RNA–Protein interactions for RNA: ENST00000600237.5

SYMPK-215, Transcript of symplekin, humanhuman

TSL 5

Gene SYMPK, Length 5,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-215ENST00000600237 ZSCAN12O43309 604 aa16.95■□□□□ 0.3
SYMPK-215ENST00000600237 DDX19AQ9NUU7 478 aaKnown RBP16.95■□□□□ 0.3
SYMPK-215ENST00000600237 DBF4Q9UBU7 674 aaPredicted RBP16.95■□□□□ 0.3
SYMPK-215ENST00000600237 ATP2B2Q01814 1243 aa16.94■□□□□ 0.3
SYMPK-215ENST00000600237 METTL24Q5JXM2 366 aa16.94■□□□□ 0.3
SYMPK-215ENST00000600237 TBC1D9Q6ZT07 1266 aa16.94■□□□□ 0.3
SYMPK-215ENST00000600237 MCM5P33992 734 aa16.94■□□□□ 0.3
SYMPK-215ENST00000600237 MPRIPQ6WCQ1 1025 aa16.94■□□□□ 0.3
SYMPK-215ENST00000600237 STK11IPQ8N1F8 1099 aa16.94■□□□□ 0.3
SYMPK-215ENST00000600237 GBP3Q9H0R5 595 aa16.94■□□□□ 0.3
SYMPK-215ENST00000600237 LRRFIP2Q9Y608 721 aaKnown RBP16.94■□□□□ 0.3
SYMPK-215ENST00000600237 SYCP2Q9BX26 1530 aa16.94■□□□□ 0.3
SYMPK-215ENST00000600237 MSH6P52701 1360 aa16.94■□□□□ 0.3
SYMPK-215ENST00000600237 CAMK4Q16566 473 aa16.94■□□□□ 0.3
SYMPK-215ENST00000600237 ZHX3Q9H4I2 956 aa16.94■□□□□ 0.3
SYMPK-215ENST00000600237 KIAA0754O94854 1291 aa16.94■□□□□ 0.3
SYMPK-215ENST00000600237 IFIT1P09914 478 aaKnown RBP16.94■□□□□ 0.3
SYMPK-215ENST00000600237 FLIIQ13045 1269 aa16.94■□□□□ 0.3
SYMPK-215ENST00000600237 KIF18AQ8NI77 898 aa16.94■□□□□ 0.3
SYMPK-215ENST00000600237 ARHGAP45Q92619 1136 aa16.94■□□□□ 0.3
SYMPK-215ENST00000600237 ADAMTS12P58397 1594 aa16.94■□□□□ 0.3
SYMPK-215ENST00000600237 F6X3S4 739 aa16.93■□□□□ 0.3
SYMPK-215ENST00000600237 NEMFO60524 1076 aa16.93■□□□□ 0.3
SYMPK-215ENST00000600237 ZPR1O75312 459 aa16.93■□□□□ 0.3
SYMPK-215ENST00000600237 HDAC1Q13547 482 aaPredicted RBP16.93■□□□□ 0.3
SYMPK-215ENST00000600237 C8orf76Q96K31 380 aa16.93■□□□□ 0.3
SYMPK-215ENST00000600237 EIF5P55010 431 aaKnown RBP16.93■□□□□ 0.3
SYMPK-215ENST00000600237 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.93■□□□□ 0.31e-6■■■■■ 148
SYMPK-215ENST00000600237 HYPKQ9NX55 129 aa16.93■□□□□ 0.3
SYMPK-215ENST00000600237 PDCL3Q9H2J4 239 aa16.93■□□□□ 0.3
SYMPK-215ENST00000600237 ECHDC1Q9NTX5 307 aa16.93■□□□□ 0.3
SYMPK-215ENST00000600237 ABCC10Q5T3U5 1492 aa16.92■□□□□ 0.3
SYMPK-215ENST00000600237 ITSN2Q9NZM3 1697 aa16.92■□□□□ 0.3
SYMPK-215ENST00000600237 EVI5LQ96CN4 794 aa16.92■□□□□ 0.3
SYMPK-215ENST00000600237 ANKRD36BQ8N2N9 1353 aa16.92■□□□□ 0.3
SYMPK-215ENST00000600237 KLHL40Q2TBA0 621 aa16.92■□□□□ 0.3
SYMPK-215ENST00000600237 PHAXQ9H814 394 aaKnown RBP16.91■□□□□ 0.3
SYMPK-215ENST00000600237 TRAPPC8Q9Y2L5 1435 aa16.91■□□□□ 0.3
SYMPK-215ENST00000600237 CAVIN2O95810 425 aa16.91■□□□□ 0.3
SYMPK-215ENST00000600237 HSP90AB3PQ58FF7 597 aa16.91■□□□□ 0.3
SYMPK-215ENST00000600237 TMCO3Q6UWJ1 677 aa16.91■□□□□ 0.3
SYMPK-215ENST00000600237 IFNL2Q8IZJ0 200 aa16.91■□□□□ 0.3
SYMPK-215ENST00000600237 ZNF287Q9HBT7 754 aa16.91■□□□□ 0.3
SYMPK-215ENST00000600237 KIAA0556O60303 1618 aa16.91■□□□□ 0.3
SYMPK-215ENST00000600237 CCDC85AQ96PX6 553 aaPredicted RBP16.91■□□□□ 0.3
SYMPK-215ENST00000600237 RALGAPBQ86X10 1494 aa16.91■□□□□ 0.3
SYMPK-215ENST00000600237 BAG4O95429 457 aaKnown RBP16.9■□□□□ 0.3
SYMPK-215ENST00000600237 TTC21AQ8NDW8 1320 aa16.9■□□□□ 0.3
SYMPK-215ENST00000600237 DISP3Q9P2K9 1392 aa16.9■□□□□ 0.3
SYMPK-215ENST00000600237 SKIDA1Q1XH10 827 aa16.9■□□□□ 0.3
SYMPK-215ENST00000600237 RIMS2Q9UQ26 1411 aa16.9■□□□□ 0.3
SYMPK-215ENST00000600237 SSBP05455 408 aaKnown RBP eCLIP16.9■□□□□ 0.3
SYMPK-215ENST00000600237 KIAA1328Q86T90 577 aa16.9■□□□□ 0.3
SYMPK-215ENST00000600237 CCDC148Q8NFR7 591 aa16.9■□□□□ 0.3
SYMPK-215ENST00000600237 MYD88Q99836 296 aa16.9■□□□□ 0.3
SYMPK-215ENST00000600237 ZNF397Q8NF99 534 aaPredicted RBP16.9■□□□□ 0.3
SYMPK-215ENST00000600237 NAPBQ9H115 298 aa16.9■□□□□ 0.3
SYMPK-215ENST00000600237 IGHDP01880 384 aa16.89■□□□□ 0.3
SYMPK-215ENST00000600237 TTC22Q5TAA0 569 aa16.89■□□□□ 0.3
SYMPK-215ENST00000600237 RBM5P52756 815 aaKnown RBP eCLIP16.89■□□□□ 0.29
SYMPK-215ENST00000600237 TMEM132AQ24JP5 1023 aa16.89■□□□□ 0.29
SYMPK-215ENST00000600237 ABCF2Q9UG63 623 aa16.89■□□□□ 0.29
SYMPK-215ENST00000600237 GOLGA6L7A0A1B0GV03 622 aa16.89■□□□□ 0.29
SYMPK-215ENST00000600237 STX6O43752 255 aa16.89■□□□□ 0.29
SYMPK-215ENST00000600237 CLIP2Q9UDT6 1046 aa16.89■□□□□ 0.29
SYMPK-215ENST00000600237 USP25Q9UHP3 1055 aa16.89■□□□□ 0.29
SYMPK-215ENST00000600237 NPHP3Q7Z494 1330 aa16.88■□□□□ 0.29
SYMPK-215ENST00000600237 ANKRD24Q8TF21 1146 aa16.88■□□□□ 0.29
SYMPK-215ENST00000600237 CNKSR2Q8WXI2 1034 aa16.88■□□□□ 0.29
SYMPK-215ENST00000600237 CCDC8Q9H0W5 538 aaPredicted RBP16.88■□□□□ 0.29
SYMPK-215ENST00000600237 TEX13AQ9BXU3 409 aaPredicted RBP16.88■□□□□ 0.29
SYMPK-215ENST00000600237 TOP1P11387 765 aaKnown RBP16.88■□□□□ 0.29
SYMPK-215ENST00000600237 MAP3K12Q12852 859 aa16.88■□□□□ 0.29
SYMPK-215ENST00000600237 UVSSAQ2YD98 709 aa16.88■□□□□ 0.29
SYMPK-215ENST00000600237 TAF4BQ92750 862 aa16.88■□□□□ 0.29
SYMPK-215ENST00000600237 GSDMDP57764 484 aa16.88■□□□□ 0.29
SYMPK-215ENST00000600237 IFIT5Q13325 482 aaKnown RBP16.87■□□□□ 0.29
SYMPK-215ENST00000600237 TOM1O60784 492 aa16.87■□□□□ 0.29
SYMPK-215ENST00000600237 NUCB1Q02818 461 aa16.87■□□□□ 0.29
SYMPK-215ENST00000600237 WWC2Q6AWC2 1192 aa16.87■□□□□ 0.29
SYMPK-215ENST00000600237 CCDC102AQ96A19 550 aa16.87■□□□□ 0.29
SYMPK-215ENST00000600237 RNF41Q9H4P4 317 aaPredicted RBP16.87■□□□□ 0.29
SYMPK-215ENST00000600237 MBIPQ9NS73 344 aa16.87■□□□□ 0.29
SYMPK-215ENST00000600237 HMG20BQ9P0W2 317 aa16.87■□□□□ 0.29
SYMPK-215ENST00000600237 PIK3R4Q99570 1358 aa16.87■□□□□ 0.29
SYMPK-215ENST00000600237 ZNF213O14771 459 aa16.87■□□□□ 0.29
SYMPK-215ENST00000600237 NEFHP12036 1026 aa16.87■□□□□ 0.29
SYMPK-215ENST00000600237 UBE2HP62256 183 aa16.86■□□□□ 0.29
SYMPK-215ENST00000600237 CTCFLQ8NI51 663 aaPredicted RBP16.86■□□□□ 0.29
SYMPK-215ENST00000600237 PTPRKQ15262 1439 aa16.86■□□□□ 0.29
SYMPK-215ENST00000600237 KIF5CO60282 957 aa16.86■□□□□ 0.29
SYMPK-215ENST00000600237 USP8P40818 1118 aa16.86■□□□□ 0.29
SYMPK-215ENST00000600237 NUP160Q12769 1436 aa16.86■□□□□ 0.29
SYMPK-215ENST00000600237 CRACR2AQ9BSW2 395 aa16.86■□□□□ 0.29
SYMPK-215ENST00000600237 CAVIN4Q5BKX8 364 aa16.85■□□□□ 0.29
SYMPK-215ENST00000600237 IQCA1Q86XH1 822 aa16.85■□□□□ 0.29
SYMPK-215ENST00000600237 ZRSR2Q15696 482 aaKnown RBP16.85■□□□□ 0.29
SYMPK-215ENST00000600237 CHRNA2Q15822 529 aa16.85■□□□□ 0.29
SYMPK-215ENST00000600237 SPA17Q15506 151 aa16.85■□□□□ 0.29
SYMPK-215ENST00000600237 ABCC2Q92887 1545 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms