RNA–Protein interactions for RNA: ENST00000592763.5

ILF3-222, Transcript of interleukin enhancer binding factor 3, human

TSL 5 BASIC

Gene ILF3, Length 3,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ILF3-222	ENST00000592763	DDB1	Q16531	1140 aa		13.32	□□□□□ -0.28
ILF3-222	ENST00000592763	KIAA1211	Q6ZU35	1233 aa		13.32	□□□□□ -0.28
ILF3-222	ENST00000592763	TAOK2	Q9UL54	1235 aa		13.32	□□□□□ -0.28
ILF3-222	ENST00000592763	PA2G4	Q9UQ80	394 aa	Known RBP	13.32	□□□□□ -0.28
ILF3-222	ENST00000592763	WDR17	Q8IZU2	1322 aa		13.32	□□□□□ -0.28
ILF3-222	ENST00000592763	PCDH11X	Q9BZA7	1347 aa		13.32	□□□□□ -0.28
ILF3-222	ENST00000592763	PCDH11Y	Q9BZA8	1340 aa		13.32	□□□□□ -0.28
ILF3-222	ENST00000592763	USP32	Q8NFA0	1604 aa		13.31	□□□□□ -0.28
ILF3-222	ENST00000592763	MST1R	Q04912	1400 aa		13.31	□□□□□ -0.28
ILF3-222	ENST00000592763	TNS3	Q68CZ2	1445 aa		13.31	□□□□□ -0.28
ILF3-222	ENST00000592763	CDC45	O75419	566 aa		13.31	□□□□□ -0.28
ILF3-222	ENST00000592763	KIF6	Q6ZMV9	814 aa		13.31	□□□□□ -0.28
ILF3-222	ENST00000592763	SIRT2	Q8IXJ6	389 aa		13.31	□□□□□ -0.28
ILF3-222	ENST00000592763	GPATCH3	Q96I76	525 aa		13.31	□□□□□ -0.28
ILF3-222	ENST00000592763	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.31	□□□□□ -0.28
ILF3-222	ENST00000592763	STARD3NL	O95772	234 aa		13.3	□□□□□ -0.28
ILF3-222	ENST00000592763	PRIM1	P49642	420 aa	Known RBP	13.3	□□□□□ -0.28
ILF3-222	ENST00000592763	USP44	Q9H0E7	712 aa		13.3	□□□□□ -0.28
ILF3-222	ENST00000592763	DCTPP1	Q9H773	170 aa		13.3	□□□□□ -0.28
ILF3-222	ENST00000592763	KIF20B	Q96Q89	1820 aa		13.3	□□□□□ -0.28
ILF3-222	ENST00000592763	FAM98C	Q17RN3	349 aa	Known RBP	13.29	□□□□□ -0.28
ILF3-222	ENST00000592763	CRB1	P82279	1406 aa		13.29	□□□□□ -0.28
ILF3-222	ENST00000592763	FAM182B	Q5T319	152 aa		13.29	□□□□□ -0.28
ILF3-222	ENST00000592763	KLHDC4	Q8TBB5	520 aa		13.29	□□□□□ -0.28
ILF3-222	ENST00000592763	HSP90AB4P	Q58FF6	505 aa		13.29	□□□□□ -0.28
ILF3-222	ENST00000592763	AACS	Q86V21	672 aa		13.29	□□□□□ -0.28
ILF3-222	ENST00000592763	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.29	□□□□□ -0.28
ILF3-222	ENST00000592763	ASAP1	Q9ULH1	1129 aa		13.29	□□□□□ -0.28
ILF3-222	ENST00000592763	BICDL1	Q6ZP65	573 aa		13.28	□□□□□ -0.28
ILF3-222	ENST00000592763	SHPRH	Q149N8	1683 aa		13.28	□□□□□ -0.28
ILF3-222	ENST00000592763	BABAM1	Q9NWV8	329 aa		13.28	□□□□□ -0.28
ILF3-222	ENST00000592763	GRM8	O00222	908 aa		13.28	□□□□□ -0.28
ILF3-222	ENST00000592763	CARD10	Q9BWT7	1032 aa		13.28	□□□□□ -0.28
ILF3-222	ENST00000592763	TBC1D2B	Q9UPU7	963 aa		13.28	□□□□□ -0.28
ILF3-222	ENST00000592763	MX1	P20591	662 aa		13.27	□□□□□ -0.28
ILF3-222	ENST00000592763	DNAJC10	Q8IXB1	793 aa		13.27	□□□□□ -0.28
ILF3-222	ENST00000592763	DIAPH3	Q9NSV4	1193 aa		13.27	□□□□□ -0.28
ILF3-222	ENST00000592763	ATP8B2	P98198	1209 aa		13.27	□□□□□ -0.29
ILF3-222	ENST00000592763	MCC	P23508	829 aa		13.27	□□□□□ -0.29
ILF3-222	ENST00000592763	BRPF1	P55201	1214 aa	Predicted RBP	13.27	□□□□□ -0.29
ILF3-222	ENST00000592763	LINS1	Q8NG48	757 aa		13.27	□□□□□ -0.29
ILF3-222	ENST00000592763	RGPD8	O14715	1765 aa	Predicted RBP	13.27	□□□□□ -0.29
ILF3-222	ENST00000592763	TBC1D9	Q6ZT07	1266 aa		13.26	□□□□□ -0.29
ILF3-222	ENST00000592763	ADAMTSL3	P82987	1691 aa		13.26	□□□□□ -0.29
ILF3-222	ENST00000592763	DNAJC2	Q99543	621 aa	Known RBP	13.26	□□□□□ -0.29
ILF3-222	ENST00000592763	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.26	□□□□□ -0.29
ILF3-222	ENST00000592763	KIF1BP	Q96EK5	621 aa		13.25	□□□□□ -0.29
ILF3-222	ENST00000592763	SOS2	Q07890	1332 aa	Predicted RBP	13.25	□□□□□ -0.29
ILF3-222	ENST00000592763	HOXB7	P09629	217 aa		13.25	□□□□□ -0.29
ILF3-222	ENST00000592763	KCNQ4	P56696	695 aa		13.25	□□□□□ -0.29
ILF3-222	ENST00000592763	FGD1	P98174	961 aa		13.25	□□□□□ -0.29
ILF3-222	ENST00000592763	TTLL7	Q6ZT98	887 aa		13.25	□□□□□ -0.29
ILF3-222	ENST00000592763	PLEKHM2	Q8IWE5	1019 aa		13.25	□□□□□ -0.29
ILF3-222	ENST00000592763	RHPN1	Q8TCX5	695 aa		13.25	□□□□□ -0.29
ILF3-222	ENST00000592763	REC8	O95072	547 aa		13.24	□□□□□ -0.29
ILF3-222	ENST00000592763	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.24	□□□□□ -0.29
ILF3-222	ENST00000592763	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.24	□□□□□ -0.29
ILF3-222	ENST00000592763	BICC1	Q9H694	974 aa	Known RBP	13.24	□□□□□ -0.29
ILF3-222	ENST00000592763	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.24	□□□□□ -0.29	2e-9	■■□□□ 12.8
ILF3-222	ENST00000592763	SETD1A	O15047	1707 aa	Known RBP	13.24	□□□□□ -0.29
ILF3-222	ENST00000592763	SDS	P20132	328 aa		13.24	□□□□□ -0.29
ILF3-222	ENST00000592763	ATP6V1A	P38606	617 aa		13.24	□□□□□ -0.29
ILF3-222	ENST00000592763	BMP2KL	Q5H9B9	411 aa		13.24	□□□□□ -0.29
ILF3-222	ENST00000592763	BOLA2	Q9H3K6	86 aa		13.24	□□□□□ -0.29
ILF3-222	ENST00000592763	BEND3	Q5T5X7	828 aa		13.23	□□□□□ -0.29
ILF3-222	ENST00000592763	LMBR1L	Q6UX01	489 aa		13.23	□□□□□ -0.29
ILF3-222	ENST00000592763	CWC27	Q6UX04	472 aa	Known RBP	13.23	□□□□□ -0.29
ILF3-222	ENST00000592763	ERC2	O15083	957 aa		13.23	□□□□□ -0.29
ILF3-222	ENST00000592763	PDE1A	P54750	535 aa		13.23	□□□□□ -0.29
ILF3-222	ENST00000592763	ADGRB2	O60241	1585 aa		13.22	□□□□□ -0.29
ILF3-222	ENST00000592763	CCDC57	Q2TAC2	916 aa		13.22	□□□□□ -0.29
ILF3-222	ENST00000592763	TTC22	Q5TAA0	569 aa		13.22	□□□□□ -0.29
ILF3-222	ENST00000592763	SUCLG2	Q96I99	432 aa		13.22	□□□□□ -0.29
ILF3-222	ENST00000592763	FSD1	Q9BTV5	496 aa		13.22	□□□□□ -0.29
ILF3-222	ENST00000592763	KNDC1	Q76NI1	1749 aa		13.22	□□□□□ -0.29
ILF3-222	ENST00000592763	TRMT112	Q9UI30	125 aa	Known RBP	13.22	□□□□□ -0.29
ILF3-222	ENST00000592763	ALDH1L1	O75891	902 aa		13.21	□□□□□ -0.29
ILF3-222	ENST00000592763	FAM89A	Q96GI7	184 aa		13.21	□□□□□ -0.29
ILF3-222	ENST00000592763	CWC25	Q9NXE8	425 aa	Predicted RBP	13.21	□□□□□ -0.29
ILF3-222	ENST00000592763	EIF5B	O60841	1220 aa	Known RBP	13.21	□□□□□ -0.29
ILF3-222	ENST00000592763	CNTROB	Q8N137	903 aa		13.21	□□□□□ -0.29
ILF3-222	ENST00000592763	PIGB	Q92521	554 aa		13.21	□□□□□ -0.29
ILF3-222	ENST00000592763	ERVV-2	B6SEH9	535 aa		13.2	□□□□□ -0.3
ILF3-222	ENST00000592763	NCL	P19338	710 aa	Known RBP	13.2	□□□□□ -0.3
ILF3-222	ENST00000592763	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.2	□□□□□ -0.3
ILF3-222	ENST00000592763	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.2	□□□□□ -0.3
ILF3-222	ENST00000592763	CNNM1	Q9NRU3	951 aa		13.2	□□□□□ -0.3
ILF3-222	ENST00000592763	ERC1	Q8IUD2	1116 aa		13.2	□□□□□ -0.3
ILF3-222	ENST00000592763	METTL22	Q9BUU2	404 aa	Predicted RBP	13.2	□□□□□ -0.3
ILF3-222	ENST00000592763	SOS1	Q07889	1333 aa	Predicted RBP	13.2	□□□□□ -0.3
ILF3-222	ENST00000592763	GCKR	Q14397	625 aa		13.19	□□□□□ -0.3
ILF3-222	ENST00000592763	XRN1	Q8IZH2	1706 aa	Known RBP	13.19	□□□□□ -0.3
ILF3-222	ENST00000592763	FRAT2	O75474	233 aa	Predicted RBP	13.19	□□□□□ -0.3
ILF3-222	ENST00000592763	GZF1	Q9H116	711 aa	Predicted RBP	13.19	□□□□□ -0.3
ILF3-222	ENST00000592763	PXDN	Q92626	1479 aa		13.19	□□□□□ -0.3
ILF3-222	ENST00000592763	ST18	O60284	1047 aa		13.18	□□□□□ -0.3
ILF3-222	ENST00000592763	RAB11FIP3	O75154	756 aa		13.18	□□□□□ -0.3
ILF3-222	ENST00000592763	NEK4	P51957	841 aa		13.18	□□□□□ -0.3
ILF3-222	ENST00000592763	USP21	Q9UK80	565 aa		13.18	□□□□□ -0.3
ILF3-222	ENST00000592763	MON2	Q7Z3U7	1717 aa		13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms