11.05□□□□□ -0.64
LINC00458-206ENST00000607494 USP17L2Q6R6M4 530 aa11.05□□□□□ -0.64
LINC00458-206ENST00000607494 BICDL1Q6ZP65 573 aa11.05□□□□□ -0.64
LINC00458-206ENST00000607494 USP17L1Q7RTZ2 530 aa11.05□□□□□ -0.64
LINC00458-206ENST00000607494 TPCN2Q8NHX9 752 aa11.05□□□□□ -0.64
LINC00458-206ENST00000607494 L3MBTL2Q969R5 705 aa11.05□□□□□ -0.64
LINC00458-206ENST00000607494 MSTNO14793 375 aa11.04□□□□□ -0.64
LINC00458-206ENST00000607494 HDGFL1Q5TGJ6 251 aa11.04□□□□□ -0.64
LINC00458-206ENST00000607494 LINC00114Q6XXX2 140 aa11.04□□□□□ -0.64
LINC00458-206ENST00000607494 FCHSD1Q86WN1 690 aa11.04□□□□□ -0.64
LINC00458-206ENST00000607494 GJA3Q9Y6H8 435 aa11.04□□□□□ -0.64
LINC00458-206ENST00000607494 LZTS3O60299 673 aaPredicted RBP11.03□□□□□ -0.64
LINC00458-206ENST00000607494 FAM157BP0CG42 384 aa11.03□□□□□ -0.64
LINC00458-206ENST00000607494 PCBP4P57723 403 aaKnown RBP11.03□□□□□ -0.64
LINC00458-206ENST00000607494 GRIN2CQ14957 1233 aa11.03□□□□□ -0.64
LINC00458-206ENST00000607494 BTBD6Q96KE9 485 aa11.03□□□□□ -0.64
LINC00458-206ENST00000607494 GTF3C3Q9Y5Q9 886 aa11.03□□□□□ -0.64
LINC00458-206ENST00000607494 ZBTB7BO15156 539 aaPredicted RBP11.02□□□□□ -0.65
LINC00458-206ENST00000607494 NOS2P35228 1153 aa11.02□□□□□ -0.65
LINC00458-206ENST00000607494 FLIIQ13045 1269 aa11.02□□□□□ -0.65
LINC00458-206ENST00000607494 LRRC69Q6ZNQ3 347 aa11.02□□□□□ -0.65
LINC00458-206ENST00000607494 CLUAP1Q96AJ1 413 aa11.02□□□□□ -0.65
LINC00458-206ENST00000607494 TIMELESSQ9UNS1 1208 aa11.02□□□□□ -0.65
LINC00458-206ENST00000607494 ZNF232Q9UNY5 417 aa11.02□□□□□ -0.65
LINC00458-206ENST00000607494 DGKGP49619 791 aa11.01□□□□□ -0.65
LINC00458-206ENST00000607494 TEAD4Q15561 434 aa11.01□□□□□ -0.65
LINC00458-206ENST00000607494 EFSO43281 561 aa11□□□□□ -0.65
LINC00458-206ENST00000607494 FAM182BQ5T319 152 aa11□□□□□ -0.65
LINC00458-206ENST00000607494 CHSY3Q70JA7 882 aa11□□□□□ -0.65
LINC00458-206ENST00000607494 PLEKHM2Q8IWE5 1019 aa11□□□□□ -0.65
LINC00458-206ENST00000607494 TSPAN10Q9H1Z9 355 aaPredicted RBP11□□□□□ -0.65
LINC00458-206ENST00000607494 EML1O00423 815 aa10.99□□□□□ -0.65
LINC00458-206ENST00000607494 ADH6P28332 368 aa10.99□□□□□ -0.65
LINC00458-206ENST00000607494 CCDC102BQ68D86 513 aa10.99□□□□□ -0.65
LINC00458-206ENST00000607494 TRIM50Q86XT4 487 aa10.99□□□□□ -0.65
LINC00458-206ENST00000607494 ATP9BO43861 1147 aa10.98□□□□□ -0.65
LINC00458-206ENST00000607494 SAMD5Q5TGI4 173 aa10.98□□□□□ -0.65
LINC00458-206ENST00000607494 OGFOD1Q8N543 542 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms