RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 NLRP2Q9NX02 1062 aa19.44■□□□□ 0.7
MBD1-227ENST00000592060 PARP4Q9UKK3 1724 aaKnown RBP19.44■□□□□ 0.7
MBD1-227ENST00000592060 CABLES1Q8TDN4 633 aa19.44■□□□□ 0.7
MBD1-227ENST00000592060 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.44■□□□□ 0.7
MBD1-227ENST00000592060 TATP17735 454 aaPredicted RBP19.43■□□□□ 0.7
MBD1-227ENST00000592060 PROSER3Q2NL68 480 aa19.43■□□□□ 0.7
MBD1-227ENST00000592060 USP26Q9BXU7 913 aa19.43■□□□□ 0.7
MBD1-227ENST00000592060 CHMP5Q9NZZ3 219 aa19.43■□□□□ 0.7
MBD1-227ENST00000592060 PRAMEF22A3QJZ6 481 aa19.43■□□□□ 0.7
MBD1-227ENST00000592060 PHKG2P15735 406 aa19.43■□□□□ 0.7
MBD1-227ENST00000592060 CD2BP2O95400 341 aaKnown RBP19.42■□□□□ 0.7
MBD1-227ENST00000592060 NBPF7P0C2Y1 421 aaPredicted RBP19.42■□□□□ 0.7
MBD1-227ENST00000592060 STAP2Q9UGK3 403 aa19.42■□□□□ 0.7
MBD1-227ENST00000592060 MX1P20591 662 aa19.41■□□□□ 0.7
MBD1-227ENST00000592060 GSE1Q14687 1217 aa19.41■□□□□ 0.7
MBD1-227ENST00000592060 CASC1Q6TDU7 716 aa19.41■□□□□ 0.7
MBD1-227ENST00000592060 PPP1R42Q7Z4L9 355 aa19.41■□□□□ 0.7
MBD1-227ENST00000592060 SLC52A2Q9HAB3 445 aa19.41■□□□□ 0.7
MBD1-227ENST00000592060 SPG7Q9UQ90 795 aa19.41■□□□□ 0.7
MBD1-227ENST00000592060 ABCA3Q99758 1704 aa19.41■□□□□ 0.7
MBD1-227ENST00000592060 RBM42Q9BTD8 480 aaKnown RBP19.41■□□□□ 0.7
MBD1-227ENST00000592060 AOX1Q06278 1338 aa19.4■□□□□ 0.7
MBD1-227ENST00000592060 CHRNA2Q15822 529 aa19.4■□□□□ 0.7
MBD1-227ENST00000592060 ILDR2Q71H61 639 aa19.4■□□□□ 0.7
MBD1-227ENST00000592060 GLI3P10071 1580 aa19.39■□□□□ 0.7
MBD1-227ENST00000592060 RAB11FIP3O75154 756 aa19.39■□□□□ 0.7
MBD1-227ENST00000592060 ALDH1L1O75891 902 aa19.39■□□□□ 0.7
MBD1-227ENST00000592060 KSR2Q6VAB6 950 aa19.39■□□□□ 0.7
MBD1-227ENST00000592060 BRINP3Q76B58 766 aa19.39■□□□□ 0.7
MBD1-227ENST00000592060 TSHZ3Q63HK5 1081 aa19.39■□□□□ 0.69
MBD1-227ENST00000592060 ZNF790Q6PG37 636 aa19.39■□□□□ 0.69
MBD1-227ENST00000592060 HYPKQ9NX55 129 aa19.39■□□□□ 0.69
MBD1-227ENST00000592060 MAP3K2Q9Y2U5 619 aa19.39■□□□□ 0.69
MBD1-227ENST00000592060 K7ELQ4 463 aaPredicted RBP19.38■□□□□ 0.69
MBD1-227ENST00000592060 HSP90AB1P08238 724 aaKnown RBP19.38■□□□□ 0.69
MBD1-227ENST00000592060 CSB-PGBD3P0DP91 1061 aa19.38■□□□□ 0.69
MBD1-227ENST00000592060 PDIA6Q15084 440 aa19.38■□□□□ 0.69
MBD1-227ENST00000592060 IFNL2Q8IZJ0 200 aa19.38■□□□□ 0.69
MBD1-227ENST00000592060 DDX21Q9NR30 783 aaKnown RBP eCLIP19.38■□□□□ 0.69
MBD1-227ENST00000592060 ERC2O15083 957 aa19.37■□□□□ 0.69
MBD1-227ENST00000592060 RABEP1Q15276 862 aa19.37■□□□□ 0.69
MBD1-227ENST00000592060 CERKQ8TCT0 537 aa19.37■□□□□ 0.69
MBD1-227ENST00000592060 AK9Q5TCS8 1911 aa19.37■□□□□ 0.69
MBD1-227ENST00000592060 LAMB4A4D0S4 1761 aa19.37■□□□□ 0.69
MBD1-227ENST00000592060 MTX1Q13505 466 aa19.37■□□□□ 0.69
MBD1-227ENST00000592060 SRGAP3O43295 1099 aa19.36■□□□□ 0.69
MBD1-227ENST00000592060 REC8O95072 547 aa19.36■□□□□ 0.69
MBD1-227ENST00000592060 SLC39A6Q13433 755 aa19.36■□□□□ 0.69
MBD1-227ENST00000592060 CYP27B1O15528 508 aa19.35■□□□□ 0.69
MBD1-227ENST00000592060 SURF6O75683 361 aaKnown RBP19.35■□□□□ 0.69
MBD1-227ENST00000592060 CIZ1Q9ULV3 898 aaPredicted RBP19.35■□□□□ 0.69
MBD1-227ENST00000592060 RHPN1Q8TCX5 695 aa19.35■□□□□ 0.69
MBD1-227ENST00000592060 NFATC2IPQ8NCF5 419 aa19.34■□□□□ 0.69
MBD1-227ENST00000592060 DCAF5Q96JK2 942 aa19.34■□□□□ 0.69
MBD1-227ENST00000592060 IL1RAPL2Q9NP60 686 aa19.34■□□□□ 0.69
MBD1-227ENST00000592060 KIF1BPQ96EK5 621 aa19.33■□□□□ 0.69
MBD1-227ENST00000592060 UTYO14607 1347 aa19.33■□□□□ 0.69
MBD1-227ENST00000592060 SOS2Q07890 1332 aaPredicted RBP19.33■□□□□ 0.69
MBD1-227ENST00000592060 MCM4P33991 863 aa19.33■□□□□ 0.68
MBD1-227ENST00000592060 ESYT1Q9BSJ8 1104 aa19.33■□□□□ 0.68
MBD1-227ENST00000592060 DDX58O95786 925 aaKnown RBP19.32■□□□□ 0.68
MBD1-227ENST00000592060 CWF19L2Q2TBE0 894 aaKnown RBP19.32■□□□□ 0.68
MBD1-227ENST00000592060 LINS1Q8NG48 757 aa19.32■□□□□ 0.68
MBD1-227ENST00000592060 SHANK3Q9BYB0 1731 aa19.32■□□□□ 0.68
MBD1-227ENST00000592060 CHMLP26374 656 aa19.32■□□□□ 0.68
MBD1-227ENST00000592060 ZNF496Q96IT1 587 aaPredicted RBP19.32■□□□□ 0.68
MBD1-227ENST00000592060 COL5A2P05997 1499 aaPredicted RBP19.31■□□□□ 0.68
MBD1-227ENST00000592060 UBR2Q8IWV8 1755 aa19.31■□□□□ 0.68
MBD1-227ENST00000592060 HSP90AB4PQ58FF6 505 aa19.31■□□□□ 0.68
MBD1-227ENST00000592060 NUTM1Q86Y26 1132 aa19.31■□□□□ 0.68
MBD1-227ENST00000592060 UNC5CLQ8IV45 518 aa19.31■□□□□ 0.68
MBD1-227ENST00000592060 PI4K2BQ8TCG2 481 aa19.31■□□□□ 0.68
MBD1-227ENST00000592060 C9orf78Q9NZ63 289 aaPredicted RBP19.31■□□□□ 0.68
MBD1-227ENST00000592060 NHSL1Q5SYE7 1610 aa19.31■□□□□ 0.68
MBD1-227ENST00000592060 PAPPAQ13219 1627 aa19.3■□□□□ 0.68
MBD1-227ENST00000592060 WDR17Q8IZU2 1322 aa19.3■□□□□ 0.68
MBD1-227ENST00000592060 USP42Q9H9J4 1324 aaKnown RBP19.3■□□□□ 0.68
MBD1-227ENST00000592060 ARFGEF2Q9Y6D5 1785 aa19.3■□□□□ 0.68
MBD1-227ENST00000592060 SOCS7O14512 581 aa19.3■□□□□ 0.68
MBD1-227ENST00000592060 LRP10Q7Z4F1 713 aa19.3■□□□□ 0.68
MBD1-227ENST00000592060 ZNF335Q9H4Z2 1342 aaPredicted RBP19.29■□□□□ 0.68
MBD1-227ENST00000592060 GRM8O00222 908 aa19.29■□□□□ 0.68
MBD1-227ENST00000592060 HDAC5Q9UQL6 1122 aa19.29■□□□□ 0.68
MBD1-227ENST00000592060 TRIM6-TRIM34B2RNG4 842 aa19.28■□□□□ 0.68
MBD1-227ENST00000592060 AIMP1Q12904 312 aaKnown RBP19.28■□□□□ 0.68
MBD1-227ENST00000592060 RAB3GAP1Q15042 981 aa19.28■□□□□ 0.68
MBD1-227ENST00000592060 RILPL2Q969X0 211 aa19.28■□□□□ 0.68
MBD1-227ENST00000592060 KAZALD1Q96I82 304 aa19.28■□□□□ 0.68
MBD1-227ENST00000592060 AFDNP55196 1824 aaKnown RBP19.28■□□□□ 0.68
MBD1-227ENST00000592060 IGKV5-2P06315 115 aa19.28■□□□□ 0.68
MBD1-227ENST00000592060 SNRPA1P09661 255 aaKnown RBP19.28■□□□□ 0.68
MBD1-227ENST00000592060 SUCLG2Q96I99 432 aa19.28■□□□□ 0.68
MBD1-227ENST00000592060 SLAIN2Q9P270 581 aa19.28■□□□□ 0.68
MBD1-227ENST00000592060 LARP1Q6PKG0 1096 aaKnown RBP19.27■□□□□ 0.68
MBD1-227ENST00000592060 XAGE3Q8WTP9 111 aa19.27■□□□□ 0.68
MBD1-227ENST00000592060 PRDM11Q9NQV5 511 aa19.27■□□□□ 0.68
MBD1-227ENST00000592060 TTC5Q8N0Z6 440 aa19.26■□□□□ 0.67
MBD1-227ENST00000592060 FMNL2Q96PY5 1086 aa19.26■□□□□ 0.67
MBD1-227ENST00000592060 HSP90AA1P07900 732 aaKnown RBP19.26■□□□□ 0.67
MBD1-227ENST00000592060 MYL6BP14649 208 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms