RNA–Protein interactions for RNA: ENST00000595452.1

TMEM38A-202, Transcript of transmembrane protein 38A, humanhuman

TSL 2

Gene TMEM38A, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-202ENST00000595452 SYT17Q9BSW7 474 aa17.94■□□□□ 0.46
TMEM38A-202ENST00000595452 COL15A1P39059 1388 aa17.93■□□□□ 0.46
TMEM38A-202ENST00000595452 A0A087WZG4 1122 aa17.93■□□□□ 0.46
TMEM38A-202ENST00000595452 TMPOP42166 694 aaKnown RBP17.93■□□□□ 0.46
TMEM38A-202ENST00000595452 INTS5Q6P9B9 1019 aaKnown RBP17.93■□□□□ 0.46
TMEM38A-202ENST00000595452 CCDC146Q8IYE0 955 aa17.93■□□□□ 0.46
TMEM38A-202ENST00000595452 SNRPA1P09661 255 aaKnown RBP17.92■□□□□ 0.46
TMEM38A-202ENST00000595452 ADAMTS8Q9UP79 889 aa17.92■□□□□ 0.46
TMEM38A-202ENST00000595452 SOS1Q07889 1333 aaPredicted RBP17.92■□□□□ 0.46
TMEM38A-202ENST00000595452 USP42Q9H9J4 1324 aaKnown RBP17.92■□□□□ 0.46
TMEM38A-202ENST00000595452 SMIM5Q71RC9 77 aa17.91■□□□□ 0.46
TMEM38A-202ENST00000595452 ZBTB1Q9Y2K1 713 aa17.91■□□□□ 0.46
TMEM38A-202ENST00000595452 MMP10P09238 476 aa17.9■□□□□ 0.46
TMEM38A-202ENST00000595452 CANXP27824 592 aaKnown RBP17.9■□□□□ 0.46
TMEM38A-202ENST00000595452 BABAM1Q9NWV8 329 aa17.9■□□□□ 0.46
TMEM38A-202ENST00000595452 CD2APQ9Y5K6 639 aa17.9■□□□□ 0.46
TMEM38A-202ENST00000595452 GYS1P13807 737 aa17.89■□□□□ 0.45
TMEM38A-202ENST00000595452 NEUROD2Q15784 382 aa17.89■□□□□ 0.45
TMEM38A-202ENST00000595452 MRS2Q9HD23 443 aa17.89■□□□□ 0.45
TMEM38A-202ENST00000595452 TSPYL4Q9UJ04 414 aa17.89■□□□□ 0.45
TMEM38A-202ENST00000595452 ZNF330Q9Y3S2 320 aaPredicted RBP17.89■□□□□ 0.45
TMEM38A-202ENST00000595452 PARP3Q9Y6F1 533 aa17.89■□□□□ 0.45
TMEM38A-202ENST00000595452 IL6STP40189 918 aaPredicted RBP17.88■□□□□ 0.45
TMEM38A-202ENST00000595452 CALD1Q05682 793 aaKnown RBP17.88■□□□□ 0.45
TMEM38A-202ENST00000595452 SCN7AQ01118 1682 aa17.87■□□□□ 0.45
TMEM38A-202ENST00000595452 KCNQ3O43525 872 aa17.87■□□□□ 0.45
TMEM38A-202ENST00000595452 THUMPD2Q9BTF0 503 aaKnown RBP17.87■□□□□ 0.45
TMEM38A-202ENST00000595452 NARFQ9UHQ1 456 aa17.87■□□□□ 0.45
TMEM38A-202ENST00000595452 RRP7AQ9Y3A4 280 aaKnown RBP17.87■□□□□ 0.45
TMEM38A-202ENST00000595452 KIF13BQ9NQT8 1826 aa17.86■□□□□ 0.45
TMEM38A-202ENST00000595452 EIF5P55010 431 aaKnown RBP17.85■□□□□ 0.45
TMEM38A-202ENST00000595452 USPL1Q5W0Q7 1092 aa17.85■□□□□ 0.45
TMEM38A-202ENST00000595452 MIS18AQ9NYP9 233 aa17.85■□□□□ 0.45
TMEM38A-202ENST00000595452 SRP68Q9UHB9 627 aaKnown RBP17.85■□□□□ 0.45
TMEM38A-202ENST00000595452 GPR162Q16538 588 aa17.84■□□□□ 0.45
TMEM38A-202ENST00000595452 PELP1Q8IZL8 1130 aaKnown RBP17.84■□□□□ 0.45
TMEM38A-202ENST00000595452 BCORQ6W2J9 1755 aa17.84■□□□□ 0.45
TMEM38A-202ENST00000595452 ZNF652Q9Y2D9 606 aa17.83■□□□□ 0.44
TMEM38A-202ENST00000595452 USP16Q9Y5T5 823 aa17.83■□□□□ 0.44
TMEM38A-202ENST00000595452 CHD4Q14839 1912 aa17.82■□□□□ 0.44
TMEM38A-202ENST00000595452 A1BGP04217 495 aa17.82■□□□□ 0.44
TMEM38A-202ENST00000595452 EIF4A1P60842 406 aaKnown RBP17.82■□□□□ 0.44
TMEM38A-202ENST00000595452 FKBP8Q14318 412 aa17.82■□□□□ 0.44
TMEM38A-202ENST00000595452 C10orf71Q711Q0 1435 aa17.81■□□□□ 0.44
TMEM38A-202ENST00000595452 APAF1O14727 1248 aa17.81■□□□□ 0.44
TMEM38A-202ENST00000595452 GIGYF1O75420 1035 aaPredicted RBP17.81■□□□□ 0.44
TMEM38A-202ENST00000595452 DZIP3Q86Y13 1208 aaKnown RBP17.81■□□□□ 0.44
TMEM38A-202ENST00000595452 NLGN2Q8NFZ4 835 aa17.81■□□□□ 0.44
TMEM38A-202ENST00000595452 LAS1LQ9Y4W2 734 aaKnown RBP17.81■□□□□ 0.44
TMEM38A-202ENST00000595452 GOLGB1Q14789 3259 aaKnown RBP17.81■□□□□ 0.44
TMEM38A-202ENST00000595452 ERBB4Q15303 1308 aa17.8■□□□□ 0.44
TMEM38A-202ENST00000595452 TRIM35Q9UPQ4 493 aa17.8■□□□□ 0.44
TMEM38A-202ENST00000595452 NPHP1O15259 732 aa17.79■□□□□ 0.44
TMEM38A-202ENST00000595452 GRIN3BO60391 1043 aa17.79■□□□□ 0.44
TMEM38A-202ENST00000595452 TGFB2P61812 414 aa17.79■□□□□ 0.44
TMEM38A-202ENST00000595452 AFDNP55196 1824 aaKnown RBP17.79■□□□□ 0.44
TMEM38A-202ENST00000595452 PRAMEF22A3QJZ6 481 aa17.78■□□□□ 0.44
TMEM38A-202ENST00000595452 RGL2O15211 777 aa17.78■□□□□ 0.44
TMEM38A-202ENST00000595452 TBC1D2BQ9UPU7 963 aa17.78■□□□□ 0.44
TMEM38A-202ENST00000595452 CARMIL3Q8ND23 1372 aa17.78■□□□□ 0.44
TMEM38A-202ENST00000595452 POLRMTO00411 1230 aaKnown RBP17.77■□□□□ 0.44
TMEM38A-202ENST00000595452 GNAI1P63096 354 aa17.77■□□□□ 0.44
TMEM38A-202ENST00000595452 KIF6Q6ZMV9 814 aa17.77■□□□□ 0.44
TMEM38A-202ENST00000595452 CFAP44Q96MT7 982 aa17.77■□□□□ 0.44
TMEM38A-202ENST00000595452 NRXN2Q9P2S2 1712 aa17.77■□□□□ 0.44
TMEM38A-202ENST00000595452 N4BP2Q86UW6 1770 aaPredicted RBP17.76■□□□□ 0.43
TMEM38A-202ENST00000595452 UTRNP46939 3433 aa17.76■□□□□ 0.43
TMEM38A-202ENST00000595452 CHL1O00533 1208 aa17.76■□□□□ 0.43
TMEM38A-202ENST00000595452 TM4SF1P30408 202 aa17.76■□□□□ 0.43
TMEM38A-202ENST00000595452 DDR1Q08345 913 aa17.76■□□□□ 0.43
TMEM38A-202ENST00000595452 NFIXQ14938 502 aa17.76■□□□□ 0.43
TMEM38A-202ENST00000595452 CCDC184Q52MB2 194 aa17.76■□□□□ 0.43
TMEM38A-202ENST00000595452 CLEC4GQ6UXB4 293 aa17.76■□□□□ 0.43
TMEM38A-202ENST00000595452 CHMP4AQ9BY43 222 aa17.76■□□□□ 0.43
TMEM38A-202ENST00000595452 IFT57Q9NWB7 429 aa17.76■□□□□ 0.43
TMEM38A-202ENST00000595452 PIP4K2AP48426 406 aaPredicted RBP17.75■□□□□ 0.43
TMEM38A-202ENST00000595452 BICDL1Q6ZP65 573 aa17.75■□□□□ 0.43
TMEM38A-202ENST00000595452 SETDB2Q96T68 719 aa17.75■□□□□ 0.43
TMEM38A-202ENST00000595452 PXDNLA1KZ92 1463 aa17.75■□□□□ 0.43
TMEM38A-202ENST00000595452 CAMTA2O94983 1202 aa17.74■□□□□ 0.43
TMEM38A-202ENST00000595452 SERPINB2P05120 415 aa17.74■□□□□ 0.43
TMEM38A-202ENST00000595452 HOXB7P09629 217 aa17.74■□□□□ 0.43
TMEM38A-202ENST00000595452 MYL6BP14649 208 aa17.74■□□□□ 0.43
TMEM38A-202ENST00000595452 CCDC27Q2M243 656 aa17.74■□□□□ 0.43
TMEM38A-202ENST00000595452 NCBP3Q53F19 620 aaKnown RBP17.74■□□□□ 0.43
TMEM38A-202ENST00000595452 KIAA1551Q9HCM1 1747 aa17.73■□□□□ 0.43
TMEM38A-202ENST00000595452 NBPF26B4DH59 902 aa17.73■□□□□ 0.43
TMEM38A-202ENST00000595452 EIF2S2P20042 333 aaKnown RBP17.73■□□□□ 0.43
TMEM38A-202ENST00000595452 YY1P25490 414 aa17.73■□□□□ 0.43
TMEM38A-202ENST00000595452 NBPF10Q6P3W6 841 aaKnown RBP17.73■□□□□ 0.43
TMEM38A-202ENST00000595452 NBPF15Q8N660 670 aa17.73■□□□□ 0.43
TMEM38A-202ENST00000595452 BCL2L12Q9HB09 334 aa17.73■□□□□ 0.43
TMEM38A-202ENST00000595452 BRCA1P38398 1863 aaKnown RBP17.73■□□□□ 0.43
TMEM38A-202ENST00000595452 ST5P78524 1137 aa17.72■□□□□ 0.43
TMEM38A-202ENST00000595452 TBC1D9BQ66K14 1250 aa17.72■□□□□ 0.43
TMEM38A-202ENST00000595452 FAM9BQ8IZU0 186 aa17.72■□□□□ 0.43
TMEM38A-202ENST00000595452 NGEFQ8N5V2 710 aa17.72■□□□□ 0.43
TMEM38A-202ENST00000595452 PDZRN3Q9UPQ7 1066 aa17.72■□□□□ 0.43
TMEM38A-202ENST00000595452 NUP98P52948 1817 aa17.72■□□□□ 0.43
TMEM38A-202ENST00000595452 CNBD1Q8NA66 436 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms