RNA–Protein interactions for RNA: ENST00000603840.5

ZSWIM8-218, Transcript of zinc finger SWIM-type containing 8, humanhuman

TSL 1 (best)

Gene ZSWIM8, Length 970 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM8-218ENST00000603840 MYCNP04198 464 aaPredicted RBP13.18□□□□□ -0.3
ZSWIM8-218ENST00000603840 CABP4P57796 275 aa13.18□□□□□ -0.3
ZSWIM8-218ENST00000603840 DDR1Q08345 913 aa13.18□□□□□ -0.3
ZSWIM8-218ENST00000603840 RC3H1Q5TC82 1133 aaKnown RBP13.18□□□□□ -0.3
ZSWIM8-218ENST00000603840 NFATC2IPQ8NCF5 419 aa13.18□□□□□ -0.3
ZSWIM8-218ENST00000603840 CFAP53Q96M91 514 aa13.18□□□□□ -0.3
ZSWIM8-218ENST00000603840 LGR6Q9HBX8 967 aa13.18□□□□□ -0.3
ZSWIM8-218ENST00000603840 C4AP0C0L4 1744 aa13.18□□□□□ -0.3
ZSWIM8-218ENST00000603840 KCPQ6ZWJ8 1503 aa13.18□□□□□ -0.3
ZSWIM8-218ENST00000603840 RPS6KA4O75676 772 aa13.17□□□□□ -0.3
ZSWIM8-218ENST00000603840 DDX10Q13206 875 aaKnown RBP13.17□□□□□ -0.3
ZSWIM8-218ENST00000603840 SRP68Q9UHB9 627 aaKnown RBP13.17□□□□□ -0.3
ZSWIM8-218ENST00000603840 CNTNAP4Q9C0A0 1308 aa13.16□□□□□ -0.3
ZSWIM8-218ENST00000603840 PRELPP51888 382 aa13.16□□□□□ -0.3
ZSWIM8-218ENST00000603840 FKBP8Q14318 412 aa13.16□□□□□ -0.3
ZSWIM8-218ENST00000603840 RBM42Q9BTD8 480 aaKnown RBP13.16□□□□□ -0.3
ZSWIM8-218ENST00000603840 RRAGCQ9HB90 399 aa13.16□□□□□ -0.3
ZSWIM8-218ENST00000603840 CCDC87Q9NVE4 849 aa13.16□□□□□ -0.3
ZSWIM8-218ENST00000603840 RNMTO43148 476 aaKnown RBP13.15□□□□□ -0.3
ZSWIM8-218ENST00000603840 CHRNA5P30532 468 aa13.15□□□□□ -0.3
ZSWIM8-218ENST00000603840 FSTL1Q12841 308 aa13.15□□□□□ -0.3
ZSWIM8-218ENST00000603840 NUDCQ9Y266 331 aa13.15□□□□□ -0.3
ZSWIM8-218ENST00000603840 COL5A3P25940 1745 aaPredicted RBP13.15□□□□□ -0.3
ZSWIM8-218ENST00000603840 ARFGEF1Q9Y6D6 1849 aa13.14□□□□□ -0.31
ZSWIM8-218ENST00000603840 PHACTR3Q96KR7 559 aa13.14□□□□□ -0.31
ZSWIM8-218ENST00000603840 RSPH6AQ9H0K4 717 aa13.14□□□□□ -0.31
ZSWIM8-218ENST00000603840 SLC52A2Q9HAB3 445 aa13.14□□□□□ -0.31
ZSWIM8-218ENST00000603840 PARP3Q9Y6F1 533 aa13.14□□□□□ -0.31
ZSWIM8-218ENST00000603840 ZNF831Q5JPB2 1677 aa13.14□□□□□ -0.31
ZSWIM8-218ENST00000603840 U2AF1L5P0DN76 240 aaPredicted RBP13.13□□□□□ -0.31
ZSWIM8-218ENST00000603840 RFC4P35249 363 aa13.13□□□□□ -0.31
ZSWIM8-218ENST00000603840 ZEB1P37275 1124 aaPredicted RBP13.13□□□□□ -0.31
ZSWIM8-218ENST00000603840 U2AF1Q01081 240 aaKnown RBP eCLIP13.13□□□□□ -0.31
ZSWIM8-218ENST00000603840 RNF181Q9P0P0 153 aa13.13□□□□□ -0.31
ZSWIM8-218ENST00000603840 PIM2Q9P1W9 311 aa13.13□□□□□ -0.31
ZSWIM8-218ENST00000603840 PRKAR2BP31323 418 aa13.12□□□□□ -0.31
ZSWIM8-218ENST00000603840 CRKLP46109 303 aaKnown RBP13.12□□□□□ -0.31
ZSWIM8-218ENST00000603840 DALRD3Q5D0E6 543 aaKnown RBP13.12□□□□□ -0.31
ZSWIM8-218ENST00000603840 GAS2L2Q8NHY3 880 aa13.12□□□□□ -0.31
ZSWIM8-218ENST00000603840 SBF1O95248 1867 aa13.12□□□□□ -0.31
ZSWIM8-218ENST00000603840 USP42Q9H9J4 1324 aaKnown RBP13.12□□□□□ -0.31
ZSWIM8-218ENST00000603840 ADAMTS7Q9UKP4 1686 aa13.12□□□□□ -0.31
ZSWIM8-218ENST00000603840 GNAT3A8MTJ3 354 aa13.11□□□□□ -0.31
ZSWIM8-218ENST00000603840 POLRMTO00411 1230 aaKnown RBP13.11□□□□□ -0.31
ZSWIM8-218ENST00000603840 PTCD1O75127 700 aaKnown RBP13.11□□□□□ -0.31
ZSWIM8-218ENST00000603840 TM4SF1P30408 202 aa13.11□□□□□ -0.31
ZSWIM8-218ENST00000603840 RASSF7Q02833 373 aa13.11□□□□□ -0.31
ZSWIM8-218ENST00000603840 RALBP1Q15311 655 aa13.11□□□□□ -0.31
ZSWIM8-218ENST00000603840 INTS5Q6P9B9 1019 aaKnown RBP13.11□□□□□ -0.31
ZSWIM8-218ENST00000603840 IL17REQ8NFR9 667 aa13.11□□□□□ -0.31
ZSWIM8-218ENST00000603840 C16orf71Q8IYS4 520 aaPredicted RBP13.1□□□□□ -0.31
ZSWIM8-218ENST00000603840 TNS4Q8IZW8 715 aa13.1□□□□□ -0.31
ZSWIM8-218ENST00000603840 SLC39A6Q13433 755 aa13.09□□□□□ -0.31
ZSWIM8-218ENST00000603840 KDM2BQ8NHM5 1336 aa13.09□□□□□ -0.31
ZSWIM8-218ENST00000603840 POTECB2RU33 542 aa13.08□□□□□ -0.32
ZSWIM8-218ENST00000603840 SMC1BQ8NDV3 1235 aa13.07□□□□□ -0.32
ZSWIM8-218ENST00000603840 MRC1P22897 1456 aa13.07□□□□□ -0.32
ZSWIM8-218ENST00000603840 TJP1Q07157 1748 aa13.07□□□□□ -0.32
ZSWIM8-218ENST00000603840 SCN11AQ9UI33 1791 aa13.07□□□□□ -0.32
ZSWIM8-218ENST00000603840 HSPA1AP0DMV8 641 aaKnown RBP13.06□□□□□ -0.32
ZSWIM8-218ENST00000603840 HSPA1BP0DMV9 641 aaKnown RBP13.06□□□□□ -0.32
ZSWIM8-218ENST00000603840 TEFQ10587 303 aa13.06□□□□□ -0.32
ZSWIM8-218ENST00000603840 BCL2L12Q9HB09 334 aa13.06□□□□□ -0.32
ZSWIM8-218ENST00000603840 CEMIPQ8WUJ3 1361 aa13.06□□□□□ -0.32
ZSWIM8-218ENST00000603840 TNRC6CQ9HCJ0 1690 aaKnown RBP13.05□□□□□ -0.32
ZSWIM8-218ENST00000603840 GLTPD2A6NH11 291 aa13.05□□□□□ -0.32
ZSWIM8-218ENST00000603840 NFKBIEO00221 500 aa13.05□□□□□ -0.32
ZSWIM8-218ENST00000603840 NFIXQ14938 502 aa13.05□□□□□ -0.32
ZSWIM8-218ENST00000603840 USPL1Q5W0Q7 1092 aa13.05□□□□□ -0.32
ZSWIM8-218ENST00000603840 DNAJC10Q8IXB1 793 aa13.05□□□□□ -0.32
ZSWIM8-218ENST00000603840 PLEKHF1Q96S99 279 aa13.05□□□□□ -0.32
ZSWIM8-218ENST00000603840 SOS1Q07889 1333 aaPredicted RBP13.05□□□□□ -0.32
ZSWIM8-218ENST00000603840 HTATSF1O43719 755 aaKnown RBP13.04□□□□□ -0.32
ZSWIM8-218ENST00000603840 ZNF790Q6PG37 636 aa13.04□□□□□ -0.32
ZSWIM8-218ENST00000603840 VSIG10Q8N0Z9 540 aa13.04□□□□□ -0.32
ZSWIM8-218ENST00000603840 MYBBP1AQ9BQG0 1328 aaKnown RBP13.04□□□□□ -0.32
ZSWIM8-218ENST00000603840 CYP19A1P11511 503 aaPredicted RBP13.03□□□□□ -0.32
ZSWIM8-218ENST00000603840 VEGFAP15692 232 aaPredicted RBP13.03□□□□□ -0.32
ZSWIM8-218ENST00000603840 LMNB1P20700 586 aa13.03□□□□□ -0.32
ZSWIM8-218ENST00000603840 MCM10Q7L590 875 aa13.03□□□□□ -0.32
ZSWIM8-218ENST00000603840 CARMIL3Q8ND23 1372 aa13.03□□□□□ -0.32
ZSWIM8-218ENST00000603840 AFDNP55196 1824 aaKnown RBP13.02□□□□□ -0.32
ZSWIM8-218ENST00000603840 DCTN1Q14203 1278 aa13.02□□□□□ -0.33
ZSWIM8-218ENST00000603840 TTC5Q8N0Z6 440 aa13.02□□□□□ -0.33
ZSWIM8-218ENST00000603840 RTF1Q92541 710 aaKnown RBP13.02□□□□□ -0.33
ZSWIM8-218ENST00000603840 ZNF496Q96IT1 587 aaPredicted RBP13.02□□□□□ -0.33
ZSWIM8-218ENST00000603840 PRKRIP1Q9H875 184 aaPredicted RBP13.02□□□□□ -0.33
ZSWIM8-218ENST00000603840 ZC3H4Q9UPT8 1303 aaKnown RBP13.02□□□□□ -0.33
ZSWIM8-218ENST00000603840 NRXN2Q9P2S2 1712 aa13.02□□□□□ -0.33
ZSWIM8-218ENST00000603840 BTBD11A6QL63 1104 aa13.01□□□□□ -0.33
ZSWIM8-218ENST00000603840 KCNQ3O43525 872 aa13.01□□□□□ -0.33
ZSWIM8-218ENST00000603840 PNNQ9H307 717 aaKnown RBP13.01□□□□□ -0.33
ZSWIM8-218ENST00000603840 ZBTB1Q9Y2K1 713 aa13.01□□□□□ -0.33
ZSWIM8-218ENST00000603840 SERPINB2P05120 415 aa13□□□□□ -0.33
ZSWIM8-218ENST00000603840 NEFMP07197 916 aa13□□□□□ -0.33
ZSWIM8-218ENST00000603840 POTEIP0CG38 1075 aa13□□□□□ -0.33
ZSWIM8-218ENST00000603840 POTEJP0CG39 1038 aa13□□□□□ -0.33
ZSWIM8-218ENST00000603840 NARFQ9UHQ1 456 aa13□□□□□ -0.33
ZSWIM8-218ENST00000603840 HEG1Q9ULI3 1381 aa12.99□□□□□ -0.33
ZSWIM8-218ENST00000603840 ZNF316A6NFI3 1004 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms